RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 ZNF341Q9BYN7 854 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 AATFQ9NY61 560 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC01001-203ENST00000607448 ZNF112Q9UJU3 913 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 BRPF3Q9ULD4 1205 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 NAV1Q8NEY1 1877 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
LINC01001-203ENST00000607448 FAM196BA6NMK8 535 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 TRAK2O60296 914 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 REC8O95072 547 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 HSP90AA1P07900 732 aaKnown RBP12.64□□□□□ -0.39
LINC01001-203ENST00000607448 BRI3BPQ8WY22 251 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 CFHR5Q9BXR6 569 aa12.64□□□□□ -0.39
LINC01001-203ENST00000607448 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.64□□□□□ -0.39
LINC01001-203ENST00000607448 GOLGA6L3A6NEY3 463 aa12.63□□□□□ -0.39
LINC01001-203ENST00000607448 PHF20L1A8MW92 1017 aa12.63□□□□□ -0.39
LINC01001-203ENST00000607448 GPR25O00155 361 aa12.63□□□□□ -0.39
LINC01001-203ENST00000607448 IRF6O14896 467 aa12.63□□□□□ -0.39
LINC01001-203ENST00000607448 LDHCP07864 332 aa12.63□□□□□ -0.39
LINC01001-203ENST00000607448 INHBEP58166 350 aa12.63□□□□□ -0.39
LINC01001-203ENST00000607448 GSTO1P78417 241 aa12.63□□□□□ -0.39
LINC01001-203ENST00000607448 HSP90AB4PQ58FF6 505 aa12.63□□□□□ -0.39
LINC01001-203ENST00000607448 NAA16Q6N069 864 aaPredicted RBP12.63□□□□□ -0.39
LINC01001-203ENST00000607448 ERO1BQ86YB8 467 aa12.63□□□□□ -0.39
LINC01001-203ENST00000607448 ZSCAN29Q8IWY8 852 aaPredicted RBP12.63□□□□□ -0.39
LINC01001-203ENST00000607448 HOOK2Q96ED9 719 aa12.63□□□□□ -0.39
LINC01001-203ENST00000607448 KIF1BPQ96EK5 621 aa12.63□□□□□ -0.39
LINC01001-203ENST00000607448 USP26Q9BXU7 913 aa12.63□□□□□ -0.39
LINC01001-203ENST00000607448 CCL15-CCL14A0A0B4J2E2 113 aa12.62□□□□□ -0.39
LINC01001-203ENST00000607448 FSD2A1L4K1 749 aa12.62□□□□□ -0.39
LINC01001-203ENST00000607448 SMARCA5O60264 1052 aaPredicted RBP12.62□□□□□ -0.39
LINC01001-203ENST00000607448 SDSP20132 328 aa12.62□□□□□ -0.39
LINC01001-203ENST00000607448 DYNLL1P63167 89 aaKnown RBP12.62□□□□□ -0.39
LINC01001-203ENST00000607448 CAP1Q01518 475 aa12.62□□□□□ -0.39
LINC01001-203ENST00000607448 CRHR2Q13324 411 aa12.62□□□□□ -0.39
LINC01001-203ENST00000607448 CCL15Q16663 113 aa12.62□□□□□ -0.39
LINC01001-203ENST00000607448 CLEC17AQ6ZS10 378 aa12.62□□□□□ -0.39
LINC01001-203ENST00000607448 TEX11Q8IYF3 940 aa12.62□□□□□ -0.39
LINC01001-203ENST00000607448 FAM43AQ8N2R8 423 aa12.62□□□□□ -0.39
LINC01001-203ENST00000607448 OSBPL5Q9H0X9 879 aaPredicted RBP12.62□□□□□ -0.39
LINC01001-203ENST00000607448 COL2A1P02458 1487 aaPredicted RBP12.62□□□□□ -0.39
LINC01001-203ENST00000607448 IDH1O75874 414 aaKnown RBP12.61□□□□□ -0.39
LINC01001-203ENST00000607448 MAP3K10Q02779 954 aa12.61□□□□□ -0.39
LINC01001-203ENST00000607448 CLASRPQ8N2M8 674 aaKnown RBP12.61□□□□□ -0.39
LINC01001-203ENST00000607448 TNPO1Q92973 898 aaKnown RBP12.61□□□□□ -0.39
LINC01001-203ENST00000607448 EDC3Q96F86 508 aaKnown RBP12.61□□□□□ -0.39
LINC01001-203ENST00000607448 BAZ2AQ9UIF9 1905 aaKnown RBP12.61□□□□□ -0.39
LINC01001-203ENST00000607448 RAB11FIP3O75154 756 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 ALDH1A1P00352 501 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 GTF2A2P52657 109 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 PPATQ06203 517 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 PPIL2Q13356 520 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 RRP1BQ14684 758 aaKnown RBP12.6□□□□□ -0.39
LINC01001-203ENST00000607448 NOL9Q5SY16 702 aaKnown RBP12.6□□□□□ -0.39
LINC01001-203ENST00000607448 CCDC84Q86UT8 332 aaPredicted RBP12.6□□□□□ -0.39
LINC01001-203ENST00000607448 MAPKAPK5Q8IW41 473 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 MAGEB6Q8N7X4 407 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 MIGA1Q8NAN2 632 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 FLT1P17948 1338 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 LOC285556D6RIA3 1793 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 BTBD19C9JJ37 291 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 GOLGA6L22H0YM25 854 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 ERC2O15083 957 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 ST18O60284 1047 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 NPM3O75607 178 aaKnown RBP12.6□□□□□ -0.39
LINC01001-203ENST00000607448 IFIT2P09913 472 aaKnown RBP12.6□□□□□ -0.39
LINC01001-203ENST00000607448 CYP7A1P22680 504 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 PPP4CP60510 307 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 SLC4A8Q2Y0W8 1093 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 CTU1Q7Z7A3 348 aaKnown RBP12.6□□□□□ -0.39
LINC01001-203ENST00000607448 TGFBRAP1Q8WUH2 860 aa12.6□□□□□ -0.39
LINC01001-203ENST00000607448 DNAJC2Q99543 621 aaKnown RBP12.6□□□□□ -0.39
LINC01001-203ENST00000607448 CWC22Q9HCG8 908 aaKnown RBP12.6□□□□□ -0.39
LINC01001-203ENST00000607448 MYH8P13535 1937 aa12.59□□□□□ -0.39
LINC01001-203ENST00000607448 MGAMO43451 1857 aa12.59□□□□□ -0.39
LINC01001-203ENST00000607448 CCDC85CA6NKD9 419 aa12.59□□□□□ -0.39
LINC01001-203ENST00000607448 FKTNO75072 461 aa12.59□□□□□ -0.39
LINC01001-203ENST00000607448 CHGBP05060 677 aa12.59□□□□□ -0.39
LINC01001-203ENST00000607448 MRE11P49959 708 aa12.59□□□□□ -0.39
LINC01001-203ENST00000607448 PDE1AP54750 535 aa12.59□□□□□ -0.39
LINC01001-203ENST00000607448 NUCB2P80303 420 aa12.59□□□□□ -0.39
LINC01001-203ENST00000607448 MOGSQ13724 837 aa12.59□□□□□ -0.39
LINC01001-203ENST00000607448 SLFNL1Q499Z3 407 aa12.59□□□□□ -0.39
LINC01001-203ENST00000607448 NOM1Q5C9Z4 860 aaKnown RBP12.59□□□□□ -0.39
LINC01001-203ENST00000607448 SCYL3Q8IZE3 742 aa12.59□□□□□ -0.39
LINC01001-203ENST00000607448 LRRCC1Q9C099 1032 aa12.59□□□□□ -0.39
LINC01001-203ENST00000607448 TNRC18O15417 2968 aaPredicted RBP12.59□□□□□ -0.39
LINC01001-203ENST00000607448 SALL3Q9BXA9 1300 aa12.58□□□□□ -0.4
LINC01001-203ENST00000607448 GOLIM4O00461 696 aa12.58□□□□□ -0.4
LINC01001-203ENST00000607448 EPB41L2O43491 1005 aaKnown RBP12.58□□□□□ -0.4
LINC01001-203ENST00000607448 BAG3O95817 575 aa12.58□□□□□ -0.4
LINC01001-203ENST00000607448 PTPRAP18433 802 aa12.58□□□□□ -0.4
LINC01001-203ENST00000607448 SNAPC2Q13487 334 aa12.58□□□□□ -0.4
LINC01001-203ENST00000607448 TAF1CQ15572 869 aaPredicted RBP12.58□□□□□ -0.4
LINC01001-203ENST00000607448 SHROOM1Q2M3G4 852 aaPredicted RBP12.58□□□□□ -0.4
LINC01001-203ENST00000607448 OTUD7AQ8TE49 926 aaPredicted RBP12.58□□□□□ -0.4
LINC01001-203ENST00000607448 NOL10Q9BSC4 688 aaKnown RBP12.58□□□□□ -0.4
LINC01001-203ENST00000607448 BOLA2Q9H3K6 86 aa12.58□□□□□ -0.4
LINC01001-203ENST00000607448 DNAJC18Q9H819 358 aa12.58□□□□□ -0.4
LINC01001-203ENST00000607448 KCNH4Q9UQ05 1017 aa12.58□□□□□ -0.4
LINC01001-203ENST00000607448 CD2BP2O95400 341 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms