RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 MAPKAPK5Q8IW41 473 aa13.97□□□□□ -0.17
CCDC12-209ENST00000604164 BRI3BPQ8WY22 251 aa13.97□□□□□ -0.17
CCDC12-209ENST00000604164 GINM1Q9NU53 330 aa13.97□□□□□ -0.17
CCDC12-209ENST00000604164 KCNH4Q9UQ05 1017 aa13.97□□□□□ -0.17
CCDC12-209ENST00000604164 TTC41PQ6P2S7 1318 aa13.96□□□□□ -0.17
CCDC12-209ENST00000604164 ZNF532Q9HCE3 1301 aa13.96□□□□□ -0.17
CCDC12-209ENST00000604164 PTPRAP18433 802 aa13.96□□□□□ -0.17
CCDC12-209ENST00000604164 DYNLL1P63167 89 aaKnown RBP13.96□□□□□ -0.17
CCDC12-209ENST00000604164 TAF1CQ15572 869 aaPredicted RBP13.96□□□□□ -0.17
CCDC12-209ENST00000604164 FASTKD5Q7L8L6 764 aaKnown RBP13.96□□□□□ -0.17
CCDC12-209ENST00000604164 TTC6Q86TZ1 520 aa13.96□□□□□ -0.17
CCDC12-209ENST00000604164 ZNF296Q8WUU4 475 aaPredicted RBP13.96□□□□□ -0.17
CCDC12-209ENST00000604164 PTPN18Q99952 460 aa13.96□□□□□ -0.17
CCDC12-209ENST00000604164 RWDD1Q9H446 243 aaPredicted RBP13.96□□□□□ -0.17
CCDC12-209ENST00000604164 TAOK2Q9UL54 1235 aa13.96□□□□□ -0.17
CCDC12-209ENST00000604164 ZHX2Q9Y6X8 837 aa13.96□□□□□ -0.17
CCDC12-209ENST00000604164 ADD2P35612 726 aa13.95□□□□□ -0.18
CCDC12-209ENST00000604164 CRHR2Q13324 411 aa13.95□□□□□ -0.18
CCDC12-209ENST00000604164 UBE3CQ15386 1083 aa13.95□□□□□ -0.18
CCDC12-209ENST00000604164 ANKRD23Q86SG2 305 aa13.95□□□□□ -0.18
CCDC12-209ENST00000604164 METTL16Q86W50 562 aaKnown RBP13.95□□□□□ -0.18
CCDC12-209ENST00000604164 ERO1AQ96HE7 468 aa13.95□□□□□ -0.18
CCDC12-209ENST00000604164 DDRGK1Q96HY6 314 aa13.95□□□□□ -0.18
CCDC12-209ENST00000604164 RIOK1Q9BRS2 568 aaKnown RBP13.95□□□□□ -0.18
CCDC12-209ENST00000604164 AS3MTQ9HBK9 375 aa13.95□□□□□ -0.18
CCDC12-209ENST00000604164 PALD1Q9ULE6 856 aa13.95□□□□□ -0.18
CCDC12-209ENST00000604164 TCRBV5S4A2TA0A5A2 114 aa13.94□□□□□ -0.18
CCDC12-209ENST00000604164 BTBD19C9JJ37 291 aa13.94□□□□□ -0.18
CCDC12-209ENST00000604164 GLRX3O76003 335 aaKnown RBP13.94□□□□□ -0.18
CCDC12-209ENST00000604164 ZFYP08048 801 aaPredicted RBP13.94□□□□□ -0.18
CCDC12-209ENST00000604164 ASNSP08243 561 aa13.94□□□□□ -0.18
CCDC12-209ENST00000604164 CAP2P40123 477 aa13.94□□□□□ -0.18
CCDC12-209ENST00000604164 AMOTL1Q8IY63 956 aa13.94□□□□□ -0.18
CCDC12-209ENST00000604164 ABHD8Q96I13 439 aa13.94□□□□□ -0.18
CCDC12-209ENST00000604164 MCOLN1Q9GZU1 580 aa13.94□□□□□ -0.18
CCDC12-209ENST00000604164 EHD4Q9H223 541 aa13.94□□□□□ -0.18
CCDC12-209ENST00000604164 SAP30BPQ9UHR5 308 aaKnown RBP13.94□□□□□ -0.18
CCDC12-209ENST00000604164 CASP8AP2Q9UKL3 1982 aa13.94□□□□□ -0.18
CCDC12-209ENST00000604164 USP17L5A8MUK1 530 aa13.93□□□□□ -0.18
CCDC12-209ENST00000604164 POLR3DP05423 398 aaPredicted RBP13.93□□□□□ -0.18
CCDC12-209ENST00000604164 ANKRD45Q5TZF3 282 aa13.93□□□□□ -0.18
CCDC12-209ENST00000604164 FAM43AQ8N2R8 423 aa13.93□□□□□ -0.18
CCDC12-209ENST00000604164 EDC3Q96F86 508 aaKnown RBP13.93□□□□□ -0.18
CCDC12-209ENST00000604164 ATP8A2Q9NTI2 1148 aa13.93□□□□□ -0.18
CCDC12-209ENST00000604164 SERPINB13Q9UIV8 391 aa13.93□□□□□ -0.18
CCDC12-209ENST00000604164 AFG3L2Q9Y4W6 797 aa13.93□□□□□ -0.18
CCDC12-209ENST00000604164 SUPT16HQ9Y5B9 1047 aaKnown RBP13.93□□□□□ -0.18
CCDC12-209ENST00000604164 MYO5AQ9Y4I1 1855 aaKnown RBP13.93□□□□□ -0.18
CCDC12-209ENST00000604164 A0A0G2JLL6 359 aaPredicted RBP13.92□□□□□ -0.18
CCDC12-209ENST00000604164 FAM196BA6NMK8 535 aa13.92□□□□□ -0.18
CCDC12-209ENST00000604164 MX1P20591 662 aa13.92□□□□□ -0.18
CCDC12-209ENST00000604164 SP3Q02447 781 aa13.92□□□□□ -0.18
CCDC12-209ENST00000604164 KIF22Q14807 665 aa13.92□□□□□ -0.18
CCDC12-209ENST00000604164 PRRT2Q7Z6L0 340 aaPredicted RBP13.92□□□□□ -0.18
CCDC12-209ENST00000604164 KBTBD3Q8NAB2 608 aa13.92□□□□□ -0.18
CCDC12-209ENST00000604164 PARK7Q99497 189 aaKnown RBP13.92□□□□□ -0.18
CCDC12-209ENST00000604164 SLC45A1Q9Y2W3 748 aa13.92□□□□□ -0.18
CCDC12-209ENST00000604164 FOCADQ5VW36 1801 aa13.92□□□□□ -0.18
CCDC12-209ENST00000604164 DOCK1Q14185 1865 aa13.91□□□□□ -0.18
CCDC12-209ENST00000604164 TRIM75PA6NK02 468 aa13.91□□□□□ -0.18
CCDC12-209ENST00000604164 PDHXO00330 501 aa13.91□□□□□ -0.18
CCDC12-209ENST00000604164 TLR2O60603 784 aa13.91□□□□□ -0.18
CCDC12-209ENST00000604164 PABPC4Q13310 644 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCDC12-209ENST00000604164 ZNF280CQ8ND82 737 aa13.91□□□□□ -0.18
CCDC12-209ENST00000604164 R3HDMLQ9H3Y0 253 aa13.91□□□□□ -0.18
CCDC12-209ENST00000604164 MCM9Q9NXL9 1143 aa13.91□□□□□ -0.18
CCDC12-209ENST00000604164 CAPN15O75808 1086 aa13.9□□□□□ -0.18
CCDC12-209ENST00000604164 MBD4O95243 580 aa13.9□□□□□ -0.18
CCDC12-209ENST00000604164 GADL1Q6ZQY3 521 aa13.9□□□□□ -0.18
CCDC12-209ENST00000604164 LCORLQ8N3X6 602 aa13.9□□□□□ -0.18
CCDC12-209ENST00000604164 PROCA1Q8NCQ7 364 aaPredicted RBP13.9□□□□□ -0.18
CCDC12-209ENST00000604164 WDR18Q9BV38 432 aa13.9□□□□□ -0.18
CCDC12-209ENST00000604164 PNMA3Q9UL41 463 aa13.9□□□□□ -0.18
CCDC12-209ENST00000604164 C19orf81C9J6K1 198 aa13.89□□□□□ -0.19
CCDC12-209ENST00000604164 RNF113AO15541 343 aaKnown RBP13.89□□□□□ -0.19
CCDC12-209ENST00000604164 GNRH1P01148 92 aa13.89□□□□□ -0.19
CCDC12-209ENST00000604164 GNAT2P19087 354 aa13.89□□□□□ -0.19
CCDC12-209ENST00000604164 SPP2Q13103 211 aa13.89□□□□□ -0.19
CCDC12-209ENST00000604164 TATDN1Q6P1N9 297 aa13.89□□□□□ -0.19
CCDC12-209ENST00000604164 FBXO46Q6PJ61 603 aaPredicted RBP13.89□□□□□ -0.19
CCDC12-209ENST00000604164 TICAM2Q86XR7 235 aa13.89□□□□□ -0.19
CCDC12-209ENST00000604164 EXOC6Q8TAG9 804 aa13.89□□□□□ -0.19
CCDC12-209ENST00000604164 APPBP2Q92624 585 aa13.89□□□□□ -0.19
CCDC12-209ENST00000604164 ARMT1Q9H993 441 aa13.89□□□□□ -0.19
CCDC12-209ENST00000604164 CABP5Q9NP86 173 aa13.89□□□□□ -0.19
CCDC12-209ENST00000604164 DCP1AQ9NPI6 582 aaPredicted RBP13.89□□□□□ -0.19
CCDC12-209ENST00000604164 SWAP70Q9UH65 585 aa13.89□□□□□ -0.19
CCDC12-209ENST00000604164 AGTPBP1Q9UPW5 1226 aa13.89□□□□□ -0.19
CCDC12-209ENST00000604164 CCDC85CA6NKD9 419 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 SLURP2P0DP57 97 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 MOGSQ13724 837 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 SLC4A8Q2Y0W8 1093 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 CERKLQ49MI3 558 aaPredicted RBP13.88□□□□□ -0.19
CCDC12-209ENST00000604164 TSHZ3Q63HK5 1081 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 GIMAP6Q6P9H5 292 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 SMC5Q8IY18 1101 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 PI4K2BQ8TCG2 481 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 SDR42E1Q8WUS8 393 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 DNAJC18Q9H819 358 aa13.88□□□□□ -0.19
CCDC12-209ENST00000604164 EFCC1Q9HA90 598 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms