RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ZNF280CQ8ND82 737 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 UHMK1Q8TAS1 419 aaKnown RBP9.98□□□□□ -0.81
COMMD3-215ENST00000602574 UIMC1Q96RL1 719 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 OSBPL10Q9BXB5 764 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 TANGO6Q9C0B7 1094 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 MYO1AQ9UBC5 1043 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 ZMAT5Q9UDW3 170 aaKnown RBP9.98□□□□□ -0.81
COMMD3-215ENST00000602574 CFDP1Q9UEE9 299 aaPredicted RBP9.98□□□□□ -0.81
COMMD3-215ENST00000602574 ASB3Q9Y575 518 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 WDR7Q9Y4E6 1490 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 PALM3A6NDB9 673 aaPredicted RBP9.98□□□□□ -0.81
COMMD3-215ENST00000602574 ST18O60284 1047 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 ENPP1P22413 925 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 TXLNAP40222 546 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 SH3BGRP55822 239 aaPredicted RBP9.98□□□□□ -0.81
COMMD3-215ENST00000602574 PPP4CP60510 307 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 MECOMQ03112 1051 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 UBE2Q1Q7Z7E8 422 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 FAM228AQ86W67 206 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 DRC7Q8IY82 874 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 KRI1Q8N9T8 703 aaKnown RBP9.98□□□□□ -0.81
COMMD3-215ENST00000602574 SLC43A3Q8NBI5 491 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 RBM33Q96EV2 1170 aaKnown RBP9.98□□□□□ -0.81
COMMD3-215ENST00000602574 TCHPQ9BT92 498 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 CAPS2Q9BXY5 557 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 MRPL46Q9H2W6 279 aaKnown RBP9.98□□□□□ -0.81
COMMD3-215ENST00000602574 MKS1Q9NXB0 559 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 ZFATQ9P243 1243 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 L1RE1Q9UN81 338 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.98□□□□□ -0.81
COMMD3-215ENST00000602574 DAAM1Q9Y4D1 1078 aa9.98□□□□□ -0.81
COMMD3-215ENST00000602574 POLR3AO14802 1390 aaPredicted RBP9.97□□□□□ -0.81
COMMD3-215ENST00000602574 SENP3-EIF4A1A0A087X0R7 540 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 TRIM64CA6NLI5 447 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 TTI1O43156 1089 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 PRPF6O94906 941 aaKnown RBP9.97□□□□□ -0.81
COMMD3-215ENST00000602574 ALDH3A1P30838 453 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 SMUG1Q53HV7 270 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 NBPF14Q5TI25 921 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 GALNT17Q6IS24 598 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 SLC15A3Q8IY34 581 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 SREK1Q8WXA9 508 aaKnown RBP9.97□□□□□ -0.81
COMMD3-215ENST00000602574 GOLGA1Q92805 767 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 CNKSR1Q969H4 720 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 GCC1Q96CN9 775 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 CDK5RAP3Q96JB5 506 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 UPF3BQ9BZI7 483 aaKnown RBP9.97□□□□□ -0.81
COMMD3-215ENST00000602574 SEL1LQ9UBV2 794 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 ZNF148Q9UQR1 794 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 C15orf41Q9Y2V0 281 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 A2MP01023 1474 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 MYOM1P52179 1685 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 ABCC11Q96J66 1382 aa9.97□□□□□ -0.81
COMMD3-215ENST00000602574 RASSF10A6NK89 507 aa9.96□□□□□ -0.81
COMMD3-215ENST00000602574 MCM2P49736 904 aa9.96□□□□□ -0.81
COMMD3-215ENST00000602574 CTAG1AP78358 180 aa9.96□□□□□ -0.81
COMMD3-215ENST00000602574 INAQ16352 499 aa9.96□□□□□ -0.81
COMMD3-215ENST00000602574 NAA16Q6N069 864 aaPredicted RBP9.96□□□□□ -0.81
COMMD3-215ENST00000602574 PRPF40BQ6NWY9 871 aaKnown RBP9.96□□□□□ -0.81
COMMD3-215ENST00000602574 CYB5D1Q6P9G0 228 aa9.96□□□□□ -0.81
COMMD3-215ENST00000602574 MSANTD4Q8NCY6 345 aa9.96□□□□□ -0.81
COMMD3-215ENST00000602574 TEKT4Q8WW24 435 aa9.96□□□□□ -0.81
COMMD3-215ENST00000602574 CTNNBL1Q8WYA6 563 aaPredicted RBP9.96□□□□□ -0.81
COMMD3-215ENST00000602574 OPTNQ96CV9 577 aa9.96□□□□□ -0.81
COMMD3-215ENST00000602574 INTS4Q96HW7 963 aaKnown RBP9.96□□□□□ -0.81
COMMD3-215ENST00000602574 TESK2Q96S53 571 aa9.96□□□□□ -0.81
COMMD3-215ENST00000602574 GALNT8Q9NY28 637 aa9.96□□□□□ -0.81
COMMD3-215ENST00000602574 C6orf203Q9P0P8 240 aaPredicted RBP9.96□□□□□ -0.81
COMMD3-215ENST00000602574 DKK3Q9UBP4 350 aa9.96□□□□□ -0.81
COMMD3-215ENST00000602574 SPHKAPQ2M3C7 1700 aa9.96□□□□□ -0.81
COMMD3-215ENST00000602574 MAGI2Q86UL8 1455 aa9.96□□□□□ -0.81
COMMD3-215ENST00000602574 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.96□□□□□ -0.82
COMMD3-215ENST00000602574 P4HA2O15460 535 aa9.96□□□□□ -0.82
COMMD3-215ENST00000602574 ABL1P00519 1130 aa9.96□□□□□ -0.82
COMMD3-215ENST00000602574 ATP4AP20648 1035 aa9.96□□□□□ -0.82
COMMD3-215ENST00000602574 NUCB1Q02818 461 aa9.96□□□□□ -0.82
COMMD3-215ENST00000602574 SGSM1Q2NKQ1 1148 aa9.96□□□□□ -0.82
COMMD3-215ENST00000602574 SPDYCQ5MJ68 293 aa9.96□□□□□ -0.82
COMMD3-215ENST00000602574 PDILTQ8N807 584 aa9.96□□□□□ -0.82
COMMD3-215ENST00000602574 GABPB2Q8TAK5 448 aaPredicted RBP9.96□□□□□ -0.82
COMMD3-215ENST00000602574 MAIP1Q8WWC4 291 aa9.96□□□□□ -0.82
COMMD3-215ENST00000602574 MPHOSPH8Q99549 860 aa9.96□□□□□ -0.82
COMMD3-215ENST00000602574 VCX3BQ9H321 246 aa9.96□□□□□ -0.82
COMMD3-215ENST00000602574 NLRP2Q9NX02 1062 aa9.96□□□□□ -0.82
COMMD3-215ENST00000602574 TPCN1Q9ULQ1 816 aa9.96□□□□□ -0.82
COMMD3-215ENST00000602574 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.96□□□□□ -0.82
COMMD3-215ENST00000602574 TTC37Q6PGP7 1564 aa9.96□□□□□ -0.82
COMMD3-215ENST00000602574 CDHR2Q9BYE9 1310 aa9.96□□□□□ -0.82
COMMD3-215ENST00000602574 SRRM3A6NNA2 597 aaPredicted RBP9.95□□□□□ -0.82
COMMD3-215ENST00000602574 TBKBP1A7MCY6 615 aa9.95□□□□□ -0.82
COMMD3-215ENST00000602574 EIF3HO15372 352 aaKnown RBP eCLIP9.95□□□□□ -0.82
COMMD3-215ENST00000602574 SMIM24O75264 130 aa9.95□□□□□ -0.82
COMMD3-215ENST00000602574 MAP4K4O95819 1239 aaPredicted RBP9.95□□□□□ -0.82
COMMD3-215ENST00000602574 TSPY4P0CV99 314 aa9.95□□□□□ -0.82
COMMD3-215ENST00000602574 TSPY10P0CW01 314 aa9.95□□□□□ -0.82
COMMD3-215ENST00000602574 ATICP31939 592 aa9.95□□□□□ -0.82
COMMD3-215ENST00000602574 CCT6AP40227 531 aaKnown RBP9.95□□□□□ -0.82
COMMD3-215ENST00000602574 PPFIA1Q13136 1202 aa9.95□□□□□ -0.82
COMMD3-215ENST00000602574 ARHGEF6Q15052 776 aa9.95□□□□□ -0.82
COMMD3-215ENST00000602574 MAATS1Q7Z4T9 603 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms