RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 DDTLA6NHG4 134 aaPredicted RBP22.17■■□□□ 1.14
SSBP4-207ENST00000600244 PRDX5P30044 214 aa22.17■■□□□ 1.14
SSBP4-207ENST00000600244 PABPC4Q13310 644 aaKnown RBP eCLIP22.17■■□□□ 1.143e-7■■□□□ 12.7
SSBP4-207ENST00000600244 SUCLG2Q96I99 432 aa22.17■■□□□ 1.14
SSBP4-207ENST00000600244 CACNA1FO60840 1977 aa22.17■■□□□ 1.14
SSBP4-207ENST00000600244 RFX7Q2KHR2 1363 aa22.16■■□□□ 1.14
SSBP4-207ENST00000600244 TMEM265A0A087WTH1 108 aa22.16■■□□□ 1.14
SSBP4-207ENST00000600244 ZKSCAN1P17029 563 aaPredicted RBP22.16■■□□□ 1.14
SSBP4-207ENST00000600244 SPP2Q13103 211 aa22.16■■□□□ 1.14
SSBP4-207ENST00000600244 C9orf78Q9NZ63 289 aaPredicted RBP22.16■■□□□ 1.14
SSBP4-207ENST00000600244 PRKAG2Q9UGJ0 569 aa22.16■■□□□ 1.14
SSBP4-207ENST00000600244 LOC285556D6RIA3 1793 aa22.15■■□□□ 1.14
SSBP4-207ENST00000600244 MAP3K12Q12852 859 aa22.15■■□□□ 1.14
SSBP4-207ENST00000600244 CCL14Q16627 93 aa22.15■■□□□ 1.14
SSBP4-207ENST00000600244 NCOR1O75376 2440 aa22.15■■□□□ 1.14
SSBP4-207ENST00000600244 IFIT1P09914 478 aaKnown RBP22.14■■□□□ 1.13
SSBP4-207ENST00000600244 ATN1P54259 1190 aaPredicted RBP22.14■■□□□ 1.13
SSBP4-207ENST00000600244 HMGCS2P54868 508 aa22.14■■□□□ 1.13
SSBP4-207ENST00000600244 SH3D19Q5HYK7 790 aa22.14■■□□□ 1.13
SSBP4-207ENST00000600244 ZSCAN29Q8IWY8 852 aaPredicted RBP22.14■■□□□ 1.13
SSBP4-207ENST00000600244 ZNF280CQ8ND82 737 aa22.14■■□□□ 1.13
SSBP4-207ENST00000600244 TBC1D12O60347 775 aa22.13■■□□□ 1.13
SSBP4-207ENST00000600244 ALDH1L1O75891 902 aa22.13■■□□□ 1.13
SSBP4-207ENST00000600244 RTP1P59025 263 aa22.13■■□□□ 1.13
SSBP4-207ENST00000600244 PEX10O60683 326 aa22.12■■□□□ 1.13
SSBP4-207ENST00000600244 LDHBP07195 334 aaKnown RBP22.12■■□□□ 1.13
SSBP4-207ENST00000600244 PUM3Q15397 648 aaKnown RBP22.12■■□□□ 1.13
SSBP4-207ENST00000600244 RABL6Q3YEC7 729 aaPredicted RBP22.12■■□□□ 1.13
SSBP4-207ENST00000600244 MORN1Q5T089 497 aa22.12■■□□□ 1.13
SSBP4-207ENST00000600244 TXNRD2Q9NNW7 524 aa22.12■■□□□ 1.13
SSBP4-207ENST00000600244 DDX4Q9NQI0 724 aaKnown RBP22.12■■□□□ 1.13
SSBP4-207ENST00000600244 VAMP4O75379 141 aa22.11■■□□□ 1.13
SSBP4-207ENST00000600244 GRIN2CQ14957 1233 aa22.11■■□□□ 1.13
SSBP4-207ENST00000600244 GPRC5AQ8NFJ5 357 aa22.11■■□□□ 1.13
SSBP4-207ENST00000600244 BADQ92934 168 aa22.11■■□□□ 1.13
SSBP4-207ENST00000600244 P2RX7Q99572 595 aaKnown RBP22.11■■□□□ 1.13
SSBP4-207ENST00000600244 TBC1D2Q9BYX2 928 aa22.11■■□□□ 1.13
SSBP4-207ENST00000600244 GAKO14976 1311 aa22.1■■□□□ 1.13
SSBP4-207ENST00000600244 MAPK4P31152 587 aa22.1■■□□□ 1.13
SSBP4-207ENST00000600244 RGS2P41220 211 aa22.1■■□□□ 1.13
SSBP4-207ENST00000600244 ATXN2LQ8WWM7 1075 aaKnown RBP22.1■■□□□ 1.13
SSBP4-207ENST00000600244 OSBPL5Q9H0X9 879 aaPredicted RBP22.1■■□□□ 1.13
SSBP4-207ENST00000600244 PRKRIP1Q9H875 184 aaPredicted RBP22.1■■□□□ 1.13
SSBP4-207ENST00000600244 FRMPD3Q5JV73 1810 aa22.1■■□□□ 1.13
SSBP4-207ENST00000600244 SALL1Q9NSC2 1324 aa22.09■■□□□ 1.13
SSBP4-207ENST00000600244 DNM1LO00429 736 aa22.09■■□□□ 1.13
SSBP4-207ENST00000600244 NBPF7P0C2Y1 421 aaPredicted RBP22.09■■□□□ 1.13
SSBP4-207ENST00000600244 HOXA7P31268 230 aaPredicted RBP22.09■■□□□ 1.13
SSBP4-207ENST00000600244 PDE3AQ14432 1141 aa22.09■■□□□ 1.13
SSBP4-207ENST00000600244 LPAR1Q92633 364 aa22.09■■□□□ 1.13
SSBP4-207ENST00000600244 BICC1Q9H694 974 aaKnown RBP22.09■■□□□ 1.13
SSBP4-207ENST00000600244 RBPJLQ9UBG7 517 aa22.09■■□□□ 1.13
SSBP4-207ENST00000600244 BDP1A6H8Y1 2624 aa22.09■■□□□ 1.13
SSBP4-207ENST00000600244 UTYO14607 1347 aa22.08■■□□□ 1.13
SSBP4-207ENST00000600244 Q3C1V9 767 aa22.08■■□□□ 1.13
SSBP4-207ENST00000600244 ANKRD44Q8N8A2 993 aa22.08■■□□□ 1.13
SSBP4-207ENST00000600244 APBA2Q99767 749 aa22.08■■□□□ 1.13
SSBP4-207ENST00000600244 DDX20Q9UHI6 824 aaKnown RBP22.08■■□□□ 1.13
SSBP4-207ENST00000600244 MYH13Q9UKX3 1938 aa22.08■■□□□ 1.12
SSBP4-207ENST00000600244 SYNGAP1Q96PV0 1343 aa22.07■■□□□ 1.12
SSBP4-207ENST00000600244 IRX3P78415 501 aaPredicted RBP22.07■■□□□ 1.12
SSBP4-207ENST00000600244 RRP1BQ14684 758 aaKnown RBP22.07■■□□□ 1.12
SSBP4-207ENST00000600244 CCDC27Q2M243 656 aa22.07■■□□□ 1.12
SSBP4-207ENST00000600244 GPR142Q7Z601 462 aa22.07■■□□□ 1.12
SSBP4-207ENST00000600244 KLHDC4Q8TBB5 520 aa22.07■■□□□ 1.12
SSBP4-207ENST00000600244 LPIN2Q92539 896 aa22.07■■□□□ 1.12
SSBP4-207ENST00000600244 ASB2Q96Q27 587 aa22.07■■□□□ 1.12
SSBP4-207ENST00000600244 PORCNQ9H237 461 aa22.07■■□□□ 1.12
SSBP4-207ENST00000600244 ATP11BQ9Y2G3 1177 aa22.07■■□□□ 1.12
SSBP4-207ENST00000600244 FAM196BA6NMK8 535 aa22.06■■□□□ 1.12
SSBP4-207ENST00000600244 USP17L5A8MUK1 530 aa22.06■■□□□ 1.12
SSBP4-207ENST00000600244 HERVK_113P62684 666 aa22.06■■□□□ 1.12
SSBP4-207ENST00000600244 SLC39A5Q6ZMH5 540 aa22.06■■□□□ 1.12
SSBP4-207ENST00000600244 WWC1Q8IX03 1113 aa22.06■■□□□ 1.12
SSBP4-207ENST00000600244 ADAMTS19Q8TE59 1207 aa22.06■■□□□ 1.12
SSBP4-207ENST00000600244 FAM163AQ96GL9 167 aaPredicted RBP22.06■■□□□ 1.12
SSBP4-207ENST00000600244 SRCIN1Q9C0H9 1055 aa22.06■■□□□ 1.12
SSBP4-207ENST00000600244 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.06■■□□□ 1.12
SSBP4-207ENST00000600244 MSCO60682 206 aa22.05■■□□□ 1.12
SSBP4-207ENST00000600244 SLC5A1P13866 664 aa22.05■■□□□ 1.12
SSBP4-207ENST00000600244 CAP2P40123 477 aa22.05■■□□□ 1.12
SSBP4-207ENST00000600244 SNX17Q15036 470 aa22.05■■□□□ 1.12
SSBP4-207ENST00000600244 POTEEQ6S8J3 1075 aa22.05■■□□□ 1.12
SSBP4-207ENST00000600244 PLEKHH3Q7Z736 793 aa22.05■■□□□ 1.12
SSBP4-207ENST00000600244 FLRT1Q9NZU1 646 aa22.05■■□□□ 1.12
SSBP4-207ENST00000600244 ARIH1Q9Y4X5 557 aaPredicted RBP22.05■■□□□ 1.12
SSBP4-207ENST00000600244 RLFQ13129 1914 aa22.05■■□□□ 1.12
SSBP4-207ENST00000600244 IL16Q14005 1332 aa22.05■■□□□ 1.12
SSBP4-207ENST00000600244 MYH2Q9UKX2 1941 aa22.04■■□□□ 1.12
SSBP4-207ENST00000600244 ERVK-9P63128 1117 aa22.04■■□□□ 1.12
SSBP4-207ENST00000600244 ERVK-24P63145 666 aa22.04■■□□□ 1.12
SSBP4-207ENST00000600244 MAP2K5Q13163 448 aa22.04■■□□□ 1.12
SSBP4-207ENST00000600244 PICALMQ13492 652 aa22.04■■□□□ 1.12
SSBP4-207ENST00000600244 SH3RF1Q7Z6J0 888 aa22.04■■□□□ 1.12
SSBP4-207ENST00000600244 WDR18Q9BV38 432 aa22.04■■□□□ 1.12
SSBP4-207ENST00000600244 PRDM5Q9NQX1 630 aaPredicted RBP22.04■■□□□ 1.12
SSBP4-207ENST00000600244 PDLIM7Q9NR12 457 aa22.04■■□□□ 1.12
SSBP4-207ENST00000600244 TRIM43BA6NCK2 446 aa22.03■■□□□ 1.12
SSBP4-207ENST00000600244 NPM3O75607 178 aaKnown RBP22.03■■□□□ 1.12
SSBP4-207ENST00000600244 MFSD14CQ5VZR4 134 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms