RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 PLXNB2O15031 1838 aa20.8■□□□□ 0.92
USE1-208ENST00000600970 NPM3O75607 178 aaKnown RBP20.79■□□□□ 0.92
USE1-208ENST00000600970 MECOMQ03112 1051 aa20.79■□□□□ 0.92
USE1-208ENST00000600970 SPP2Q13103 211 aa20.79■□□□□ 0.92
USE1-208ENST00000600970 ERICH6Q7L0X2 663 aa20.79■□□□□ 0.92
USE1-208ENST00000600970 ANKLE1Q8NAG6 615 aa20.79■□□□□ 0.92
USE1-208ENST00000600970 GDF15Q99988 308 aa20.79■□□□□ 0.92
USE1-208ENST00000600970 DDX60LQ5H9U9 1706 aaKnown RBP20.78■□□□□ 0.92
USE1-208ENST00000600970 HMGCRP04035 888 aa20.78■□□□□ 0.92
USE1-208ENST00000600970 BMP8BP34820 402 aa20.78■□□□□ 0.92
USE1-208ENST00000600970 GCLCP48506 637 aaPredicted RBP20.78■□□□□ 0.92
USE1-208ENST00000600970 C7orf61Q8IZ16 206 aa20.78■□□□□ 0.92
USE1-208ENST00000600970 ZNF280CQ8ND82 737 aa20.78■□□□□ 0.92
USE1-208ENST00000600970 XAGE2Q96GT9 111 aa20.78■□□□□ 0.92
USE1-208ENST00000600970 GJD2Q9UKL4 321 aa20.78■□□□□ 0.92
USE1-208ENST00000600970 A0A1B0GUL7 405 aa20.77■□□□□ 0.92
USE1-208ENST00000600970 HMGCS2P54868 508 aa20.77■□□□□ 0.92
USE1-208ENST00000600970 TRIM32Q13049 653 aa20.77■□□□□ 0.92
USE1-208ENST00000600970 TBC1D2Q9BYX2 928 aa20.77■□□□□ 0.92
USE1-208ENST00000600970 HDAC5Q9UQL6 1122 aa20.77■□□□□ 0.92
USE1-208ENST00000600970 RPTORQ8N122 1335 aa20.77■□□□□ 0.91
USE1-208ENST00000600970 COL2A1P02458 1487 aaPredicted RBP20.76■□□□□ 0.91
USE1-208ENST00000600970 CAP2P40123 477 aa20.76■□□□□ 0.91
USE1-208ENST00000600970 PABPC4Q13310 644 aaKnown RBP eCLIP20.76■□□□□ 0.91
USE1-208ENST00000600970 RRP1BQ14684 758 aaKnown RBP20.76■□□□□ 0.91
USE1-208ENST00000600970 ASCC2Q9H1I8 757 aaPredicted RBP20.76■□□□□ 0.91
USE1-208ENST00000600970 HMX1Q9NP08 348 aaPredicted RBP20.76■□□□□ 0.91
USE1-208ENST00000600970 ZMYND8Q9ULU4 1186 aaPredicted RBP20.76■□□□□ 0.91
USE1-208ENST00000600970 NOB1Q9ULX3 412 aaKnown RBP20.76■□□□□ 0.91
USE1-208ENST00000600970 MNX1P50219 401 aaPredicted RBP20.75■□□□□ 0.91
USE1-208ENST00000600970 TFCP2Q12800 502 aa20.75■□□□□ 0.91
USE1-208ENST00000600970 MVPQ14764 893 aaKnown RBP20.75■□□□□ 0.91
USE1-208ENST00000600970 SH3D19Q5HYK7 790 aa20.75■□□□□ 0.91
USE1-208ENST00000600970 MEIS3Q99687 375 aa20.75■□□□□ 0.91
USE1-208ENST00000600970 AKAP2Q9Y2D5 859 aa20.75■□□□□ 0.91
USE1-208ENST00000600970 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.75■□□□□ 0.91
USE1-208ENST00000600970 USP17L5A8MUK1 530 aa20.74■□□□□ 0.91
USE1-208ENST00000600970 MAP4K4O95819 1239 aaPredicted RBP20.74■□□□□ 0.91
USE1-208ENST00000600970 NSUN4Q96CB9 384 aaKnown RBP20.74■□□□□ 0.91
USE1-208ENST00000600970 CDCA7LQ96GN5 454 aa20.74■□□□□ 0.91
USE1-208ENST00000600970 NBPF3Q9H094 633 aa20.74■□□□□ 0.91
USE1-208ENST00000600970 HMG20BQ9P0W2 317 aa20.74■□□□□ 0.91
USE1-208ENST00000600970 SIPA1L1O43166 1804 aa20.74■□□□□ 0.91
USE1-208ENST00000600970 LDHCP07864 332 aa20.73■□□□□ 0.91
USE1-208ENST00000600970 GSTO1P78417 241 aa20.73■□□□□ 0.91
USE1-208ENST00000600970 PI16Q6UXB8 463 aa20.73■□□□□ 0.91
USE1-208ENST00000600970 TRIB2Q92519 343 aa20.73■□□□□ 0.91
USE1-208ENST00000600970 MORF4L1Q9UBU8 362 aa20.73■□□□□ 0.91
USE1-208ENST00000600970 SYN1P17600 705 aa20.72■□□□□ 0.91
USE1-208ENST00000600970 GPR153Q6NV75 609 aa20.72■□□□□ 0.91
USE1-208ENST00000600970 TBC1D9Q6ZT07 1266 aa20.72■□□□□ 0.91
USE1-208ENST00000600970 NEUROD6Q96NK8 337 aa20.72■□□□□ 0.91
USE1-208ENST00000600970 API5Q9BZZ5 524 aaKnown RBP20.72■□□□□ 0.91
USE1-208ENST00000600970 C11orf49Q9H6J7 331 aa20.72■□□□□ 0.91
USE1-208ENST00000600970 AS3MTQ9HBK9 375 aa20.72■□□□□ 0.91
USE1-208ENST00000600970 OGDHLQ9ULD0 1010 aa20.72■□□□□ 0.91
USE1-208ENST00000600970 CYP2B6P20813 491 aa20.71■□□□□ 0.91
USE1-208ENST00000600970 SPATA5Q8NB90 893 aa20.71■□□□□ 0.91
USE1-208ENST00000600970 HERC5Q9UII4 1024 aaKnown RBP20.71■□□□□ 0.91
USE1-208ENST00000600970 ZNF316A6NFI3 1004 aaPredicted RBP20.7■□□□□ 0.9
USE1-208ENST00000600970 SRGAP3O43295 1099 aa20.7■□□□□ 0.9
USE1-208ENST00000600970 MAGEA10P43363 369 aaPredicted RBP20.7■□□□□ 0.9
USE1-208ENST00000600970 MAP3K21Q5TCX8 1036 aa20.7■□□□□ 0.9
USE1-208ENST00000600970 TEX11Q8IYF3 940 aa20.7■□□□□ 0.9
USE1-208ENST00000600970 TRMT2AQ8IZ69 625 aaKnown RBP20.7■□□□□ 0.9
USE1-208ENST00000600970 DEFB123Q8N688 67 aa20.7■□□□□ 0.9
USE1-208ENST00000600970 WDR18Q9BV38 432 aa20.7■□□□□ 0.9
USE1-208ENST00000600970 RAI14Q9P0K7 980 aa20.7■□□□□ 0.9
USE1-208ENST00000600970 PEX10O60683 326 aa20.69■□□□□ 0.9
USE1-208ENST00000600970 ARID4AP29374 1257 aaPredicted RBP20.69■□□□□ 0.9
USE1-208ENST00000600970 MTMR2Q13614 643 aa20.69■□□□□ 0.9
USE1-208ENST00000600970 LRIT3Q3SXY7 679 aa20.69■□□□□ 0.9
USE1-208ENST00000600970 PFASO15067 1338 aa20.69■□□□□ 0.9
USE1-208ENST00000600970 CDK5RAP2Q96SN8 1893 aa20.69■□□□□ 0.9
USE1-208ENST00000600970 PRKAR2AP13861 404 aaKnown RBP20.68■□□□□ 0.9
USE1-208ENST00000600970 HOXA7P31268 230 aaPredicted RBP20.68■□□□□ 0.9
USE1-208ENST00000600970 BACE1P56817 501 aa20.68■□□□□ 0.9
USE1-208ENST00000600970 IRX3P78415 501 aaPredicted RBP20.68■□□□□ 0.9
USE1-208ENST00000600970 MTX1Q13505 466 aa20.68■□□□□ 0.9
USE1-208ENST00000600970 GORABQ5T7V8 394 aa20.68■□□□□ 0.9
USE1-208ENST00000600970 Q7L0L9 218 aa20.68■□□□□ 0.9
USE1-208ENST00000600970 TDHQ8IZJ6 230 aa20.68■□□□□ 0.9
USE1-208ENST00000600970 SH3RF3Q8TEJ3 882 aaPredicted RBP20.68■□□□□ 0.9
USE1-208ENST00000600970 P2RX7Q99572 595 aaKnown RBP20.68■□□□□ 0.9
USE1-208ENST00000600970 NUDT12Q9BQG2 462 aa20.68■□□□□ 0.9
USE1-208ENST00000600970 TXNRD2Q9NNW7 524 aa20.68■□□□□ 0.9
USE1-208ENST00000600970 PI4KBQ9UBF8 816 aa20.68■□□□□ 0.9
USE1-208ENST00000600970 FOCADQ5VW36 1801 aa20.67■□□□□ 0.9
USE1-208ENST00000600970 CT47B1P0C2W7 299 aaPredicted RBP20.67■□□□□ 0.9
USE1-208ENST00000600970 XRCC5P13010 732 aaKnown RBP20.67■□□□□ 0.9
USE1-208ENST00000600970 MCAMP43121 646 aa20.67■□□□□ 0.9
USE1-208ENST00000600970 JAG1P78504 1218 aa20.67■□□□□ 0.9
USE1-208ENST00000600970 TMOD4Q9NZQ9 345 aa20.67■□□□□ 0.9
USE1-208ENST00000600970 ASNSP08243 561 aa20.66■□□□□ 0.9
USE1-208ENST00000600970 GNAI3P08754 354 aa20.66■□□□□ 0.9
USE1-208ENST00000600970 HERVK_113P62684 666 aa20.66■□□□□ 0.9
USE1-208ENST00000600970 GPRC5AQ8NFJ5 357 aa20.66■□□□□ 0.9
USE1-208ENST00000600970 SOCS4Q8WXH5 440 aa20.66■□□□□ 0.9
USE1-208ENST00000600970 DHX36Q9H2U1 1008 aaKnown RBP20.66■□□□□ 0.9
USE1-208ENST00000600970 LRP2BPQ9P2M1 347 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms