RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-231ENST00000602190 GCLCP48506 637 aaPredicted RBP22.74■■□□□ 1.23
IRF3-231ENST00000602190 STAP2Q9UGK3 403 aa22.74■■□□□ 1.23
IRF3-231ENST00000602190 PA2G4Q9UQ80 394 aaKnown RBP22.74■■□□□ 1.23
IRF3-231ENST00000602190 CDK5RAP2Q96SN8 1893 aa22.73■■□□□ 1.23
IRF3-231ENST00000602190 HMGCRP04035 888 aa22.73■■□□□ 1.23
IRF3-231ENST00000602190 NECAB2Q7Z6G3 386 aa22.73■■□□□ 1.23
IRF3-231ENST00000602190 DZIP1Q86YF9 867 aaKnown RBP22.73■■□□□ 1.23
IRF3-231ENST00000602190 ZSCAN29Q8IWY8 852 aaPredicted RBP22.73■■□□□ 1.23
IRF3-231ENST00000602190 FAM9BQ8IZU0 186 aa22.73■■□□□ 1.23
IRF3-231ENST00000602190 MORF4L1Q9UBU8 362 aa22.73■■□□□ 1.23
IRF3-231ENST00000602190 FOCADQ5VW36 1801 aa22.73■■□□□ 1.23
IRF3-231ENST00000602190 MECOMQ03112 1051 aa22.72■■□□□ 1.23
IRF3-231ENST00000602190 RRP1BQ14684 758 aaKnown RBP22.72■■□□□ 1.23
IRF3-231ENST00000602190 MAP3K21Q5TCX8 1036 aa22.72■■□□□ 1.23
IRF3-231ENST00000602190 SPTY2D1Q68D10 685 aaPredicted RBP22.72■■□□□ 1.23
IRF3-231ENST00000602190 TRMT2AQ8IZ69 625 aaKnown RBP22.72■■□□□ 1.23
IRF3-231ENST00000602190 MTX1Q13505 466 aa22.71■■□□□ 1.23
IRF3-231ENST00000602190 ZNF280CQ8ND82 737 aa22.71■■□□□ 1.23
IRF3-231ENST00000602190 SLC17A8Q8NDX2 589 aa22.71■■□□□ 1.23
IRF3-231ENST00000602190 OGDHLQ9ULD0 1010 aa22.71■■□□□ 1.23
IRF3-231ENST00000602190 RPTORQ8N122 1335 aa22.71■■□□□ 1.23
IRF3-231ENST00000602190 DLL1O00548 723 aa22.7■■□□□ 1.22
IRF3-231ENST00000602190 CAP2P40123 477 aa22.7■■□□□ 1.22
IRF3-231ENST00000602190 TIMM10P62072 90 aa22.7■■□□□ 1.22
IRF3-231ENST00000602190 SPP2Q13103 211 aa22.7■■□□□ 1.22
IRF3-231ENST00000602190 PICALMQ13492 652 aa22.7■■□□□ 1.22
IRF3-231ENST00000602190 LRIT3Q3SXY7 679 aa22.7■■□□□ 1.22
IRF3-231ENST00000602190 ABCF2Q9UG63 623 aa22.7■■□□□ 1.22
IRF3-231ENST00000602190 MAST2Q6P0Q8 1798 aa22.7■■□□□ 1.22
IRF3-231ENST00000602190 A0A1B0GUL7 405 aa22.69■■□□□ 1.22
IRF3-231ENST00000602190 NSUN4Q96CB9 384 aaKnown RBP22.69■■□□□ 1.22
IRF3-231ENST00000602190 XAGE2Q96GT9 111 aa22.69■■□□□ 1.22
IRF3-231ENST00000602190 ASCC2Q9H1I8 757 aaPredicted RBP22.69■■□□□ 1.22
IRF3-231ENST00000602190 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.69■■□□□ 1.22
IRF3-231ENST00000602190 FAM196BA6NMK8 535 aa22.68■■□□□ 1.22
IRF3-231ENST00000602190 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.68■■□□□ 1.22
IRF3-231ENST00000602190 HDAC5Q9UQL6 1122 aa22.68■■□□□ 1.22
IRF3-231ENST00000602190 FRMPD3Q5JV73 1810 aa22.68■■□□□ 1.22
IRF3-231ENST00000602190 HOXA7P31268 230 aaPredicted RBP22.67■■□□□ 1.22
IRF3-231ENST00000602190 HMGCS2P54868 508 aa22.67■■□□□ 1.22
IRF3-231ENST00000602190 TRIM32Q13049 653 aa22.67■■□□□ 1.22
IRF3-231ENST00000602190 PABPC4Q13310 644 aaKnown RBP eCLIP22.67■■□□□ 1.222e-7■■■■■ 31.9
IRF3-231ENST00000602190 MVPQ14764 893 aaKnown RBP22.67■■□□□ 1.22
IRF3-231ENST00000602190 ERICH6Q7L0X2 663 aa22.67■■□□□ 1.22
IRF3-231ENST00000602190 METTL16Q86W50 562 aaKnown RBP22.67■■□□□ 1.22
IRF3-231ENST00000602190 TRIB2Q92519 343 aa22.67■■□□□ 1.22
IRF3-231ENST00000602190 MEIS3Q99687 375 aa22.67■■□□□ 1.22
IRF3-231ENST00000602190 WDR18Q9BV38 432 aa22.67■■□□□ 1.22
IRF3-231ENST00000602190 NBPF3Q9H094 633 aa22.67■■□□□ 1.22
IRF3-231ENST00000602190 HMX1Q9NP08 348 aaPredicted RBP22.67■■□□□ 1.22
IRF3-231ENST00000602190 SMC4Q9NTJ3 1288 aa22.67■■□□□ 1.22
IRF3-231ENST00000602190 HMG20BQ9P0W2 317 aa22.67■■□□□ 1.22
IRF3-231ENST00000602190 HERC5Q9UII4 1024 aaKnown RBP22.67■■□□□ 1.22
IRF3-231ENST00000602190 USP17L5A8MUK1 530 aa22.66■■□□□ 1.22
IRF3-231ENST00000602190 CT47B1P0C2W7 299 aaPredicted RBP22.66■■□□□ 1.22
IRF3-231ENST00000602190 XRCC5P13010 732 aaKnown RBP22.66■■□□□ 1.22
IRF3-231ENST00000602190 ARID4AP29374 1257 aaPredicted RBP22.66■■□□□ 1.22
IRF3-231ENST00000602190 AKAP2Q9Y2D5 859 aa22.66■■□□□ 1.22
IRF3-231ENST00000602190 PFASO15067 1338 aa22.65■■□□□ 1.22
IRF3-231ENST00000602190 COL6A1P12109 1028 aa22.65■■□□□ 1.22
IRF3-231ENST00000602190 USP6NLQ92738 828 aa22.65■■□□□ 1.22
IRF3-231ENST00000602190 LDHCP07864 332 aa22.64■■□□□ 1.21
IRF3-231ENST00000602190 TFCP2Q12800 502 aa22.64■■□□□ 1.21
IRF3-231ENST00000602190 C7orf61Q8IZ16 206 aa22.64■■□□□ 1.21
IRF3-231ENST00000602190 GSTO1P78417 241 aa22.63■■□□□ 1.21
IRF3-231ENST00000602190 PI16Q6UXB8 463 aa22.63■■□□□ 1.21
IRF3-231ENST00000602190 SPATA5Q8NB90 893 aa22.63■■□□□ 1.21
IRF3-231ENST00000602190 API5Q9BZZ5 524 aaKnown RBP22.63■■□□□ 1.21
IRF3-231ENST00000602190 C11orf49Q9H6J7 331 aa22.63■■□□□ 1.21
IRF3-231ENST00000602190 DNAJC18Q9H819 358 aa22.63■■□□□ 1.21
IRF3-231ENST00000602190 ZMYND8Q9ULU4 1186 aaPredicted RBP22.63■■□□□ 1.21
IRF3-231ENST00000602190 NOB1Q9ULX3 412 aaKnown RBP22.63■■□□□ 1.21
IRF3-231ENST00000602190 MAGEA10P43363 369 aaPredicted RBP22.62■■□□□ 1.21
IRF3-231ENST00000602190 BACE1P56817 501 aa22.62■■□□□ 1.21
IRF3-231ENST00000602190 TDHQ8IZJ6 230 aa22.62■■□□□ 1.21
IRF3-231ENST00000602190 CDCA7LQ96GN5 454 aa22.62■■□□□ 1.21
IRF3-231ENST00000602190 TXNRD2Q9NNW7 524 aa22.62■■□□□ 1.21
IRF3-231ENST00000602190 TAOK2Q9UL54 1235 aa22.62■■□□□ 1.21
IRF3-231ENST00000602190 STXBP5LQ9Y2K9 1186 aa22.62■■□□□ 1.21
IRF3-231ENST00000602190 JAG1P78504 1218 aa22.61■■□□□ 1.21
IRF3-231ENST00000602190 POTEEQ6S8J3 1075 aa22.61■■□□□ 1.21
IRF3-231ENST00000602190 SOCS4Q8WXH5 440 aa22.61■■□□□ 1.21
IRF3-231ENST00000602190 AS3MTQ9HBK9 375 aa22.61■■□□□ 1.21
IRF3-231ENST00000602190 MYO5AQ9Y4I1 1855 aaKnown RBP22.61■■□□□ 1.21
IRF3-231ENST00000602190 MCAMP43121 646 aa22.6■■□□□ 1.21
IRF3-231ENST00000602190 TBC1D9Q6ZT07 1266 aa22.6■■□□□ 1.21
IRF3-231ENST00000602190 DHX36Q9H2U1 1008 aaKnown RBP22.6■■□□□ 1.21
IRF3-231ENST00000602190 GINM1Q9NU53 330 aa22.6■■□□□ 1.21
IRF3-231ENST00000602190 MTMR10Q9NXD2 777 aa22.6■■□□□ 1.21
IRF3-231ENST00000602190 PI4KBQ9UBF8 816 aa22.6■■□□□ 1.21
IRF3-231ENST00000602190 UNC80Q8N2C7 3258 aa22.6■■□□□ 1.21
IRF3-231ENST00000602190 ASNSP08243 561 aa22.59■■□□□ 1.21
IRF3-231ENST00000602190 PPP4CP60510 307 aa22.59■■□□□ 1.21
IRF3-231ENST00000602190 LHX8Q68G74 356 aa22.59■■□□□ 1.21
IRF3-231ENST00000602190 TRMT44Q8IYL2 757 aaKnown RBP22.59■■□□□ 1.21
IRF3-231ENST00000602190 DEFB123Q8N688 67 aa22.59■■□□□ 1.21
IRF3-231ENST00000602190 ARHGAP45Q92619 1136 aa22.59■■□□□ 1.21
IRF3-231ENST00000602190 P2RX7Q99572 595 aaKnown RBP22.59■■□□□ 1.21
IRF3-231ENST00000602190 RBPJLQ9UBG7 517 aa22.59■■□□□ 1.21
IRF3-231ENST00000602190 C19orf81C9J6K1 198 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms