RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 NSD3Q9BZ95 1437 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 TSPY2A6NKD2 308 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 ZGPATQ8N5A5 531 aaKnown RBP13.56□□□□□ -0.24
SHANK2-218ENST00000601538 MORC4Q8TE76 937 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 FBXO41Q8TF61 875 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 SSH1Q8WYL5 1049 aa13.56□□□□□ -0.24
SHANK2-218ENST00000601538 SYNMO15061 1565 aa13.55□□□□□ -0.24
SHANK2-218ENST00000601538 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.55□□□□□ -0.24
SHANK2-218ENST00000601538 IGSF22Q8N9C0 903 aa13.55□□□□□ -0.24
SHANK2-218ENST00000601538 PPANQ9NQ55 473 aaKnown RBP13.55□□□□□ -0.24
SHANK2-218ENST00000601538 BAG5Q9UL15 447 aa13.55□□□□□ -0.24
SHANK2-218ENST00000601538 STK38LQ9Y2H1 464 aa13.55□□□□□ -0.24
SHANK2-218ENST00000601538 MCM7P33993 719 aa13.55□□□□□ -0.24
SHANK2-218ENST00000601538 SECISBP2LQ93073 1101 aaKnown RBP13.55□□□□□ -0.24
SHANK2-218ENST00000601538 HAUS7Q99871 368 aa13.55□□□□□ -0.24
SHANK2-218ENST00000601538 STX2P32856 288 aa13.55□□□□□ -0.24
SHANK2-218ENST00000601538 KRT2P35908 639 aa13.55□□□□□ -0.24
SHANK2-218ENST00000601538 CCDC117Q8IWD4 279 aaPredicted RBP13.55□□□□□ -0.24
SHANK2-218ENST00000601538 NAP1L4Q99733 375 aaKnown RBP13.55□□□□□ -0.24
SHANK2-218ENST00000601538 MOV10L1Q9BXT6 1211 aaKnown RBP13.55□□□□□ -0.24
SHANK2-218ENST00000601538 DNMT1P26358 1616 aaKnown RBP13.55□□□□□ -0.24
SHANK2-218ENST00000601538 YEATS2Q9ULM3 1422 aa13.55□□□□□ -0.24
SHANK2-218ENST00000601538 LRRC43Q8N309 656 aa13.55□□□□□ -0.24
SHANK2-218ENST00000601538 FBXO18Q8NFZ0 1043 aa13.55□□□□□ -0.24
SHANK2-218ENST00000601538 TYW1Q9NV66 732 aaKnown RBP13.55□□□□□ -0.24
SHANK2-218ENST00000601538 ARHGAP42A6NI28 874 aa13.55□□□□□ -0.24
SHANK2-218ENST00000601538 DONSONQ9NYP3 566 aa13.55□□□□□ -0.24
SHANK2-218ENST00000601538 GNA11P29992 359 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 PSPC1Q8WXF1 523 aaKnown RBP13.54□□□□□ -0.24
SHANK2-218ENST00000601538 ZKSCAN3Q9BRR0 538 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 APOEP02649 317 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 SLC9C1Q4G0N8 1177 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 MAML3Q96JK9 1138 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 PTPRGP23470 1445 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 KRT71Q3SY84 523 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 CRNKL1Q9BZJ0 848 aaKnown RBP13.54□□□□□ -0.24
SHANK2-218ENST00000601538 KRT15P19012 456 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.54□□□□□ -0.24
SHANK2-218ENST00000601538 DNM1Q05193 864 aaKnown RBP13.54□□□□□ -0.24
SHANK2-218ENST00000601538 FLIIQ13045 1269 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 TMED1Q13445 227 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 PLCB4Q15147 1175 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 PDZD8Q8NEN9 1154 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 SCAF11Q99590 1463 aaKnown RBP13.54□□□□□ -0.24
SHANK2-218ENST00000601538 SUN1O94901 812 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 LMNAP02545 664 aaKnown RBP13.54□□□□□ -0.24
SHANK2-218ENST00000601538 PCYT1AP49585 367 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 PSD3Q9NYI0 1048 aa13.54□□□□□ -0.24
SHANK2-218ENST00000601538 RTEL1-TNFRSF6BF6WH68 1400 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 SKIP12755 728 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 RPS6KA2Q15349 733 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 WDR44Q5JSH3 913 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 TSC22D3Q99576 134 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 TUBB6Q9BUF5 446 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 POLE3Q9NRF9 147 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 FAM135BQ49AJ0 1406 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 PIK3R4Q99570 1358 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 EFHD1Q9BUP0 239 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 IQGAP2Q13576 1575 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 SYNRGQ9UMZ2 1314 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 GNAT2P19087 354 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 TEX11Q8IYF3 940 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 KIF24Q5T7B8 1368 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 DTHD1Q6ZMT9 781 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 RUNDC3BQ96NL0 473 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
SHANK2-218ENST00000601538 RWDD2BP57060 319 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 NBPF20Q3BBV1 942 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 KRT79Q5XKE5 535 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 CLEC17AQ6ZS10 378 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 CCDC84Q86UT8 332 aaPredicted RBP13.53□□□□□ -0.24
SHANK2-218ENST00000601538 ATAD2BQ9ULI0 1458 aa13.53□□□□□ -0.24
SHANK2-218ENST00000601538 CRYMQ14894 314 aa13.52□□□□□ -0.24
SHANK2-218ENST00000601538 LLPHQ9BRT6 129 aaKnown RBP13.52□□□□□ -0.24
SHANK2-218ENST00000601538 PLCD1P51178 756 aa13.52□□□□□ -0.24
SHANK2-218ENST00000601538 TRIM58Q8NG06 486 aa13.52□□□□□ -0.24
SHANK2-218ENST00000601538 ZRANB1Q9UGI0 708 aa13.52□□□□□ -0.24
SHANK2-218ENST00000601538 ASIC3Q9UHC3 531 aa13.52□□□□□ -0.24
SHANK2-218ENST00000601538 MX2P20592 715 aa13.52□□□□□ -0.24
SHANK2-218ENST00000601538 GJC1P36383 396 aa13.52□□□□□ -0.24
SHANK2-218ENST00000601538 GUCY2CP25092 1073 aa13.52□□□□□ -0.25
SHANK2-218ENST00000601538 CCDC125Q86Z20 511 aa13.52□□□□□ -0.25
SHANK2-218ENST00000601538 GRK7Q8WTQ7 553 aa13.52□□□□□ -0.25
SHANK2-218ENST00000601538 DBF4Q9UBU7 674 aaPredicted RBP13.52□□□□□ -0.25
SHANK2-218ENST00000601538 POTEB3A0JP26 581 aa13.52□□□□□ -0.25
SHANK2-218ENST00000601538 IGSF3O75054 1194 aa13.52□□□□□ -0.25
SHANK2-218ENST00000601538 TRIM27P14373 513 aa13.52□□□□□ -0.25
SHANK2-218ENST00000601538 POTEBQ6S5H4 581 aa13.52□□□□□ -0.25
SHANK2-218ENST00000601538 SMARCA5O60264 1052 aaPredicted RBP13.52□□□□□ -0.25
SHANK2-218ENST00000601538 OSBPL9Q96SU4 736 aa13.52□□□□□ -0.25
SHANK2-218ENST00000601538 CHCHD3Q9NX63 227 aaKnown RBP13.52□□□□□ -0.25
SHANK2-218ENST00000601538 CLTAP09496 248 aa13.52□□□□□ -0.25
SHANK2-218ENST00000601538 KCNJ6P48051 423 aa13.52□□□□□ -0.25
SHANK2-218ENST00000601538 RAP1GDS1P52306 607 aa13.52□□□□□ -0.25
SHANK2-218ENST00000601538 TTC19Q6DKK2 380 aaPredicted RBP13.52□□□□□ -0.25
SHANK2-218ENST00000601538 TTC4O95801 387 aa13.51□□□□□ -0.25
SHANK2-218ENST00000601538 ETF1P62495 437 aaKnown RBP13.51□□□□□ -0.25
SHANK2-218ENST00000601538 ALS2CLQ60I27 953 aa13.51□□□□□ -0.25
SHANK2-218ENST00000601538 PAWRQ96IZ0 340 aaKnown RBP13.51□□□□□ -0.25
SHANK2-218ENST00000601538 TXLNGQ9NUQ3 528 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms