RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 ANTXR1Q9H6X2 564 aa17.47■□□□□ 0.39
PKNOX1-210ENST00000607049 EFCC1Q9HA90 598 aa17.47■□□□□ 0.39
PKNOX1-210ENST00000607049 NDUFB9Q9Y6M9 179 aa17.47■□□□□ 0.39
PKNOX1-210ENST00000607049 FLT1P17948 1338 aa17.47■□□□□ 0.39
PKNOX1-210ENST00000607049 PDHXO00330 501 aa17.46■□□□□ 0.39
PKNOX1-210ENST00000607049 TLR2O60603 784 aa17.46■□□□□ 0.39
PKNOX1-210ENST00000607049 ATP5JP18859 108 aa17.46■□□□□ 0.39
PKNOX1-210ENST00000607049 PARK7Q99497 189 aaKnown RBP17.46■□□□□ 0.39
PKNOX1-210ENST00000607049 AS3MTQ9HBK9 375 aa17.46■□□□□ 0.39
PKNOX1-210ENST00000607049 HPS5Q9UPZ3 1129 aa17.46■□□□□ 0.39
PKNOX1-210ENST00000607049 MAGEB6P1A0A0J9YX57 407 aa17.45■□□□□ 0.38
PKNOX1-210ENST00000607049 ZSCAN25Q6NSZ9 544 aa17.45■□□□□ 0.38
PKNOX1-210ENST00000607049 TTC6Q86TZ1 520 aa17.45■□□□□ 0.38
PKNOX1-210ENST00000607049 CD99L2Q8TCZ2 262 aa17.45■□□□□ 0.38
PKNOX1-210ENST00000607049 CRNKL1Q9BZJ0 848 aaKnown RBP17.45■□□□□ 0.38
PKNOX1-210ENST00000607049 BOLA2Q9H3K6 86 aa17.45■□□□□ 0.38
PKNOX1-210ENST00000607049 PAG1Q9NWQ8 432 aa17.45■□□□□ 0.38
PKNOX1-210ENST00000607049 AFG3L2Q9Y4W6 797 aa17.45■□□□□ 0.38
PKNOX1-210ENST00000607049 MAST2Q6P0Q8 1798 aa17.45■□□□□ 0.38
PKNOX1-210ENST00000607049 DOCK2Q92608 1830 aa17.44■□□□□ 0.38
PKNOX1-210ENST00000607049 TRIM75PA6NK02 468 aa17.44■□□□□ 0.38
PKNOX1-210ENST00000607049 ASNSP08243 561 aa17.44■□□□□ 0.38
PKNOX1-210ENST00000607049 CAP2P40123 477 aa17.44■□□□□ 0.38
PKNOX1-210ENST00000607049 DYNLL1P63167 89 aaKnown RBP17.44■□□□□ 0.38
PKNOX1-210ENST00000607049 GADL1Q6ZQY3 521 aa17.44■□□□□ 0.38
PKNOX1-210ENST00000607049 OTOP1Q7RTM1 612 aa17.44■□□□□ 0.38
PKNOX1-210ENST00000607049 DCTPP1Q9H773 170 aa17.44■□□□□ 0.38
PKNOX1-210ENST00000607049 GINM1Q9NU53 330 aa17.44■□□□□ 0.38
PKNOX1-210ENST00000607049 SAP30BPQ9UHR5 308 aaKnown RBP17.44■□□□□ 0.38
PKNOX1-210ENST00000607049 PALD1Q9ULE6 856 aa17.44■□□□□ 0.38
PKNOX1-210ENST00000607049 LAMB1P07942 1786 aa17.43■□□□□ 0.38
PKNOX1-210ENST00000607049 A0A0G2JLL6 359 aaPredicted RBP17.43■□□□□ 0.38
PKNOX1-210ENST00000607049 FAM196BA6NMK8 535 aa17.43■□□□□ 0.38
PKNOX1-210ENST00000607049 USP17L5A8MUK1 530 aa17.43■□□□□ 0.38
PKNOX1-210ENST00000607049 GNRH1P01148 92 aa17.43■□□□□ 0.38
PKNOX1-210ENST00000607049 PDE6AP16499 860 aa17.43■□□□□ 0.38
PKNOX1-210ENST00000607049 PABPC4Q13310 644 aaKnown RBP eCLIP17.43■□□□□ 0.38
PKNOX1-210ENST00000607049 PRRT2Q7Z6L0 340 aaPredicted RBP17.43■□□□□ 0.38
PKNOX1-210ENST00000607049 ZNF280CQ8ND82 737 aa17.43■□□□□ 0.38
PKNOX1-210ENST00000607049 HAUS7Q99871 368 aa17.43■□□□□ 0.38
PKNOX1-210ENST00000607049 ECHDC1Q9NTX5 307 aa17.43■□□□□ 0.38
PKNOX1-210ENST00000607049 SLC45A1Q9Y2W3 748 aa17.43■□□□□ 0.38
PKNOX1-210ENST00000607049 DDRGK1Q96HY6 314 aa17.42■□□□□ 0.38
PKNOX1-210ENST00000607049 PNMA3Q9UL41 463 aa17.42■□□□□ 0.38
PKNOX1-210ENST00000607049 ZNF532Q9HCE3 1301 aa17.42■□□□□ 0.38
PKNOX1-210ENST00000607049 SMARCA5O60264 1052 aaPredicted RBP17.41■□□□□ 0.38
PKNOX1-210ENST00000607049 POLR3DP05423 398 aaPredicted RBP17.41■□□□□ 0.38
PKNOX1-210ENST00000607049 HOXD10P28358 340 aa17.41■□□□□ 0.38
PKNOX1-210ENST00000607049 MLLT1Q03111 559 aaPredicted RBP17.41■□□□□ 0.38
PKNOX1-210ENST00000607049 SPP2Q13103 211 aa17.41■□□□□ 0.38
PKNOX1-210ENST00000607049 AAMPQ13685 434 aa17.41■□□□□ 0.38
PKNOX1-210ENST00000607049 AMOTL1Q8IY63 956 aa17.41■□□□□ 0.38
PKNOX1-210ENST00000607049 SMCR8Q8TEV9 937 aaPredicted RBP17.41■□□□□ 0.38
PKNOX1-210ENST00000607049 SERPINB13Q9UIV8 391 aa17.41■□□□□ 0.38
PKNOX1-210ENST00000607049 PTPN22Q9Y2R2 807 aa17.41■□□□□ 0.38
PKNOX1-210ENST00000607049 PRMT2P55345 433 aa17.4■□□□□ 0.38
PKNOX1-210ENST00000607049 LACTBP83111 547 aaPredicted RBP17.4■□□□□ 0.38
PKNOX1-210ENST00000607049 LRRFIP1Q32MZ4 808 aaKnown RBP17.4■□□□□ 0.38
PKNOX1-210ENST00000607049 NBPF11Q86T75 865 aa17.4■□□□□ 0.38
PKNOX1-210ENST00000607049 METTL16Q86W50 562 aaKnown RBP17.4■□□□□ 0.38
PKNOX1-210ENST00000607049 PROCA1Q8NCQ7 364 aaPredicted RBP17.4■□□□□ 0.38
PKNOX1-210ENST00000607049 EHD4Q9H223 541 aa17.4■□□□□ 0.38
PKNOX1-210ENST00000607049 TMOD4Q9NZQ9 345 aa17.4■□□□□ 0.38
PKNOX1-210ENST00000607049 CPA4Q9UI42 421 aa17.4■□□□□ 0.38
PKNOX1-210ENST00000607049 SLURP2P0DP57 97 aa17.39■□□□□ 0.37
PKNOX1-210ENST00000607049 C17orf99Q6UX52 265 aa17.39■□□□□ 0.37
PKNOX1-210ENST00000607049 RIOK1Q9BRS2 568 aaKnown RBP17.39■□□□□ 0.37
PKNOX1-210ENST00000607049 AGTPBP1Q9UPW5 1226 aa17.39■□□□□ 0.37
PKNOX1-210ENST00000607049 ERC2O15083 957 aa17.38■□□□□ 0.37
PKNOX1-210ENST00000607049 OSBPP22059 807 aa17.38■□□□□ 0.37
PKNOX1-210ENST00000607049 ADD2P35612 726 aa17.38■□□□□ 0.37
PKNOX1-210ENST00000607049 RGS19P49795 217 aa17.38■□□□□ 0.37
PKNOX1-210ENST00000607049 MOGSQ13724 837 aa17.38■□□□□ 0.37
PKNOX1-210ENST00000607049 UBE3CQ15386 1083 aa17.38■□□□□ 0.37
PKNOX1-210ENST00000607049 SLC4A8Q2Y0W8 1093 aa17.38■□□□□ 0.37
PKNOX1-210ENST00000607049 GPAT2Q6NUI2 795 aa17.38■□□□□ 0.37
PKNOX1-210ENST00000607049 WDR18Q9BV38 432 aa17.38■□□□□ 0.37
PKNOX1-210ENST00000607049 CABP5Q9NP86 173 aa17.38■□□□□ 0.37
PKNOX1-210ENST00000607049 MCM9Q9NXL9 1143 aa17.38■□□□□ 0.37
PKNOX1-210ENST00000607049 TAOK2Q9UL54 1235 aa17.38■□□□□ 0.37
PKNOX1-210ENST00000607049 C19orf81C9J6K1 198 aa17.37■□□□□ 0.37
PKNOX1-210ENST00000607049 FMNL1O95466 1100 aaPredicted RBP17.37■□□□□ 0.37
PKNOX1-210ENST00000607049 CYP2C8P10632 490 aa17.37■□□□□ 0.37
PKNOX1-210ENST00000607049 SOX10P56693 466 aa17.37■□□□□ 0.37
PKNOX1-210ENST00000607049 EDC3Q96F86 508 aaKnown RBP17.37■□□□□ 0.37
PKNOX1-210ENST00000607049 CRBNQ96SW2 442 aa17.37■□□□□ 0.37
PKNOX1-210ENST00000607049 PCDHB15Q9Y5E8 787 aa17.37■□□□□ 0.37
PKNOX1-210ENST00000607049 DOCK1Q14185 1865 aa17.36■□□□□ 0.37
PKNOX1-210ENST00000607049 TCRBV5S4A2TA0A5A2 114 aa17.36■□□□□ 0.37
PKNOX1-210ENST00000607049 USP17L10C9JJH3 530 aa17.36■□□□□ 0.37
PKNOX1-210ENST00000607049 GDF11O95390 407 aa17.36■□□□□ 0.37
PKNOX1-210ENST00000607049 PSMC4P43686 418 aa17.36■□□□□ 0.37
PKNOX1-210ENST00000607049 HMGCS2P54868 508 aa17.36■□□□□ 0.37
PKNOX1-210ENST00000607049 FCGRTP55899 365 aa17.36■□□□□ 0.37
PKNOX1-210ENST00000607049 BACE1P56817 501 aa17.36■□□□□ 0.37
PKNOX1-210ENST00000607049 CERKLQ49MI3 558 aaPredicted RBP17.36■□□□□ 0.37
PKNOX1-210ENST00000607049 SLC9C1Q4G0N8 1177 aa17.36■□□□□ 0.37
PKNOX1-210ENST00000607049 CCDC84Q86UT8 332 aaPredicted RBP17.36■□□□□ 0.37
PKNOX1-210ENST00000607049 ATP8A2Q9NTI2 1148 aa17.36■□□□□ 0.37
PKNOX1-210ENST00000607049 ZBTB21Q9ULJ3 1066 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms