RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 COL22A1Q8NFW1 1626 aaPredicted RBP13.63□□□□□ -0.23
TP53-220ENST00000610623 N4BP1O75113 896 aaKnown RBP13.62□□□□□ -0.23
TP53-220ENST00000610623 G3BP1Q13283 466 aaKnown RBP eCLIP13.62□□□□□ -0.232e-6■□□□□ 9.5
TP53-220ENST00000610623 CASP8Q14790 479 aa13.62□□□□□ -0.23
TP53-220ENST00000610623 AGXT2Q9BYV1 514 aa13.62□□□□□ -0.23
TP53-220ENST00000610623 ABCB6Q9NP58 842 aa13.62□□□□□ -0.23
TP53-220ENST00000610623 PLCH1Q4KWH8 1693 aa13.62□□□□□ -0.23
TP53-220ENST00000610623 AHDC1Q5TGY3 1603 aaPredicted RBP13.62□□□□□ -0.23
TP53-220ENST00000610623 RFX7Q2KHR2 1363 aa13.62□□□□□ -0.23
TP53-220ENST00000610623 SASH1O94885 1247 aa13.62□□□□□ -0.23
TP53-220ENST00000610623 CYP21A2P08686 494 aa13.62□□□□□ -0.23
TP53-220ENST00000610623 FOSBP53539 338 aa13.62□□□□□ -0.23
TP53-220ENST00000610623 TOGARAM2Q6ZUX3 1019 aa13.62□□□□□ -0.23
TP53-220ENST00000610623 EMILIN3Q9NT22 766 aa13.62□□□□□ -0.23
TP53-220ENST00000610623 PA2G4Q9UQ80 394 aaKnown RBP13.62□□□□□ -0.23
TP53-220ENST00000610623 WDHD1O75717 1129 aaPredicted RBP13.61□□□□□ -0.23
TP53-220ENST00000610623 CCDC172P0C7W6 258 aa13.61□□□□□ -0.23
TP53-220ENST00000610623 RPAINQ86UA6 219 aa13.61□□□□□ -0.23
TP53-220ENST00000610623 GPATCH11Q8N954 259 aa13.61□□□□□ -0.23
TP53-220ENST00000610623 TC2NQ8N9U0 490 aa13.61□□□□□ -0.23
TP53-220ENST00000610623 CCDC102AQ96A19 550 aa13.61□□□□□ -0.23
TP53-220ENST00000610623 CCDC8Q9H0W5 538 aaPredicted RBP13.61□□□□□ -0.23
TP53-220ENST00000610623 VIPAS39Q9H9C1 493 aa13.61□□□□□ -0.23
TP53-220ENST00000610623 TMEM232C9JQI7 657 aa13.61□□□□□ -0.23
TP53-220ENST00000610623 CCDC175P0C221 793 aa13.61□□□□□ -0.23
TP53-220ENST00000610623 SART3Q15020 963 aaKnown RBP13.61□□□□□ -0.23
TP53-220ENST00000610623 OLFM4Q6UX06 510 aa13.61□□□□□ -0.23
TP53-220ENST00000610623 BRAPQ7Z569 592 aa13.61□□□□□ -0.23
TP53-220ENST00000610623 ZNF274Q96GC6 653 aaPredicted RBP13.61□□□□□ -0.23
TP53-220ENST00000610623 PNKPQ96T60 521 aa13.61□□□□□ -0.23
TP53-220ENST00000610623 STRN4Q9NRL3 753 aa13.61□□□□□ -0.23
TP53-220ENST00000610623 CLIC4Q9Y696 253 aa13.61□□□□□ -0.23
TP53-220ENST00000610623 CARMIL3Q8ND23 1372 aa13.6□□□□□ -0.23
TP53-220ENST00000610623 APPP05067 770 aa13.6□□□□□ -0.23
TP53-220ENST00000610623 PFKFB1P16118 471 aa13.6□□□□□ -0.23
TP53-220ENST00000610623 GOLGA8FQ08AF8 430 aa13.6□□□□□ -0.23
TP53-220ENST00000610623 GOLGA8DPQ0D2H9 430 aa13.6□□□□□ -0.23
TP53-220ENST00000610623 SPECC1LQ69YQ0 1117 aa13.6□□□□□ -0.23
TP53-220ENST00000610623 PARP9Q8IXQ6 854 aa13.6□□□□□ -0.23
TP53-220ENST00000610623 CTCFLQ8NI51 663 aaPredicted RBP13.6□□□□□ -0.23
TP53-220ENST00000610623 FAM204AQ9H8W3 233 aa13.6□□□□□ -0.23
TP53-220ENST00000610623 CEP83Q9Y592 693 aa13.6□□□□□ -0.23
TP53-220ENST00000610623 ROBO1Q9Y6N7 1651 aa13.6□□□□□ -0.23
TP53-220ENST00000610623 USP8P40818 1118 aa13.59□□□□□ -0.23
TP53-220ENST00000610623 CXorf56Q9H5V9 222 aa13.59□□□□□ -0.23
TP53-220ENST00000610623 ZSWIM4Q9H7M6 989 aa13.59□□□□□ -0.23
TP53-220ENST00000610623 WNK3Q9BYP7 1800 aa13.59□□□□□ -0.23
TP53-220ENST00000610623 LRP6O75581 1613 aa13.59□□□□□ -0.23
TP53-220ENST00000610623 KIF5CO60282 957 aa13.59□□□□□ -0.23
TP53-220ENST00000610623 AARSP49588 968 aaKnown RBP eCLIP13.59□□□□□ -0.23
TP53-220ENST00000610623 EXOSC10Q01780 885 aaKnown RBP13.59□□□□□ -0.23
TP53-220ENST00000610623 GUCY1B3Q02153 619 aa13.59□□□□□ -0.23
TP53-220ENST00000610623 PPP1R15BQ5SWA1 713 aa13.59□□□□□ -0.23
TP53-220ENST00000610623 PDILTQ8N807 584 aa13.59□□□□□ -0.23
TP53-220ENST00000610623 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.235e-6■□□□□ 11.2
TP53-220ENST00000610623 LRRC2Q9BYS8 371 aa13.59□□□□□ -0.23
TP53-220ENST00000610623 INTS13Q9NVM9 706 aa13.59□□□□□ -0.23
TP53-220ENST00000610623 FANCLQ9NW38 375 aa13.59□□□□□ -0.23
TP53-220ENST00000610623 PUF60Q9UHX1 559 aaKnown RBP13.59□□□□□ -0.23
TP53-220ENST00000610623 CCDC196A0A1B0GTZ2 297 aa13.58□□□□□ -0.23
TP53-220ENST00000610623 KIF1CO43896 1103 aaKnown RBP13.58□□□□□ -0.23
TP53-220ENST00000610623 PIP4K2BP78356 416 aa13.58□□□□□ -0.23
TP53-220ENST00000610623 CCT2P78371 535 aaKnown RBP13.58□□□□□ -0.23
TP53-220ENST00000610623 CACNB1Q02641 598 aaPredicted RBP13.58□□□□□ -0.23
TP53-220ENST00000610623 RABL6Q3YEC7 729 aaPredicted RBP13.58□□□□□ -0.23
TP53-220ENST00000610623 TMCO4Q5TGY1 634 aa13.58□□□□□ -0.23
TP53-220ENST00000610623 MICALL1Q8N3F8 863 aa13.58□□□□□ -0.23
TP53-220ENST00000610623 AFAP1L1Q8TED9 768 aa13.58□□□□□ -0.23
TP53-220ENST00000610623 COPRSQ9NQ92 184 aa13.58□□□□□ -0.23
TP53-220ENST00000610623 DONSONQ9NYP3 566 aa13.58□□□□□ -0.23
TP53-220ENST00000610623 TJP1Q07157 1748 aa13.58□□□□□ -0.24
TP53-220ENST00000610623 ERLIN2O94905 339 aa13.58□□□□□ -0.24
TP53-220ENST00000610623 SYKP43405 635 aa13.58□□□□□ -0.24
TP53-220ENST00000610623 KARSQ15046 597 aaKnown RBP13.58□□□□□ -0.24
TP53-220ENST00000610623 MCMDC2Q4G0Z9 681 aa13.58□□□□□ -0.24
TP53-220ENST00000610623 MYSM1Q5VVJ2 828 aa13.58□□□□□ -0.24
TP53-220ENST00000610623 WDR93Q6P2C0 686 aa13.58□□□□□ -0.24
TP53-220ENST00000610623 SYNE3Q6ZMZ3 975 aa13.58□□□□□ -0.24
TP53-220ENST00000610623 SEC62Q99442 399 aaKnown RBP13.58□□□□□ -0.24
TP53-220ENST00000610623 NAA15Q9BXJ9 866 aaKnown RBP13.58□□□□□ -0.24
TP53-220ENST00000610623 TLR7Q9NYK1 1049 aaKnown RBP13.58□□□□□ -0.24
TP53-220ENST00000610623 PDIA3P30101 505 aaKnown RBP13.57□□□□□ -0.24
TP53-220ENST00000610623 MAP2K2P36507 400 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 ISM2Q6H9L7 571 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 ANKRD20A12PQ8NF67 263 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 KIF12Q96FN5 646 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 PANX2Q96RD6 677 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 MRPL44Q9H9J2 332 aaKnown RBP13.57□□□□□ -0.24
TP53-220ENST00000610623 SUGCTQ9HAC7 445 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 ITGB4P16144 1822 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 NBPF26B4DH59 902 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 ATP6V1AP38606 617 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 ADKP55263 362 aaKnown RBP13.57□□□□□ -0.24
TP53-220ENST00000610623 VSNL1P62760 191 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 WHAMMP3Q1A5X7 153 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 NBPF14Q5TI25 921 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 ANO1Q5XXA6 986 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 NBPF10Q6P3W6 841 aaKnown RBP13.57□□□□□ -0.24
TP53-220ENST00000610623 STOX1Q6ZVD7 989 aa13.57□□□□□ -0.24
TP53-220ENST00000610623 NBPF15Q8N660 670 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms