RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 ECM2O94769 699 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-226ENST00000600791 GNRH1P01148 92 aa18.39■□□□□ 0.53
SHKBP1-226ENST00000600791 MS4A1P11836 297 aa18.39■□□□□ 0.53
SHKBP1-226ENST00000600791 PLCG2P16885 1265 aa18.39■□□□□ 0.53
SHKBP1-226ENST00000600791 PPP4CP60510 307 aa18.39■□□□□ 0.53
SHKBP1-226ENST00000600791 GADL1Q6ZQY3 521 aa18.39■□□□□ 0.53
SHKBP1-226ENST00000600791 ERC1Q8IUD2 1116 aa18.39■□□□□ 0.53
SHKBP1-226ENST00000600791 IGSF3O75054 1194 aa18.38■□□□□ 0.53
SHKBP1-226ENST00000600791 TRIM47Q96LD4 638 aa18.38■□□□□ 0.53
SHKBP1-226ENST00000600791 FLT1P17948 1338 aa18.38■□□□□ 0.53
SHKBP1-226ENST00000600791 LOC285556D6RIA3 1793 aa18.37■□□□□ 0.53
SHKBP1-226ENST00000600791 BCRP11274 1271 aa18.37■□□□□ 0.53
SHKBP1-226ENST00000600791 PSMC4P43686 418 aa18.37■□□□□ 0.53
SHKBP1-226ENST00000600791 RRP1BQ14684 758 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-226ENST00000600791 NBPF11Q86T75 865 aa18.37■□□□□ 0.53
SHKBP1-226ENST00000600791 AACSQ86V21 672 aa18.37■□□□□ 0.53
SHKBP1-226ENST00000600791 MAPKAPK5Q8IW41 473 aa18.37■□□□□ 0.53
SHKBP1-226ENST00000600791 TGFBRAP1Q8WUH2 860 aa18.37■□□□□ 0.53
SHKBP1-226ENST00000600791 DHX36Q9H2U1 1008 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-226ENST00000600791 HERC5Q9UII4 1024 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-226ENST00000600791 SLC45A1Q9Y2W3 748 aa18.37■□□□□ 0.53
SHKBP1-226ENST00000600791 NDUFB9Q9Y6M9 179 aa18.37■□□□□ 0.53
SHKBP1-226ENST00000600791 IDH1O75874 414 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-226ENST00000600791 CAP2P40123 477 aa18.36■□□□□ 0.53
SHKBP1-226ENST00000600791 PRMT2P55345 433 aa18.36■□□□□ 0.53
SHKBP1-226ENST00000600791 SH3TC2Q8TF17 1288 aa18.36■□□□□ 0.53
SHKBP1-226ENST00000600791 IL1RAPL2Q9NP60 686 aa18.36■□□□□ 0.53
SHKBP1-226ENST00000600791 PI4KBQ9UBF8 816 aa18.36■□□□□ 0.53
SHKBP1-226ENST00000600791 DDX19BQ9UMR2 479 aa18.36■□□□□ 0.53
SHKBP1-226ENST00000600791 COG6Q9Y2V7 657 aa18.36■□□□□ 0.53
SHKBP1-226ENST00000600791 MGAMO43451 1857 aa18.35■□□□□ 0.53
SHKBP1-226ENST00000600791 OSBPP22059 807 aa18.35■□□□□ 0.53
SHKBP1-226ENST00000600791 CYP7A1P22680 504 aa18.35■□□□□ 0.53
SHKBP1-226ENST00000600791 DYNLL1P63167 89 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-226ENST00000600791 HSP90AB4PQ58FF6 505 aa18.35■□□□□ 0.53
SHKBP1-226ENST00000600791 PRPF38BQ5VTL8 546 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-226ENST00000600791 RHPN1Q8TCX5 695 aa18.35■□□□□ 0.53
SHKBP1-226ENST00000600791 TMEM106CQ9BVX2 250 aa18.35■□□□□ 0.53
SHKBP1-226ENST00000600791 ANTXR1Q9H6X2 564 aa18.35■□□□□ 0.53
SHKBP1-226ENST00000600791 DNAJC18Q9H819 358 aa18.35■□□□□ 0.53
SHKBP1-226ENST00000600791 ZBTB40Q9NUA8 1239 aa18.35■□□□□ 0.53
SHKBP1-226ENST00000600791 SRRDQ9UH36 339 aa18.35■□□□□ 0.53
SHKBP1-226ENST00000600791 AGTPBP1Q9UPW5 1226 aa18.35■□□□□ 0.53
SHKBP1-226ENST00000600791 FMNL1O95466 1100 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-226ENST00000600791 EN2P19622 333 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-226ENST00000600791 SPP2Q13103 211 aa18.34■□□□□ 0.53
SHKBP1-226ENST00000600791 TREML2Q5T2D2 321 aa18.34■□□□□ 0.53
SHKBP1-226ENST00000600791 SIRT2Q8IXJ6 389 aa18.34■□□□□ 0.53
SHKBP1-226ENST00000600791 RPAP2Q8IXW5 612 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-226ENST00000600791 ZNF280CQ8ND82 737 aa18.34■□□□□ 0.53
SHKBP1-226ENST00000600791 RCAN3Q9UKA8 241 aa18.34■□□□□ 0.53
SHKBP1-226ENST00000600791 PALD1Q9ULE6 856 aa18.34■□□□□ 0.53
SHKBP1-226ENST00000600791 MYPNQ86TC9 1320 aa18.33■□□□□ 0.53
SHKBP1-226ENST00000600791 MYCP01106 439 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-226ENST00000600791 HOXD10P28358 340 aa18.33■□□□□ 0.52
SHKBP1-226ENST00000600791 FCGRTP55899 365 aa18.33■□□□□ 0.52
SHKBP1-226ENST00000600791 METTL16Q86W50 562 aaKnown RBP18.33■□□□□ 0.52
SHKBP1-226ENST00000600791 MAGEB6Q8N7X4 407 aa18.33■□□□□ 0.52
SHKBP1-226ENST00000600791 MIGA1Q8NAN2 632 aa18.33■□□□□ 0.52
SHKBP1-226ENST00000600791 PROCA1Q8NCQ7 364 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-226ENST00000600791 SMCR8Q8TEV9 937 aaPredicted RBP18.33■□□□□ 0.52
SHKBP1-226ENST00000600791 TBC1D2Q9BYX2 928 aa18.33■□□□□ 0.52
SHKBP1-226ENST00000600791 USP17L5A8MUK1 530 aa18.32■□□□□ 0.52
SHKBP1-226ENST00000600791 APBB1O00213 710 aa18.32■□□□□ 0.52
SHKBP1-226ENST00000600791 HMMRO75330 724 aa18.32■□□□□ 0.52
SHKBP1-226ENST00000600791 HMGCS2P54868 508 aa18.32■□□□□ 0.52
SHKBP1-226ENST00000600791 SLC4A8Q2Y0W8 1093 aa18.32■□□□□ 0.52
SHKBP1-226ENST00000600791 KIF1BPQ96EK5 621 aa18.32■□□□□ 0.52
SHKBP1-226ENST00000600791 SAP30BPQ9UHR5 308 aaKnown RBP18.32■□□□□ 0.52
SHKBP1-226ENST00000600791 MYH1P12882 1939 aa18.31■□□□□ 0.52
SHKBP1-226ENST00000600791 JAG1P78504 1218 aa18.31■□□□□ 0.52
SHKBP1-226ENST00000600791 PRKCZQ05513 592 aa18.31■□□□□ 0.52
SHKBP1-226ENST00000600791 MAP3K12Q12852 859 aa18.31■□□□□ 0.52
SHKBP1-226ENST00000600791 FOXP4Q8IVH2 680 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-226ENST00000600791 CLASRPQ8N2M8 674 aaKnown RBP18.31■□□□□ 0.52
SHKBP1-226ENST00000600791 CRACR2BQ8N4Y2 399 aaPredicted RBP18.31■□□□□ 0.52
SHKBP1-226ENST00000600791 RAET1EQ8TD07 263 aa18.31■□□□□ 0.52
SHKBP1-226ENST00000600791 PNMA3Q9UL41 463 aa18.31■□□□□ 0.52
SHKBP1-226ENST00000600791 DDX60LQ5H9U9 1706 aaKnown RBP18.3■□□□□ 0.52
SHKBP1-226ENST00000600791 HLA-DOAP06340 250 aa18.3■□□□□ 0.52
SHKBP1-226ENST00000600791 ASNSP08243 561 aa18.3■□□□□ 0.52
SHKBP1-226ENST00000600791 SHROOM1Q2M3G4 852 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-226ENST00000600791 TMED8Q6PL24 325 aaPredicted RBP18.3■□□□□ 0.52
SHKBP1-226ENST00000600791 CERS3Q8IU89 383 aa18.3■□□□□ 0.52
SHKBP1-226ENST00000600791 TRIM34Q9BYJ4 488 aa18.3■□□□□ 0.52
SHKBP1-226ENST00000600791 AS3MTQ9HBK9 375 aa18.3■□□□□ 0.52
SHKBP1-226ENST00000600791 GDF11O95390 407 aa18.29■□□□□ 0.52
SHKBP1-226ENST00000600791 GRK4P32298 578 aa18.29■□□□□ 0.52
SHKBP1-226ENST00000600791 USP5P45974 858 aa18.29■□□□□ 0.52
SHKBP1-226ENST00000600791 SH3D19Q5HYK7 790 aa18.29■□□□□ 0.52
SHKBP1-226ENST00000600791 ANKRD13CQ8N6S4 541 aa18.29■□□□□ 0.52
SHKBP1-226ENST00000600791 WDR18Q9BV38 432 aa18.29■□□□□ 0.52
SHKBP1-226ENST00000600791 GABRQQ9UN88 632 aa18.29■□□□□ 0.52
SHKBP1-226ENST00000600791 MTMR2Q13614 643 aa18.28■□□□□ 0.52
SHKBP1-226ENST00000600791 TTF1Q15361 905 aaPredicted RBP18.28■□□□□ 0.52
SHKBP1-226ENST00000600791 MTFR1Q15390 333 aa18.28■□□□□ 0.52
SHKBP1-226ENST00000600791 C20orf194Q5TEA3 1177 aa18.28■□□□□ 0.52
SHKBP1-226ENST00000600791 CHMP4BQ9H444 224 aaKnown RBP18.28■□□□□ 0.52
SHKBP1-226ENST00000600791 ZBTB21Q9ULJ3 1066 aa18.28■□□□□ 0.52
SHKBP1-226ENST00000600791 NAV1Q8NEY1 1877 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms