RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 INPP5BP32019 993 aa17.29■□□□□ 0.36
USE1-210ENST00000601662 GJA5P36382 358 aa17.29■□□□□ 0.36
USE1-210ENST00000601662 OSBP2Q969R2 916 aa17.29■□□□□ 0.36
USE1-210ENST00000601662 OPTNQ96CV9 577 aa17.29■□□□□ 0.36
USE1-210ENST00000601662 RNF186Q9NXI6 227 aa17.29■□□□□ 0.36
USE1-210ENST00000601662 DOCK2Q92608 1830 aa17.28■□□□□ 0.36
USE1-210ENST00000601662 A0A0D9SFI3 127 aa17.28■□□□□ 0.36
USE1-210ENST00000601662 MAGEB6P1A0A0J9YX57 407 aa17.28■□□□□ 0.36
USE1-210ENST00000601662 EPB41L2O43491 1005 aaKnown RBP17.28■□□□□ 0.36
USE1-210ENST00000601662 CA12O43570 354 aa17.28■□□□□ 0.36
USE1-210ENST00000601662 REM2Q8IYK8 340 aaPredicted RBP17.28■□□□□ 0.36
USE1-210ENST00000601662 OTUD5Q96G74 571 aa17.28■□□□□ 0.36
USE1-210ENST00000601662 OSBPL5Q9H0X9 879 aaPredicted RBP17.28■□□□□ 0.36
USE1-210ENST00000601662 GNAT2P19087 354 aa17.27■□□□□ 0.36
USE1-210ENST00000601662 USP5P45974 858 aa17.27■□□□□ 0.36
USE1-210ENST00000601662 SREBF2Q12772 1141 aa17.27■□□□□ 0.36
USE1-210ENST00000601662 SLC4A8Q2Y0W8 1093 aa17.27■□□□□ 0.36
USE1-210ENST00000601662 SLFNL1Q499Z3 407 aa17.27■□□□□ 0.36
USE1-210ENST00000601662 PUS7LQ9H0K6 701 aaKnown RBP17.27■□□□□ 0.36
USE1-210ENST00000601662 UPF2Q9HAU5 1272 aaKnown RBP17.27■□□□□ 0.36
USE1-210ENST00000601662 SAP30BPQ9UHR5 308 aaKnown RBP17.27■□□□□ 0.36
USE1-210ENST00000601662 SNCAIPQ9Y6H5 919 aa17.27■□□□□ 0.36
USE1-210ENST00000601662 CCDC171Q6TFL3 1326 aa17.26■□□□□ 0.35
USE1-210ENST00000601662 MAST2Q6P0Q8 1798 aa17.26■□□□□ 0.35
USE1-210ENST00000601662 MYH7P12883 1935 aa17.26■□□□□ 0.35
USE1-210ENST00000601662 MANSC4A6NHS7 340 aaPredicted RBP17.26■□□□□ 0.35
USE1-210ENST00000601662 FAM196BA6NMK8 535 aa17.26■□□□□ 0.35
USE1-210ENST00000601662 NPM3O75607 178 aaKnown RBP17.26■□□□□ 0.35
USE1-210ENST00000601662 ZBTB48P10074 688 aaPredicted RBP17.26■□□□□ 0.35
USE1-210ENST00000601662 TM4SF4P48230 202 aa17.26■□□□□ 0.35
USE1-210ENST00000601662 SEC62Q99442 399 aaKnown RBP17.26■□□□□ 0.35
USE1-210ENST00000601662 ZNF112Q9UJU3 913 aa17.26■□□□□ 0.35
USE1-210ENST00000601662 M0R2C6 588 aa17.25■□□□□ 0.35
USE1-210ENST00000601662 GPAA1O43292 621 aa17.25■□□□□ 0.35
USE1-210ENST00000601662 CHGBP05060 677 aa17.25■□□□□ 0.35
USE1-210ENST00000601662 ERO1BQ86YB8 467 aa17.25■□□□□ 0.35
USE1-210ENST00000601662 STRBPQ96SI9 672 aaKnown RBP17.25■□□□□ 0.35
USE1-210ENST00000601662 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.25■□□□□ 0.35
USE1-210ENST00000601662 PRDM10Q9NQV6 1147 aa17.25■□□□□ 0.35
USE1-210ENST00000601662 PALD1Q9ULE6 856 aa17.25■□□□□ 0.35
USE1-210ENST00000601662 FLT1P17948 1338 aa17.24■□□□□ 0.35
USE1-210ENST00000601662 OTOFQ9HC10 1997 aa17.24■□□□□ 0.35
USE1-210ENST00000601662 SPDYE5A6NIY4 337 aa17.24■□□□□ 0.35
USE1-210ENST00000601662 MBD4O95243 580 aa17.24■□□□□ 0.35
USE1-210ENST00000601662 TBC1D8O95759 1140 aa17.24■□□□□ 0.35
USE1-210ENST00000601662 CRNKL1Q9BZJ0 848 aaKnown RBP17.24■□□□□ 0.35
USE1-210ENST00000601662 ANO2Q9NQ90 1003 aa17.24■□□□□ 0.35
USE1-210ENST00000601662 ATRNL1Q5VV63 1379 aa17.24■□□□□ 0.35
USE1-210ENST00000601662 PHF20L1A8MW92 1017 aa17.23■□□□□ 0.35
USE1-210ENST00000601662 PATL2C9JE40 543 aaKnown RBP17.23■□□□□ 0.35
USE1-210ENST00000601662 INHBEP58166 350 aa17.23■□□□□ 0.35
USE1-210ENST00000601662 RIOK1Q9BRS2 568 aaKnown RBP17.23■□□□□ 0.35
USE1-210ENST00000601662 DSCC1Q9BVC3 393 aa17.23■□□□□ 0.35
USE1-210ENST00000601662 NACAP1Q9BZK3 213 aa17.23■□□□□ 0.35
USE1-210ENST00000601662 DHX36Q9H2U1 1008 aaKnown RBP17.23■□□□□ 0.35
USE1-210ENST00000601662 ARMT1Q9H993 441 aa17.23■□□□□ 0.35
USE1-210ENST00000601662 SAGE1Q9NXZ1 904 aa17.23■□□□□ 0.35
USE1-210ENST00000601662 CCL15-CCL14A0A0B4J2E2 113 aa17.22■□□□□ 0.35
USE1-210ENST00000601662 IRF6O14896 467 aa17.22■□□□□ 0.35
USE1-210ENST00000601662 GTF2A2P52657 109 aa17.22■□□□□ 0.35
USE1-210ENST00000601662 CCL15Q16663 113 aa17.22■□□□□ 0.35
USE1-210ENST00000601662 GIMAP6Q6P9H5 292 aa17.22■□□□□ 0.35
USE1-210ENST00000601662 CCDC129Q6ZRS4 1044 aa17.22■□□□□ 0.35
USE1-210ENST00000601662 ZNF589Q86UQ0 364 aaPredicted RBP17.22■□□□□ 0.35
USE1-210ENST00000601662 IFNL1Q8IU54 200 aa17.22■□□□□ 0.35
USE1-210ENST00000601662 LCORLQ8N3X6 602 aa17.22■□□□□ 0.35
USE1-210ENST00000601662 CRACR2BQ8N4Y2 399 aaPredicted RBP17.22■□□□□ 0.35
USE1-210ENST00000601662 DDRGK1Q96HY6 314 aa17.22■□□□□ 0.35
USE1-210ENST00000601662 TRIM34Q9BYJ4 488 aa17.22■□□□□ 0.35
USE1-210ENST00000601662 PICK1Q9NRD5 415 aa17.22■□□□□ 0.35
USE1-210ENST00000601662 PI4KBQ9UBF8 816 aa17.22■□□□□ 0.35
USE1-210ENST00000601662 CTNNA3Q9UI47 895 aa17.22■□□□□ 0.35
USE1-210ENST00000601662 SLC4A4Q9Y6R1 1079 aa17.22■□□□□ 0.35
USE1-210ENST00000601662 CASP8AP2Q9UKL3 1982 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 IGF2BP3O00425 579 aaKnown RBP eCLIP17.21■□□□□ 0.35
USE1-210ENST00000601662 TBC1D12O60347 775 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 SEC24BO95487 1268 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 APPP05067 770 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 HLA-DOAP06340 250 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 HSPD1P10809 573 aaKnown RBP17.21■□□□□ 0.35
USE1-210ENST00000601662 MAP3K10Q02779 954 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 PPATQ06203 517 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 PPIL2Q13356 520 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 SCYL3Q8IZE3 742 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 TNS4Q8IZW8 715 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 BRI3BPQ8WY22 251 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 MAP4K1Q92918 833 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 MS4A4AQ96JQ5 239 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 PTPN18Q99952 460 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 USP26Q9BXU7 913 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 LSG1Q9H089 658 aaKnown RBP17.21■□□□□ 0.35
USE1-210ENST00000601662 IL25Q9H293 177 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 ATP8A2Q9NTI2 1148 aa17.21■□□□□ 0.35
USE1-210ENST00000601662 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
USE1-210ENST00000601662 CTNND1O60716 968 aaKnown RBP17.2■□□□□ 0.34
USE1-210ENST00000601662 MCCP23508 829 aa17.2■□□□□ 0.34
USE1-210ENST00000601662 ALX1Q15699 326 aa17.2■□□□□ 0.34
USE1-210ENST00000601662 NOL9Q5SY16 702 aaKnown RBP17.2■□□□□ 0.34
USE1-210ENST00000601662 OTUD7BQ6GQQ9 843 aa17.2■□□□□ 0.34
USE1-210ENST00000601662 CCDC84Q86UT8 332 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms