RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 APOBRQ0VD83 1088 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 PIN1Q13526 163 aaPredicted RBP6.72□□□□□ -1.33
TUBE1-209ENST00000604814 LARP1BQ659C4 914 aaKnown RBP6.72□□□□□ -1.33
TUBE1-209ENST00000604814 CCDC70Q6NSX1 233 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 ERAP2Q6P179 960 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 SPATC1Q76KD6 591 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 SDR16C5Q8N3Y7 309 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 CDH19Q9H159 772 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 GOLGA6AQ9NYA3 693 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 PTMAP06454 111 aaKnown RBP6.72□□□□□ -1.33
TUBE1-209ENST00000604814 CALRP27797 417 aaKnown RBP6.72□□□□□ -1.33
TUBE1-209ENST00000604814 INPP5BP32019 993 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 SSRP1Q08945 709 aaKnown RBP6.72□□□□□ -1.33
TUBE1-209ENST00000604814 CCDC85BQ15834 202 aaPredicted RBP6.72□□□□□ -1.33
TUBE1-209ENST00000604814 PERM1Q5SV97 790 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 SLCO4C1Q6ZQN7 724 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 C1orf229Q6ZS94 237 aaPredicted RBP6.72□□□□□ -1.33
TUBE1-209ENST00000604814 PODNQ7Z5L7 613 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 RNF180Q86T96 592 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 ENOX1Q8TC92 643 aaKnown RBP6.72□□□□□ -1.33
TUBE1-209ENST00000604814 BHMTQ93088 406 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 PNMA5Q96PV4 448 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 BCO2Q9BYV7 579 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 AASDHPPTQ9NRN7 309 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 LRRC4BQ9NT99 713 aa6.72□□□□□ -1.33
TUBE1-209ENST00000604814 SUPT16HQ9Y5B9 1047 aaKnown RBP6.72□□□□□ -1.33
TUBE1-209ENST00000604814 DYTNA2CJ06 578 aa6.71□□□□□ -1.34
TUBE1-209ENST00000604814 F2P00734 622 aa6.71□□□□□ -1.34
TUBE1-209ENST00000604814 FAM160A1Q05DH4 1040 aa6.71□□□□□ -1.34
TUBE1-209ENST00000604814 SIM2Q14190 667 aaPredicted RBP6.71□□□□□ -1.34
TUBE1-209ENST00000604814 GFOD2Q3B7J2 385 aa6.71□□□□□ -1.34
TUBE1-209ENST00000604814 FAM83BQ5T0W9 1011 aa6.71□□□□□ -1.34
TUBE1-209ENST00000604814 ANO1Q5XXA6 986 aa6.71□□□□□ -1.34
TUBE1-209ENST00000604814 IL31Q6EBC2 164 aa6.71□□□□□ -1.34
TUBE1-209ENST00000604814 DGKHQ86XP1 1220 aa6.71□□□□□ -1.34
TUBE1-209ENST00000604814 TCEAL8Q8IYN2 117 aa6.71□□□□□ -1.34
TUBE1-209ENST00000604814 PPP2R3BQ9Y5P8 575 aa6.71□□□□□ -1.34
TUBE1-209ENST00000604814 PRPF3O43395 683 aaKnown RBP6.7□□□□□ -1.34
TUBE1-209ENST00000604814 TCEA3O75764 348 aa6.7□□□□□ -1.34
TUBE1-209ENST00000604814 NBPF7P0C2Y1 421 aaPredicted RBP6.7□□□□□ -1.34
TUBE1-209ENST00000604814 EPXP11678 715 aa6.7□□□□□ -1.34
TUBE1-209ENST00000604814 PPM1FP49593 454 aaPredicted RBP6.7□□□□□ -1.34
TUBE1-209ENST00000604814 NEK3P51956 506 aa6.7□□□□□ -1.34
TUBE1-209ENST00000604814 EIF6P56537 245 aaKnown RBP6.7□□□□□ -1.34
TUBE1-209ENST00000604814 CCINQ13939 588 aa6.7□□□□□ -1.34
TUBE1-209ENST00000604814 FAM102BQ5T8I3 360 aa6.7□□□□□ -1.34
TUBE1-209ENST00000604814 SMAP1Q8IYB5 467 aaPredicted RBP6.7□□□□□ -1.34
TUBE1-209ENST00000604814 CPXCR1Q8N123 301 aa6.7□□□□□ -1.34
TUBE1-209ENST00000604814 CMTR1Q8N1G2 835 aaKnown RBP6.7□□□□□ -1.34
TUBE1-209ENST00000604814 FBXO41Q8TF61 875 aa6.7□□□□□ -1.34
TUBE1-209ENST00000604814 MTMR8Q96EF0 704 aa6.7□□□□□ -1.34
TUBE1-209ENST00000604814 CDC5LQ99459 802 aaKnown RBP6.7□□□□□ -1.34
TUBE1-209ENST00000604814 RTFDC1Q9BY42 306 aaPredicted RBP6.7□□□□□ -1.34
TUBE1-209ENST00000604814 RRAGCQ9HB90 399 aa6.7□□□□□ -1.34
TUBE1-209ENST00000604814 NPHS2Q9NP85 383 aa6.7□□□□□ -1.34
TUBE1-209ENST00000604814 FOXD3Q9UJU5 478 aaPredicted RBP6.7□□□□□ -1.34
TUBE1-209ENST00000604814 USP20Q9Y2K6 914 aa6.7□□□□□ -1.34
TUBE1-209ENST00000604814 SHISA8B8ZZ34 492 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 TBC1D8BQ0IIM8 1120 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 FXNQ16595 210 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 ALFQ53S48 1182 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 AKAP4Q5JQC9 854 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 NXNQ6DKJ4 435 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 PRPF40BQ6NWY9 871 aaKnown RBP6.69□□□□□ -1.34
TUBE1-209ENST00000604814 FCHSD1Q86WN1 690 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 AFAP1L2Q8N4X5 818 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 ANKRD42Q8N9B4 389 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 ZSWIM2Q8NEG5 633 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 NKD1Q969G9 470 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 HOOK2Q96ED9 719 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 IGFLR1Q9H665 355 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 RTCBQ9Y3I0 505 aaKnown RBP6.69□□□□□ -1.34
TUBE1-209ENST00000604814 SIN3BO75182 1162 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 GJB6O95452 261 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 ALAS2P22557 587 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 GSTT1P30711 240 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 PURAQ00577 322 aaKnown RBP6.69□□□□□ -1.34
TUBE1-209ENST00000604814 ITKQ08881 620 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 MTMR1Q13613 665 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 CNGB1Q14028 1251 aaPredicted RBP6.69□□□□□ -1.34
TUBE1-209ENST00000604814 MAP3K11Q16584 847 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 SLC4A8Q2Y0W8 1093 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 CCDC184Q52MB2 194 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 FBXW10Q5XX13 1052 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 KRT25Q7Z3Z0 450 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 MAGEB6Q8N7X4 407 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 GSX2Q9BZM3 304 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 LUZP4Q9P127 313 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 ZNF69Q9UC07 566 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 USP25Q9UHP3 1055 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 ZMYM5Q9UJ78 669 aa6.69□□□□□ -1.34
TUBE1-209ENST00000604814 E2F8A0AVK6 867 aa6.68□□□□□ -1.34
TUBE1-209ENST00000604814 GADD45BO75293 160 aaPredicted RBP6.68□□□□□ -1.34
TUBE1-209ENST00000604814 CRKP46108 304 aa6.68□□□□□ -1.34
TUBE1-209ENST00000604814 PABPC4Q13310 644 aaKnown RBP eCLIP6.68□□□□□ -1.34
TUBE1-209ENST00000604814 PICALMQ13492 652 aa6.68□□□□□ -1.34
TUBE1-209ENST00000604814 CCDC89Q8N998 374 aa6.68□□□□□ -1.34
TUBE1-209ENST00000604814 RIN3Q8TB24 985 aa6.68□□□□□ -1.34
TUBE1-209ENST00000604814 SCARF2Q96GP6 870 aaPredicted RBP6.68□□□□□ -1.34
TUBE1-209ENST00000604814 BTBD6Q96KE9 485 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms