RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 ERO1AQ96HE7 468 aa20.42■□□□□ 0.86
NOTCH3-205ENST00000600841 BOLA2Q9H3K6 86 aa20.42■□□□□ 0.86
NOTCH3-205ENST00000600841 PAG1Q9NWQ8 432 aa20.42■□□□□ 0.86
NOTCH3-205ENST00000600841 USP5P45974 858 aa20.41■□□□□ 0.86
NOTCH3-205ENST00000600841 SP3Q02447 781 aa20.41■□□□□ 0.86
NOTCH3-205ENST00000600841 ANKRD23Q86SG2 305 aa20.41■□□□□ 0.86
NOTCH3-205ENST00000600841 SAP30BPQ9UHR5 308 aaKnown RBP20.41■□□□□ 0.86
NOTCH3-205ENST00000600841 PALD1Q9ULE6 856 aa20.41■□□□□ 0.86
NOTCH3-205ENST00000600841 PCDHB15Q9Y5E8 787 aa20.41■□□□□ 0.86
NOTCH3-205ENST00000600841 SIPA1L1O43166 1804 aa20.41■□□□□ 0.86
NOTCH3-205ENST00000600841 MYH1P12882 1939 aa20.41■□□□□ 0.86
NOTCH3-205ENST00000600841 HLA-DOAP06340 250 aa20.4■□□□□ 0.86
NOTCH3-205ENST00000600841 PHIPQ8WWQ0 1821 aa20.4■□□□□ 0.86
NOTCH3-205ENST00000600841 EDC3Q96F86 508 aaKnown RBP20.4■□□□□ 0.86
NOTCH3-205ENST00000600841 ATAD5Q96QE3 1844 aa20.4■□□□□ 0.86
NOTCH3-205ENST00000600841 HAUS7Q99871 368 aa20.4■□□□□ 0.86
NOTCH3-205ENST00000600841 TRIM34Q9BYJ4 488 aa20.4■□□□□ 0.86
NOTCH3-205ENST00000600841 AFG3L2Q9Y4W6 797 aa20.4■□□□□ 0.86
NOTCH3-205ENST00000600841 A0A0G2JLL6 359 aaPredicted RBP20.39■□□□□ 0.85
NOTCH3-205ENST00000600841 MAGEB6P1A0A0J9YX57 407 aa20.39■□□□□ 0.85
NOTCH3-205ENST00000600841 PDHXO00330 501 aa20.39■□□□□ 0.85
NOTCH3-205ENST00000600841 CAP2P40123 477 aa20.39■□□□□ 0.85
NOTCH3-205ENST00000600841 MOGSQ13724 837 aa20.39■□□□□ 0.85
NOTCH3-205ENST00000600841 FBXO46Q6PJ61 603 aaPredicted RBP20.39■□□□□ 0.85
NOTCH3-205ENST00000600841 FASTKD5Q7L8L6 764 aaKnown RBP20.39■□□□□ 0.85
NOTCH3-205ENST00000600841 PRRT2Q7Z6L0 340 aaPredicted RBP20.39■□□□□ 0.85
NOTCH3-205ENST00000600841 FOXP4Q8IVH2 680 aaPredicted RBP20.39■□□□□ 0.85
NOTCH3-205ENST00000600841 CRACR2BQ8N4Y2 399 aaPredicted RBP20.39■□□□□ 0.85
NOTCH3-205ENST00000600841 CD99L2Q8TCZ2 262 aa20.39■□□□□ 0.85
NOTCH3-205ENST00000600841 CRBNQ96SW2 442 aa20.39■□□□□ 0.85
NOTCH3-205ENST00000600841 TRIM17Q9Y577 477 aa20.39■□□□□ 0.85
NOTCH3-205ENST00000600841 PTPRFP10586 1907 aa20.39■□□□□ 0.85
NOTCH3-205ENST00000600841 ZNF532Q9HCE3 1301 aa20.38■□□□□ 0.85
NOTCH3-205ENST00000600841 TLR2O60603 784 aa20.38■□□□□ 0.85
NOTCH3-205ENST00000600841 GPATCH3Q96I76 525 aa20.38■□□□□ 0.85
NOTCH3-205ENST00000600841 RIOK1Q9BRS2 568 aaKnown RBP20.38■□□□□ 0.85
NOTCH3-205ENST00000600841 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.38■□□□□ 0.85
NOTCH3-205ENST00000600841 ECHDC1Q9NTX5 307 aa20.38■□□□□ 0.85
NOTCH3-205ENST00000600841 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.38■□□□□ 0.85
NOTCH3-205ENST00000600841 HPS5Q9UPZ3 1129 aa20.38■□□□□ 0.85
NOTCH3-205ENST00000600841 TCRBV5S4A2TA0A5A2 114 aa20.37■□□□□ 0.85
NOTCH3-205ENST00000600841 TRIM75PA6NK02 468 aa20.37■□□□□ 0.85
NOTCH3-205ENST00000600841 RRP1BQ14684 758 aaKnown RBP20.37■□□□□ 0.85
NOTCH3-205ENST00000600841 OTOP1Q7RTM1 612 aa20.37■□□□□ 0.85
NOTCH3-205ENST00000600841 METTL16Q86W50 562 aaKnown RBP20.37■□□□□ 0.85
NOTCH3-205ENST00000600841 TBC1D2Q9BYX2 928 aa20.37■□□□□ 0.85
NOTCH3-205ENST00000600841 MYH7P12883 1935 aa20.37■□□□□ 0.85
NOTCH3-205ENST00000600841 ARHGEF6Q15052 776 aa20.36■□□□□ 0.85
NOTCH3-205ENST00000600841 SLC4A8Q2Y0W8 1093 aa20.36■□□□□ 0.85
NOTCH3-205ENST00000600841 GPAT2Q6NUI2 795 aa20.36■□□□□ 0.85
NOTCH3-205ENST00000600841 GADL1Q6ZQY3 521 aa20.36■□□□□ 0.85
NOTCH3-205ENST00000600841 CCDC84Q86UT8 332 aaPredicted RBP20.36■□□□□ 0.85
NOTCH3-205ENST00000600841 CRNKL1Q9BZJ0 848 aaKnown RBP20.36■□□□□ 0.85
NOTCH3-205ENST00000600841 DNAJC18Q9H819 358 aa20.36■□□□□ 0.85
NOTCH3-205ENST00000600841 EFCC1Q9HA90 598 aa20.36■□□□□ 0.85
NOTCH3-205ENST00000600841 HTTP42858 3142 aa20.36■□□□□ 0.85
NOTCH3-205ENST00000600841 ADD2P35612 726 aa20.35■□□□□ 0.85
NOTCH3-205ENST00000600841 PARK7Q99497 189 aaKnown RBP20.35■□□□□ 0.85
NOTCH3-205ENST00000600841 NAV1Q8NEY1 1877 aa20.35■□□□□ 0.85
NOTCH3-205ENST00000600841 USP17L5A8MUK1 530 aa20.34■□□□□ 0.85
NOTCH3-205ENST00000600841 ASNSP08243 561 aa20.34■□□□□ 0.85
NOTCH3-205ENST00000600841 SPP2Q13103 211 aa20.34■□□□□ 0.85
NOTCH3-205ENST00000600841 TTC6Q86TZ1 520 aa20.34■□□□□ 0.85
NOTCH3-205ENST00000600841 ZNF280CQ8ND82 737 aa20.34■□□□□ 0.85
NOTCH3-205ENST00000600841 KIF22Q14807 665 aa20.33■□□□□ 0.85
NOTCH3-205ENST00000600841 ZSCAN25Q6NSZ9 544 aa20.33■□□□□ 0.85
NOTCH3-205ENST00000600841 C17orf99Q6UX52 265 aa20.33■□□□□ 0.85
NOTCH3-205ENST00000600841 LCORLQ8N3X6 602 aa20.33■□□□□ 0.85
NOTCH3-205ENST00000600841 EHD4Q9H223 541 aa20.33■□□□□ 0.85
NOTCH3-205ENST00000600841 AS3MTQ9HBK9 375 aa20.33■□□□□ 0.85
NOTCH3-205ENST00000600841 GINM1Q9NU53 330 aa20.33■□□□□ 0.85
NOTCH3-205ENST00000600841 CPA4Q9UI42 421 aa20.33■□□□□ 0.85
NOTCH3-205ENST00000600841 SERPINB13Q9UIV8 391 aa20.33■□□□□ 0.85
NOTCH3-205ENST00000600841 SLC45A1Q9Y2W3 748 aa20.33■□□□□ 0.85
NOTCH3-205ENST00000600841 LACTBP83111 547 aaPredicted RBP20.32■□□□□ 0.84
NOTCH3-205ENST00000600841 CAP1Q01518 475 aa20.32■□□□□ 0.84
NOTCH3-205ENST00000600841 DDX60LQ5H9U9 1706 aaKnown RBP20.32■□□□□ 0.84
NOTCH3-205ENST00000600841 CENPFP49454 3210 aa20.32■□□□□ 0.84
NOTCH3-205ENST00000600841 ADGRA2Q96PE1 1338 aa20.31■□□□□ 0.84
NOTCH3-205ENST00000600841 GDF11O95390 407 aa20.31■□□□□ 0.84
NOTCH3-205ENST00000600841 POLR3DP05423 398 aaPredicted RBP20.31■□□□□ 0.84
NOTCH3-205ENST00000600841 CYP2C8P10632 490 aa20.31■□□□□ 0.84
NOTCH3-205ENST00000600841 AAMPQ13685 434 aa20.31■□□□□ 0.84
NOTCH3-205ENST00000600841 UBE3CQ15386 1083 aa20.31■□□□□ 0.84
NOTCH3-205ENST00000600841 SLFNL1Q499Z3 407 aa20.31■□□□□ 0.84
NOTCH3-205ENST00000600841 TSHZ3Q63HK5 1081 aa20.31■□□□□ 0.84
NOTCH3-205ENST00000600841 PROCA1Q8NCQ7 364 aaPredicted RBP20.31■□□□□ 0.84
NOTCH3-205ENST00000600841 WDR18Q9BV38 432 aa20.31■□□□□ 0.84
NOTCH3-205ENST00000600841 ARMT1Q9H993 441 aa20.31■□□□□ 0.84
NOTCH3-205ENST00000600841 ZBTB21Q9ULJ3 1066 aa20.31■□□□□ 0.84
NOTCH3-205ENST00000600841 AGTPBP1Q9UPW5 1226 aa20.31■□□□□ 0.84
NOTCH3-205ENST00000600841 PTPN22Q9Y2R2 807 aa20.31■□□□□ 0.84
NOTCH3-205ENST00000600841 MBD4O95243 580 aa20.3■□□□□ 0.84
NOTCH3-205ENST00000600841 PLCD1P51178 756 aa20.3■□□□□ 0.84
NOTCH3-205ENST00000600841 SDR42E1Q8WUS8 393 aa20.3■□□□□ 0.84
NOTCH3-205ENST00000600841 MCM9Q9NXL9 1143 aa20.3■□□□□ 0.84
NOTCH3-205ENST00000600841 ZBTB47Q9UFB7 747 aaPredicted RBP20.3■□□□□ 0.84
NOTCH3-205ENST00000600841 LOC285556D6RIA3 1793 aa20.3■□□□□ 0.84
NOTCH3-205ENST00000600841 TTC41PQ6P2S7 1318 aa20.29■□□□□ 0.84
NOTCH3-205ENST00000600841 HMGCS2P54868 508 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms