RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 CDC42EP5Q6NZY7 148 aa16.72■□□□□ 0.27
CTSA-218ENST00000607814 NECAB2Q7Z6G3 386 aa16.72■□□□□ 0.27
CTSA-218ENST00000607814 ANKLE1Q8NAG6 615 aa16.72■□□□□ 0.27
CTSA-218ENST00000607814 LRCH3Q96II8 777 aa16.72■□□□□ 0.27
CTSA-218ENST00000607814 DEFB118Q96PH6 123 aa16.72■□□□□ 0.27
CTSA-218ENST00000607814 GDF15Q99988 308 aa16.72■□□□□ 0.27
CTSA-218ENST00000607814 PICK1Q9NRD5 415 aa16.72■□□□□ 0.27
CTSA-218ENST00000607814 STAP2Q9UGK3 403 aa16.72■□□□□ 0.27
CTSA-218ENST00000607814 NOP58Q9Y2X3 529 aaKnown RBP16.72■□□□□ 0.27
CTSA-218ENST00000607814 DAGLAQ9Y4D2 1042 aa16.72■□□□□ 0.27
CTSA-218ENST00000607814 MYH13Q9UKX3 1938 aa16.72■□□□□ 0.27
CTSA-218ENST00000607814 ELNP15502 786 aa16.71■□□□□ 0.27
CTSA-218ENST00000607814 NFIAQ12857 509 aa16.71■□□□□ 0.27
CTSA-218ENST00000607814 SCYL3Q8IZE3 742 aa16.71■□□□□ 0.27
CTSA-218ENST00000607814 EAF2Q96CJ1 260 aaPredicted RBP16.71■□□□□ 0.27
CTSA-218ENST00000607814 IL1RAPL2Q9NP60 686 aa16.71■□□□□ 0.27
CTSA-218ENST00000607814 ZHX2Q9Y6X8 837 aa16.71■□□□□ 0.27
CTSA-218ENST00000607814 ATRNL1Q5VV63 1379 aa16.7■□□□□ 0.26
CTSA-218ENST00000607814 PHF20L1A8MW92 1017 aa16.7■□□□□ 0.26
CTSA-218ENST00000607814 SEMA3EO15041 775 aa16.7■□□□□ 0.26
CTSA-218ENST00000607814 PTPRAP18433 802 aa16.7■□□□□ 0.26
CTSA-218ENST00000607814 MCAMP43121 646 aa16.7■□□□□ 0.26
CTSA-218ENST00000607814 SPATA5Q8NB90 893 aa16.7■□□□□ 0.26
CTSA-218ENST00000607814 SMCR8Q8TEV9 937 aaPredicted RBP16.7■□□□□ 0.26
CTSA-218ENST00000607814 COA7Q96BR5 231 aa16.7■□□□□ 0.26
CTSA-218ENST00000607814 PAWRQ96IZ0 340 aaKnown RBP16.7■□□□□ 0.26
CTSA-218ENST00000607814 FAM198AQ9UFP1 575 aa16.7■□□□□ 0.26
CTSA-218ENST00000607814 AFG3L2Q9Y4W6 797 aa16.7■□□□□ 0.26
CTSA-218ENST00000607814 NDUFB9Q9Y6M9 179 aa16.7■□□□□ 0.26
CTSA-218ENST00000607814 MAP3K10Q02779 954 aa16.69■□□□□ 0.26
CTSA-218ENST00000607814 LRIT3Q3SXY7 679 aa16.69■□□□□ 0.26
CTSA-218ENST00000607814 TTC39AQ5SRH9 613 aa16.69■□□□□ 0.26
CTSA-218ENST00000607814 USP40Q9NVE5 1235 aa16.69■□□□□ 0.26
CTSA-218ENST00000607814 DBNLQ9UJU6 430 aaKnown RBP16.69■□□□□ 0.26
CTSA-218ENST00000607814 SALL1Q9NSC2 1324 aa16.69■□□□□ 0.26
CTSA-218ENST00000607814 ENTPD3O75355 529 aa16.68■□□□□ 0.26
CTSA-218ENST00000607814 ARID4AP29374 1257 aaPredicted RBP16.68■□□□□ 0.26
CTSA-218ENST00000607814 PDE3AQ14432 1141 aa16.68■□□□□ 0.26
CTSA-218ENST00000607814 GADL1Q6ZQY3 521 aa16.68■□□□□ 0.26
CTSA-218ENST00000607814 DZIP1Q86YF9 867 aaKnown RBP16.68■□□□□ 0.26
CTSA-218ENST00000607814 ZNF384Q8TF68 577 aa16.68■□□□□ 0.26
CTSA-218ENST00000607814 IDI2Q9BXS1 227 aa16.68■□□□□ 0.26
CTSA-218ENST00000607814 STXBP5LQ9Y2K9 1186 aa16.68■□□□□ 0.26
CTSA-218ENST00000607814 ALPK3Q96L96 1907 aa16.67■□□□□ 0.26
CTSA-218ENST00000607814 ZBTB22O15209 634 aa16.67■□□□□ 0.26
CTSA-218ENST00000607814 CTNND1O60716 968 aaKnown RBP16.67■□□□□ 0.26
CTSA-218ENST00000607814 MECOMQ03112 1051 aa16.67■□□□□ 0.26
CTSA-218ENST00000607814 FAM110CQ1W6H9 321 aa16.67■□□□□ 0.26
CTSA-218ENST00000607814 ERICH6Q7L0X2 663 aa16.67■□□□□ 0.26
CTSA-218ENST00000607814 AACSQ86V21 672 aa16.67■□□□□ 0.26
CTSA-218ENST00000607814 ZFPM1Q8IX07 1006 aa16.67■□□□□ 0.26
CTSA-218ENST00000607814 RPAP2Q8IXW5 612 aaPredicted RBP16.67■□□□□ 0.26
CTSA-218ENST00000607814 DEFB123Q8N688 67 aa16.67■□□□□ 0.26
CTSA-218ENST00000607814 RHPN1Q8TCX5 695 aa16.67■□□□□ 0.26
CTSA-218ENST00000607814 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.67■□□□□ 0.26
CTSA-218ENST00000607814 GPR108Q9NPR9 543 aa16.67■□□□□ 0.26
CTSA-218ENST00000607814 RAI14Q9P0K7 980 aa16.67■□□□□ 0.26
CTSA-218ENST00000607814 PNMA3Q9UL41 463 aa16.67■□□□□ 0.26
CTSA-218ENST00000607814 AGTPBP1Q9UPW5 1226 aa16.67■□□□□ 0.26
CTSA-218ENST00000607814 PTPRFP10586 1907 aa16.66■□□□□ 0.26
CTSA-218ENST00000607814 DOCK2Q92608 1830 aa16.66■□□□□ 0.26
CTSA-218ENST00000607814 ZAP70P43403 619 aa16.66■□□□□ 0.26
CTSA-218ENST00000607814 CCDC158Q5M9N0 1113 aa16.66■□□□□ 0.26
CTSA-218ENST00000607814 DOCK3Q8IZD9 2030 aa16.66■□□□□ 0.26
CTSA-218ENST00000607814 NBPF3Q9H094 633 aa16.66■□□□□ 0.26
CTSA-218ENST00000607814 LAMA2P24043 3122 aaKnown RBP16.65■□□□□ 0.26
CTSA-218ENST00000607814 HMGCRP04035 888 aa16.65■□□□□ 0.26
CTSA-218ENST00000607814 UQCRFS1P1P0C7P4 283 aa16.65■□□□□ 0.26
CTSA-218ENST00000607814 SLURP2P0DP57 97 aa16.65■□□□□ 0.26
CTSA-218ENST00000607814 BTDP43251 543 aa16.65■□□□□ 0.26
CTSA-218ENST00000607814 ZGPATQ8N5A5 531 aaKnown RBP16.65■□□□□ 0.26
CTSA-218ENST00000607814 SMARCA5O60264 1052 aaPredicted RBP16.64■□□□□ 0.25
CTSA-218ENST00000607814 CYP2E1P05181 493 aaPredicted RBP16.64■□□□□ 0.25
CTSA-218ENST00000607814 GCLCP48506 637 aaPredicted RBP16.64■□□□□ 0.25
CTSA-218ENST00000607814 RGS3P49796 1198 aa16.64■□□□□ 0.25
CTSA-218ENST00000607814 RRP1P56182 461 aaKnown RBP16.64■□□□□ 0.25
CTSA-218ENST00000607814 SPTY2D1Q68D10 685 aaPredicted RBP16.64■□□□□ 0.25
CTSA-218ENST00000607814 C7orf61Q8IZ16 206 aa16.64■□□□□ 0.25
CTSA-218ENST00000607814 TDHQ8IZJ6 230 aa16.64■□□□□ 0.25
CTSA-218ENST00000607814 ANKRD13CQ8N6S4 541 aa16.64■□□□□ 0.25
CTSA-218ENST00000607814 PROCA1Q8NCQ7 364 aaPredicted RBP16.64■□□□□ 0.25
CTSA-218ENST00000607814 DIS3LQ8TF46 1054 aaKnown RBP16.64■□□□□ 0.25
CTSA-218ENST00000607814 NSUN4Q96CB9 384 aaKnown RBP16.64■□□□□ 0.25
CTSA-218ENST00000607814 PIH1D3Q9NQM4 214 aaKnown RBP16.64■□□□□ 0.25
CTSA-218ENST00000607814 LRP2BPQ9P2M1 347 aa16.64■□□□□ 0.25
CTSA-218ENST00000607814 TAOK2Q9UL54 1235 aa16.64■□□□□ 0.25
CTSA-218ENST00000607814 RPTORQ8N122 1335 aa16.64■□□□□ 0.25
CTSA-218ENST00000607814 RFX7Q2KHR2 1363 aa16.64■□□□□ 0.25
CTSA-218ENST00000607814 DOCK1Q14185 1865 aa16.63■□□□□ 0.25
CTSA-218ENST00000607814 MYH2Q9UKX2 1941 aa16.63■□□□□ 0.25
CTSA-218ENST00000607814 HMMRO75330 724 aa16.63■□□□□ 0.25
CTSA-218ENST00000607814 PICALMQ13492 652 aa16.63■□□□□ 0.25
CTSA-218ENST00000607814 ERC1Q8IUD2 1116 aa16.63■□□□□ 0.25
CTSA-218ENST00000607814 SLF2Q8IX21 1173 aa16.63■□□□□ 0.25
CTSA-218ENST00000607814 TBC1D2Q9BYX2 928 aa16.63■□□□□ 0.25
CTSA-218ENST00000607814 ANTXR1Q9H6X2 564 aa16.63■□□□□ 0.25
CTSA-218ENST00000607814 HMX1Q9NP08 348 aaPredicted RBP16.63■□□□□ 0.25
CTSA-218ENST00000607814 GAKO14976 1311 aa16.63■□□□□ 0.25
CTSA-218ENST00000607814 PDS5AQ29RF7 1337 aaKnown RBP16.63■□□□□ 0.25
CTSA-218ENST00000607814 PHIPQ8WWQ0 1821 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms