RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 RAI14Q9P0K7 980 aa17.3■□□□□ 0.36
PCDHGB1-202ENST00000611598 TACC3Q9Y6A5 838 aa17.3■□□□□ 0.36
PCDHGB1-202ENST00000611598 PKD1L3Q7Z443 1732 aa17.3■□□□□ 0.36
PCDHGB1-202ENST00000611598 ZNF532Q9HCE3 1301 aa17.3■□□□□ 0.36
PCDHGB1-202ENST00000611598 SARSP49591 514 aaKnown RBP17.3■□□□□ 0.36
PCDHGB1-202ENST00000611598 IFIT5Q13325 482 aaKnown RBP17.3■□□□□ 0.36
PCDHGB1-202ENST00000611598 MORC3Q14149 939 aa17.3■□□□□ 0.36
PCDHGB1-202ENST00000611598 ENOX1Q8TC92 643 aaKnown RBP17.3■□□□□ 0.36
PCDHGB1-202ENST00000611598 RABGGTAQ92696 567 aa17.3■□□□□ 0.36
PCDHGB1-202ENST00000611598 LZTFL1Q9NQ48 299 aa17.3■□□□□ 0.36
PCDHGB1-202ENST00000611598 TEX33O43247 280 aa17.29■□□□□ 0.36
PCDHGB1-202ENST00000611598 DIS3L2Q8IYB7 885 aaKnown RBP17.29■□□□□ 0.36
PCDHGB1-202ENST00000611598 CCDC82Q8N4S0 544 aa17.29■□□□□ 0.36
PCDHGB1-202ENST00000611598 GOLGA1Q92805 767 aa17.29■□□□□ 0.36
PCDHGB1-202ENST00000611598 WWC3Q9ULE0 1092 aa17.29■□□□□ 0.36
PCDHGB1-202ENST00000611598 MYO5AQ9Y4I1 1855 aaKnown RBP17.29■□□□□ 0.36
PCDHGB1-202ENST00000611598 CTDSPL2Q05D32 466 aa17.29■□□□□ 0.36
PCDHGB1-202ENST00000611598 SSRP1Q08945 709 aaKnown RBP17.29■□□□□ 0.36
PCDHGB1-202ENST00000611598 TCIRG1Q13488 830 aa17.29■□□□□ 0.36
PCDHGB1-202ENST00000611598 NT5DC1Q5TFE4 455 aa17.29■□□□□ 0.36
PCDHGB1-202ENST00000611598 CMTR1Q8N1G2 835 aaKnown RBP17.29■□□□□ 0.36
PCDHGB1-202ENST00000611598 MLKLQ8NB16 471 aa17.29■□□□□ 0.36
PCDHGB1-202ENST00000611598 TMEM87BQ96K49 555 aa17.29■□□□□ 0.36
PCDHGB1-202ENST00000611598 PCDHB6Q9Y5E3 794 aa17.29■□□□□ 0.36
PCDHGB1-202ENST00000611598 AKAP11Q9UKA4 1901 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 H3BQF6 201 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 ATP2B1P20020 1258 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 PTPREP23469 700 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 NR5A1Q13285 461 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 NR1I3Q14994 352 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 RAD9BQ6WBX8 426 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 SGMS1Q86VZ5 419 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 ZSWIM5Q9P217 1185 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 ABCC12Q96J65 1359 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 MMP1P03956 469 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 RAD51AP2Q09MP3 1159 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 LONRF2Q1L5Z9 754 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 PROSER2Q86WR7 435 aaPredicted RBP17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 NUTM2AQ8IVF1 878 aaPredicted RBP17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 HOOK1Q9UJC3 728 aaKnown RBP17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 RIPOR2Q9Y4F9 1068 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 SLC12A7Q9Y666 1083 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 KCPQ6ZWJ8 1503 aa17.28■□□□□ 0.36
PCDHGB1-202ENST00000611598 MST1RQ04912 1400 aa17.27■□□□□ 0.36
PCDHGB1-202ENST00000611598 IFIT3O14879 490 aaKnown RBP17.27■□□□□ 0.36
PCDHGB1-202ENST00000611598 FMNL1O95466 1100 aaPredicted RBP17.27■□□□□ 0.36
PCDHGB1-202ENST00000611598 TFRCP02786 760 aaKnown RBP17.27■□□□□ 0.36
PCDHGB1-202ENST00000611598 PDE6AP16499 860 aa17.27■□□□□ 0.36
PCDHGB1-202ENST00000611598 TXLNAP40222 546 aa17.27■□□□□ 0.36
PCDHGB1-202ENST00000611598 CPLX3Q8WVH0 158 aa17.27■□□□□ 0.36
PCDHGB1-202ENST00000611598 EPB41L4AQ9HCS5 686 aaPredicted RBP17.27■□□□□ 0.36
PCDHGB1-202ENST00000611598 PUF60Q9UHX1 559 aaKnown RBP17.27■□□□□ 0.36
PCDHGB1-202ENST00000611598 FBXO3Q9UK99 471 aa17.27■□□□□ 0.36
PCDHGB1-202ENST00000611598 ACTN4O43707 911 aaKnown RBP17.27■□□□□ 0.35
PCDHGB1-202ENST00000611598 LDHAL6AQ6ZMR3 332 aa17.27■□□□□ 0.35
PCDHGB1-202ENST00000611598 ELOA2Q8IYF1 753 aaPredicted RBP17.27■□□□□ 0.35
PCDHGB1-202ENST00000611598 TXLNBQ8N3L3 684 aa17.27■□□□□ 0.35
PCDHGB1-202ENST00000611598 ATRNO75882 1429 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 A0A1B0GTH6 734 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 VGLL3A8MV65 326 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 CSF1RP07333 972 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 CASP1P29466 404 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 APTXQ7Z2E3 356 aaKnown RBP17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 ZKSCAN3Q9BRR0 538 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 GREM2Q9H772 168 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 AKR1B15C9JRZ8 316 aaPredicted RBP17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 CCDC175P0C221 793 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 PHKA1P46020 1223 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 HSPA2P54652 639 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 STX17P56962 302 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 CHMP4BP1P59074 171 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 RBL2Q08999 1139 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 UBE3CQ15386 1083 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 KLHL10Q6JEL2 608 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 OXER1Q8TDS5 423 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 STRBPQ96SI9 672 aaKnown RBP17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 ADGRG1Q9Y653 693 aa17.26■□□□□ 0.35
PCDHGB1-202ENST00000611598 STK36Q9NRP7 1315 aa17.25■□□□□ 0.35
PCDHGB1-202ENST00000611598 TCRBV5S4A2TA0A5A2 114 aa17.25■□□□□ 0.35
PCDHGB1-202ENST00000611598 IFNAR1P17181 557 aa17.25■□□□□ 0.35
PCDHGB1-202ENST00000611598 PLCD1P51178 756 aa17.25■□□□□ 0.35
PCDHGB1-202ENST00000611598 CSRNP2Q9H175 543 aa17.25■□□□□ 0.35
PCDHGB1-202ENST00000611598 DACH1Q9UI36 760 aa17.25■□□□□ 0.35
PCDHGB1-202ENST00000611598 PCCAP05165 728 aaPredicted RBP17.25■□□□□ 0.35
PCDHGB1-202ENST00000611598 ITGA6P23229 1130 aa17.25■□□□□ 0.35
PCDHGB1-202ENST00000611598 AIDAQ96BJ3 306 aa17.25■□□□□ 0.35
PCDHGB1-202ENST00000611598 ANKZF1Q9H8Y5 726 aa17.25■□□□□ 0.35
PCDHGB1-202ENST00000611598 MAP3K15Q6ZN16 1313 aa17.24■□□□□ 0.35
PCDHGB1-202ENST00000611598 A0A087X0B3 334 aa17.24■□□□□ 0.35
PCDHGB1-202ENST00000611598 CCDC151A5D8V7 595 aa17.24■□□□□ 0.35
PCDHGB1-202ENST00000611598 CD44P16070 742 aaKnown RBP17.24■□□□□ 0.35
PCDHGB1-202ENST00000611598 LIFRP42702 1097 aa17.24■□□□□ 0.35
PCDHGB1-202ENST00000611598 SAFBQ15424 915 aaKnown RBP eCLIP17.24■□□□□ 0.35
PCDHGB1-202ENST00000611598 TTLL11Q8NHH1 800 aa17.24■□□□□ 0.35
PCDHGB1-202ENST00000611598 RRP12Q5JTH9 1297 aaKnown RBP17.24■□□□□ 0.35
PCDHGB1-202ENST00000611598 SRGAP1Q7Z6B7 1085 aa17.24■□□□□ 0.35
PCDHGB1-202ENST00000611598 IGSF22Q8N9C0 903 aa17.24■□□□□ 0.35
PCDHGB1-202ENST00000611598 PANX2Q96RD6 677 aa17.24■□□□□ 0.35
PCDHGB1-202ENST00000611598 PNKPQ96T60 521 aa17.24■□□□□ 0.35
PCDHGB1-202ENST00000611598 CNNM1Q9NRU3 951 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms