RNA–Protein interactions for RNA: ENST00000601549.1

KCNN4-208, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 3

Gene KCNN4, Length 1,093 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-208ENST00000601549 SAMD7Q7Z3H4 446 aa21.45■■□□□ 1.02
KCNN4-208ENST00000601549 ESR2Q92731 530 aa21.45■■□□□ 1.02
KCNN4-208ENST00000601549 HERC5Q9UII4 1024 aaKnown RBP21.45■■□□□ 1.02
KCNN4-208ENST00000601549 SERPINB13Q9UIV8 391 aa21.45■■□□□ 1.02
KCNN4-208ENST00000601549 RBM19Q9Y4C8 960 aaKnown RBP21.45■■□□□ 1.02
KCNN4-208ENST00000601549 PCDHAC2Q9Y5I4 1007 aa21.45■■□□□ 1.02
KCNN4-208ENST00000601549 DDX60LQ5H9U9 1706 aaKnown RBP21.45■■□□□ 1.02
KCNN4-208ENST00000601549 ECM29Q5VYK3 1845 aa21.45■■□□□ 1.02
KCNN4-208ENST00000601549 NAV1Q8NEY1 1877 aa21.44■■□□□ 1.02
KCNN4-208ENST00000601549 CASTP20810 708 aaKnown RBP21.44■■□□□ 1.02
KCNN4-208ENST00000601549 MCM5P33992 734 aa21.44■■□□□ 1.02
KCNN4-208ENST00000601549 EPHX2P34913 555 aa21.44■■□□□ 1.02
KCNN4-208ENST00000601549 HAND2P61296 217 aa21.44■■□□□ 1.02
KCNN4-208ENST00000601549 CCDC178Q5BJE1 867 aa21.44■■□□□ 1.02
KCNN4-208ENST00000601549 C16orf86Q6ZW13 317 aa21.44■■□□□ 1.02
KCNN4-208ENST00000601549 SNX21Q969T3 373 aa21.44■■□□□ 1.02
KCNN4-208ENST00000601549 TAF1DQ9H5J8 278 aaPredicted RBP21.44■■□□□ 1.02
KCNN4-208ENST00000601549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.44■■□□□ 1.02
KCNN4-208ENST00000601549 KIF3CO14782 793 aa21.43■■□□□ 1.02
KCNN4-208ENST00000601549 TBC1D12O60347 775 aa21.43■■□□□ 1.02
KCNN4-208ENST00000601549 RBM26Q5T8P6 1007 aaKnown RBP21.43■■□□□ 1.02
KCNN4-208ENST00000601549 TBC1D10CQ8IV04 446 aa21.43■■□□□ 1.02
KCNN4-208ENST00000601549 NBPF3Q9H094 633 aa21.43■■□□□ 1.02
KCNN4-208ENST00000601549 VEZTQ9HBM0 779 aa21.43■■□□□ 1.02
KCNN4-208ENST00000601549 PGAP2Q9UHJ9 254 aa21.43■■□□□ 1.02
KCNN4-208ENST00000601549 SHTN1A0MZ66 631 aa21.42■■□□□ 1.02
KCNN4-208ENST00000601549 CLRN2A0PK11 232 aa21.42■■□□□ 1.02
KCNN4-208ENST00000601549 POTECB2RU33 542 aa21.42■■□□□ 1.02
KCNN4-208ENST00000601549 RPS6KB1P23443 525 aa21.42■■□□□ 1.02
KCNN4-208ENST00000601549 GABPAQ06546 454 aa21.42■■□□□ 1.02
KCNN4-208ENST00000601549 SART3Q15020 963 aaKnown RBP21.42■■□□□ 1.02
KCNN4-208ENST00000601549 PPP4R3BQ5MIZ7 849 aa21.42■■□□□ 1.02
KCNN4-208ENST00000601549 ZSCAN29Q8IWY8 852 aaPredicted RBP21.42■■□□□ 1.02
KCNN4-208ENST00000601549 ADAMTSL1Q8N6G6 1762 aa21.42■■□□□ 1.02
KCNN4-208ENST00000601549 CCDC17Q96LX7 622 aa21.42■■□□□ 1.02
KCNN4-208ENST00000601549 SAP30BPQ9UHR5 308 aaKnown RBP21.42■■□□□ 1.02
KCNN4-208ENST00000601549 CDK5RAP2Q96SN8 1893 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 LAMB1P07942 1786 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 CNTNAP1P78357 1384 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 TCP10L2B9ZVM9 353 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 TOMM70O94826 608 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 PLCD1P51178 756 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 NEK4P51957 841 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 CTDSPL2Q05D32 466 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 ADCK5Q3MIX3 580 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 STOX1Q6ZVD7 989 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 MB21D2Q8IYB1 491 aaPredicted RBP21.41■■□□□ 1.02
KCNN4-208ENST00000601549 TNS4Q8IZW8 715 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 TRPM4Q8TD43 1214 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 TMEM87BQ96K49 555 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 TRIM34Q9BYJ4 488 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 MKNK2Q9HBH9 465 aa21.41■■□□□ 1.02
KCNN4-208ENST00000601549 EGFRP00533 1210 aa21.4■■□□□ 1.02
KCNN4-208ENST00000601549 CACNB3P54284 484 aa21.4■■□□□ 1.02
KCNN4-208ENST00000601549 EXOSC10Q01780 885 aaKnown RBP21.4■■□□□ 1.02
KCNN4-208ENST00000601549 MAP3K10Q02779 954 aa21.4■■□□□ 1.02
KCNN4-208ENST00000601549 TCP10Q12799 353 aa21.4■■□□□ 1.02
KCNN4-208ENST00000601549 BECN1Q14457 450 aa21.4■■□□□ 1.02
KCNN4-208ENST00000601549 TMTC2Q8N394 836 aa21.4■■□□□ 1.02
KCNN4-208ENST00000601549 DCPSQ96C86 337 aaKnown RBP21.4■■□□□ 1.02
KCNN4-208ENST00000601549 CSRNP1Q96S65 589 aa21.4■■□□□ 1.02
KCNN4-208ENST00000601549 HIRAP54198 1017 aaPredicted RBP21.39■■□□□ 1.01
KCNN4-208ENST00000601549 RASA3Q14644 834 aa21.39■■□□□ 1.01
KCNN4-208ENST00000601549 EAPPQ56P03 285 aaPredicted RBP21.39■■□□□ 1.01
KCNN4-208ENST00000601549 IQCA1Q86XH1 822 aa21.39■■□□□ 1.01
KCNN4-208ENST00000601549 ZNF444Q8N0Y2 327 aaPredicted RBP21.39■■□□□ 1.01
KCNN4-208ENST00000601549 CRACR2BQ8N4Y2 399 aaPredicted RBP21.39■■□□□ 1.01
KCNN4-208ENST00000601549 CHMP4CQ96CF2 233 aa21.39■■□□□ 1.01
KCNN4-208ENST00000601549 DEFB129Q9H1M3 183 aa21.39■■□□□ 1.01
KCNN4-208ENST00000601549 GINM1Q9NU53 330 aa21.39■■□□□ 1.01
KCNN4-208ENST00000601549 PDRG1Q9NUG6 133 aa21.39■■□□□ 1.01
KCNN4-208ENST00000601549 CYP2D7A0A087X1C5 515 aa21.38■■□□□ 1.01
KCNN4-208ENST00000601549 CYP2D6P10635 497 aa21.38■■□□□ 1.01
KCNN4-208ENST00000601549 CDK8P49336 464 aa21.38■■□□□ 1.01
KCNN4-208ENST00000601549 ANGEL2Q5VTE6 544 aaKnown RBP21.38■■□□□ 1.01
KCNN4-208ENST00000601549 LDHDQ86WU2 507 aa21.38■■□□□ 1.01
KCNN4-208ENST00000601549 RBM46Q8TBY0 533 aaKnown RBP21.38■■□□□ 1.01
KCNN4-208ENST00000601549 TTC14Q96N46 770 aa21.38■■□□□ 1.01
KCNN4-208ENST00000601549 AGXT2Q9BYV1 514 aa21.38■■□□□ 1.01
KCNN4-208ENST00000601549 TCP11L1Q9NUJ3 509 aa21.38■■□□□ 1.01
KCNN4-208ENST00000601549 GGA3Q9NZ52 723 aa21.38■■□□□ 1.01
KCNN4-208ENST00000601549 TAF6LQ9Y6J9 622 aa21.38■■□□□ 1.01
KCNN4-208ENST00000601549 MYH1P12882 1939 aa21.37■■□□□ 1.01
KCNN4-208ENST00000601549 NEDD4P46934 1319 aa21.37■■□□□ 1.01
KCNN4-208ENST00000601549 DDTLA6NHG4 134 aaPredicted RBP21.37■■□□□ 1.01
KCNN4-208ENST00000601549 SUPT20HL1Q3ZLR7 823 aa21.37■■□□□ 1.01
KCNN4-208ENST00000601549 DCAF15Q66K64 600 aa21.37■■□□□ 1.01
KCNN4-208ENST00000601549 TATDN1Q6P1N9 297 aa21.37■■□□□ 1.01
KCNN4-208ENST00000601549 SH3BP5LQ7L8J4 393 aa21.37■■□□□ 1.01
KCNN4-208ENST00000601549 SULF1Q8IWU6 871 aa21.37■■□□□ 1.01
KCNN4-208ENST00000601549 UPF3BQ9BZI7 483 aaKnown RBP21.37■■□□□ 1.01
KCNN4-208ENST00000601549 TOMM22Q9NS69 142 aa21.37■■□□□ 1.01
KCNN4-208ENST00000601549 BAZ2AQ9UIF9 1905 aaKnown RBP21.37■■□□□ 1.01
KCNN4-208ENST00000601549 ERICH2A1L162 156 aa21.36■■□□□ 1.01
KCNN4-208ENST00000601549 B4E1Z4 1266 aa21.36■■□□□ 1.01
KCNN4-208ENST00000601549 PRC1O43663 620 aa21.36■■□□□ 1.01
KCNN4-208ENST00000601549 LIFRP42702 1097 aa21.36■■□□□ 1.01
KCNN4-208ENST00000601549 ZFPM1Q8IX07 1006 aa21.36■■□□□ 1.01
KCNN4-208ENST00000601549 SMC1BQ8NDV3 1235 aa21.36■■□□□ 1.01
KCNN4-208ENST00000601549 ZSCAN31Q96LW9 406 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms