RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 PRMT2P55345 433 aa26.56■■□□□ 1.84
CBWD3-207ENST00000611426 EAF2Q96CJ1 260 aaPredicted RBP26.56■■□□□ 1.84
CBWD3-207ENST00000611426 TRIM75PA6NK02 468 aa26.55■■□□□ 1.84
CBWD3-207ENST00000611426 FMNL1O95466 1100 aaPredicted RBP26.55■■□□□ 1.84
CBWD3-207ENST00000611426 PLCG2P16885 1265 aa26.55■■□□□ 1.84
CBWD3-207ENST00000611426 ZAP70P43403 619 aa26.55■■□□□ 1.84
CBWD3-207ENST00000611426 PRPF38BQ5VTL8 546 aaKnown RBP26.55■■□□□ 1.84
CBWD3-207ENST00000611426 TLR7Q9NYK1 1049 aaKnown RBP26.55■■□□□ 1.84
CBWD3-207ENST00000611426 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.55■■□□□ 1.84
CBWD3-207ENST00000611426 COL2A1P02458 1487 aaPredicted RBP26.55■■□□□ 1.84
CBWD3-207ENST00000611426 BRCA2P51587 3418 aa26.55■■□□□ 1.84
CBWD3-207ENST00000611426 EN2P19622 333 aaPredicted RBP26.54■■□□□ 1.84
CBWD3-207ENST00000611426 HOXD10P28358 340 aa26.54■■□□□ 1.84
CBWD3-207ENST00000611426 CTGFP29279 349 aa26.54■■□□□ 1.84
CBWD3-207ENST00000611426 CCDC84Q86UT8 332 aaPredicted RBP26.54■■□□□ 1.84
CBWD3-207ENST00000611426 TRIM47Q96LD4 638 aa26.54■■□□□ 1.84
CBWD3-207ENST00000611426 RBBP6Q7Z6E9 1792 aaKnown RBP26.53■■□□□ 1.84
CBWD3-207ENST00000611426 IGSF3O75054 1194 aa26.53■■□□□ 1.84
CBWD3-207ENST00000611426 PPP4CP60510 307 aa26.53■■□□□ 1.84
CBWD3-207ENST00000611426 SH3TC2Q8TF17 1288 aa26.53■■□□□ 1.84
CBWD3-207ENST00000611426 EXOC6BQ9Y2D4 811 aa26.53■■□□□ 1.84
CBWD3-207ENST00000611426 PHIPQ8WWQ0 1821 aa26.52■■□□□ 1.84
CBWD3-207ENST00000611426 MYCP01106 439 aaPredicted RBP26.52■■□□□ 1.84
CBWD3-207ENST00000611426 SLC4A8Q2Y0W8 1093 aa26.52■■□□□ 1.84
CBWD3-207ENST00000611426 ADGRA1Q86SQ6 560 aa26.52■■□□□ 1.84
CBWD3-207ENST00000611426 ERC1Q8IUD2 1116 aa26.52■■□□□ 1.84
CBWD3-207ENST00000611426 TGFBRAP1Q8WUH2 860 aa26.52■■□□□ 1.84
CBWD3-207ENST00000611426 DHX36Q9H2U1 1008 aaKnown RBP26.52■■□□□ 1.84
CBWD3-207ENST00000611426 PIH1D3Q9NQM4 214 aaKnown RBP26.52■■□□□ 1.84
CBWD3-207ENST00000611426 PI4KBQ9UBF8 816 aa26.52■■□□□ 1.84
CBWD3-207ENST00000611426 SRRDQ9UH36 339 aa26.52■■□□□ 1.84
CBWD3-207ENST00000611426 SLC45A1Q9Y2W3 748 aa26.52■■□□□ 1.84
CBWD3-207ENST00000611426 BCRP11274 1271 aa26.51■■□□□ 1.83
CBWD3-207ENST00000611426 HERC5Q9UII4 1024 aaKnown RBP26.51■■□□□ 1.83
CBWD3-207ENST00000611426 MAST2Q6P0Q8 1798 aa26.51■■□□□ 1.83
CBWD3-207ENST00000611426 MKI67P46013 3256 aaKnown RBP26.5■■□□□ 1.83
CBWD3-207ENST00000611426 MYO5AQ9Y4I1 1855 aaKnown RBP26.5■■□□□ 1.83
CBWD3-207ENST00000611426 OSBPP22059 807 aa26.5■■□□□ 1.83
CBWD3-207ENST00000611426 CAP2P40123 477 aa26.5■■□□□ 1.83
CBWD3-207ENST00000611426 MAPKAPK5Q8IW41 473 aa26.5■■□□□ 1.83
CBWD3-207ENST00000611426 CCDC136Q96JN2 1154 aa26.5■■□□□ 1.83
CBWD3-207ENST00000611426 PTPRFP10586 1907 aa26.5■■□□□ 1.83
CBWD3-207ENST00000611426 SPP2Q13103 211 aa26.49■■□□□ 1.83
CBWD3-207ENST00000611426 RAET1EQ8TD07 263 aa26.49■■□□□ 1.83
CBWD3-207ENST00000611426 IDH1O75874 414 aaKnown RBP26.48■■□□□ 1.83
CBWD3-207ENST00000611426 CYP7A1P22680 504 aa26.48■■□□□ 1.83
CBWD3-207ENST00000611426 FCGRTP55899 365 aa26.48■■□□□ 1.83
CBWD3-207ENST00000611426 RRP1BQ14684 758 aaKnown RBP26.48■■□□□ 1.83
CBWD3-207ENST00000611426 HSP90AB4PQ58FF6 505 aa26.48■■□□□ 1.83
CBWD3-207ENST00000611426 B4GALNT3Q6L9W6 998 aa26.48■■□□□ 1.83
CBWD3-207ENST00000611426 AACSQ86V21 672 aa26.48■■□□□ 1.83
CBWD3-207ENST00000611426 ZNF280CQ8ND82 737 aa26.48■■□□□ 1.83
CBWD3-207ENST00000611426 SMCR8Q8TEV9 937 aaPredicted RBP26.48■■□□□ 1.83
CBWD3-207ENST00000611426 TBC1D2Q9BYX2 928 aa26.48■■□□□ 1.83
CBWD3-207ENST00000611426 AGTPBP1Q9UPW5 1226 aa26.48■■□□□ 1.83
CBWD3-207ENST00000611426 FLT1P17948 1338 aa26.47■■□□□ 1.83
CBWD3-207ENST00000611426 MYPNQ86TC9 1320 aa26.47■■□□□ 1.83
CBWD3-207ENST00000611426 USP17L5A8MUK1 530 aa26.46■■□□□ 1.83
CBWD3-207ENST00000611426 FOXP4Q8IVH2 680 aaPredicted RBP26.46■■□□□ 1.83
CBWD3-207ENST00000611426 TRIM34Q9BYJ4 488 aa26.46■■□□□ 1.83
CBWD3-207ENST00000611426 NDUFB9Q9Y6M9 179 aa26.46■■□□□ 1.83
CBWD3-207ENST00000611426 ATAD5Q96QE3 1844 aa26.46■■□□□ 1.83
CBWD3-207ENST00000611426 DYNLL1P63167 89 aaKnown RBP26.46■■□□□ 1.83
CBWD3-207ENST00000611426 TREML2Q5T2D2 321 aa26.46■■□□□ 1.83
CBWD3-207ENST00000611426 PROCA1Q8NCQ7 364 aaPredicted RBP26.46■■□□□ 1.83
CBWD3-207ENST00000611426 PNMA3Q9UL41 463 aa26.46■■□□□ 1.83
CBWD3-207ENST00000611426 PALD1Q9ULE6 856 aa26.46■■□□□ 1.83
CBWD3-207ENST00000611426 DDX19BQ9UMR2 479 aa26.46■■□□□ 1.83
CBWD3-207ENST00000611426 GRK4P32298 578 aa26.45■■□□□ 1.82
CBWD3-207ENST00000611426 RPAP2Q8IXW5 612 aaPredicted RBP26.45■■□□□ 1.82
CBWD3-207ENST00000611426 CRACR2BQ8N4Y2 399 aaPredicted RBP26.45■■□□□ 1.82
CBWD3-207ENST00000611426 RHPN1Q8TCX5 695 aa26.45■■□□□ 1.82
CBWD3-207ENST00000611426 AS3MTQ9HBK9 375 aa26.45■■□□□ 1.82
CBWD3-207ENST00000611426 IL1RAPL2Q9NP60 686 aa26.45■■□□□ 1.82
CBWD3-207ENST00000611426 COG6Q9Y2V7 657 aa26.45■■□□□ 1.82
CBWD3-207ENST00000611426 CDK5RAP2Q96SN8 1893 aa26.45■■□□□ 1.82
CBWD3-207ENST00000611426 SLC34A2O95436 690 aa26.44■■□□□ 1.82
CBWD3-207ENST00000611426 HMGCS2P54868 508 aa26.44■■□□□ 1.82
CBWD3-207ENST00000611426 PRKCZQ05513 592 aa26.44■■□□□ 1.82
CBWD3-207ENST00000611426 MAP3K12Q12852 859 aa26.44■■□□□ 1.82
CBWD3-207ENST00000611426 MAGEB6Q8N7X4 407 aa26.44■■□□□ 1.82
CBWD3-207ENST00000611426 MIGA1Q8NAN2 632 aa26.44■■□□□ 1.82
CBWD3-207ENST00000611426 ANTXR1Q9H6X2 564 aa26.44■■□□□ 1.82
CBWD3-207ENST00000611426 SAP30BPQ9UHR5 308 aaKnown RBP26.44■■□□□ 1.82
CBWD3-207ENST00000611426 MGAMO43451 1857 aa26.43■■□□□ 1.82
CBWD3-207ENST00000611426 METTL16Q86W50 562 aaKnown RBP26.43■■□□□ 1.82
CBWD3-207ENST00000611426 CERS3Q8IU89 383 aa26.43■■□□□ 1.82
CBWD3-207ENST00000611426 FOCADQ5VW36 1801 aa26.42■■□□□ 1.82
CBWD3-207ENST00000611426 SIPA1L1O43166 1804 aa26.42■■□□□ 1.82
CBWD3-207ENST00000611426 APBB1O00213 710 aa26.42■■□□□ 1.82
CBWD3-207ENST00000611426 HMMRO75330 724 aa26.42■■□□□ 1.82
CBWD3-207ENST00000611426 HLA-DOAP06340 250 aa26.42■■□□□ 1.82
CBWD3-207ENST00000611426 ASNSP08243 561 aa26.42■■□□□ 1.82
CBWD3-207ENST00000611426 PABPC4Q13310 644 aaKnown RBP eCLIP26.42■■□□□ 1.82
CBWD3-207ENST00000611426 ANKRD13CQ8N6S4 541 aa26.42■■□□□ 1.82
CBWD3-207ENST00000611426 BIN2Q9UBW5 565 aaPredicted RBP26.42■■□□□ 1.82
CBWD3-207ENST00000611426 USP5P45974 858 aa26.41■■□□□ 1.82
CBWD3-207ENST00000611426 MTFR1Q15390 333 aa26.41■■□□□ 1.82
CBWD3-207ENST00000611426 CLASRPQ8N2M8 674 aaKnown RBP26.41■■□□□ 1.82
CBWD3-207ENST00000611426 DNAJC18Q9H819 358 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms