RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 CERS3Q8IU89 383 aa13.98□□□□□ -0.17
HIF3A-217ENST00000600236 SH3RF3Q8TEJ3 882 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-217ENST00000600236 SH3TC2Q8TF17 1288 aa13.98□□□□□ -0.17
HIF3A-217ENST00000600236 TRIM47Q96LD4 638 aa13.98□□□□□ -0.17
HIF3A-217ENST00000600236 PI4KBQ9UBF8 816 aa13.98□□□□□ -0.17
HIF3A-217ENST00000600236 AGTPBP1Q9UPW5 1226 aa13.98□□□□□ -0.17
HIF3A-217ENST00000600236 AK9Q5TCS8 1911 aa13.98□□□□□ -0.17
HIF3A-217ENST00000600236 MYCP01106 439 aaPredicted RBP13.97□□□□□ -0.17
HIF3A-217ENST00000600236 CYP2E1P05181 493 aaPredicted RBP13.97□□□□□ -0.17
HIF3A-217ENST00000600236 GRK4P32298 578 aa13.97□□□□□ -0.17
HIF3A-217ENST00000600236 CAP2P40123 477 aa13.97□□□□□ -0.17
HIF3A-217ENST00000600236 PPP4CP60510 307 aa13.97□□□□□ -0.17
HIF3A-217ENST00000600236 UBXN2AP68543 259 aa13.97□□□□□ -0.17
HIF3A-217ENST00000600236 CEP85Q6P2H3 762 aa13.97□□□□□ -0.17
HIF3A-217ENST00000600236 CRACR2BQ8N4Y2 399 aaPredicted RBP13.97□□□□□ -0.17
HIF3A-217ENST00000600236 PROCA1Q8NCQ7 364 aaPredicted RBP13.97□□□□□ -0.17
HIF3A-217ENST00000600236 ZNF280CQ8ND82 737 aa13.97□□□□□ -0.17
HIF3A-217ENST00000600236 DBNLQ9UJU6 430 aaKnown RBP13.97□□□□□ -0.17
HIF3A-217ENST00000600236 FAM196BA6NMK8 535 aa13.96□□□□□ -0.17
HIF3A-217ENST00000600236 USP17L5A8MUK1 530 aa13.96□□□□□ -0.17
HIF3A-217ENST00000600236 HLA-DOAP06340 250 aa13.96□□□□□ -0.17
HIF3A-217ENST00000600236 SLURP2P0DP57 97 aa13.96□□□□□ -0.17
HIF3A-217ENST00000600236 ZAP70P43403 619 aa13.96□□□□□ -0.17
HIF3A-217ENST00000600236 TMED8Q6PL24 325 aaPredicted RBP13.96□□□□□ -0.17
HIF3A-217ENST00000600236 NKX2-3Q8TAU0 364 aa13.96□□□□□ -0.17
HIF3A-217ENST00000600236 TGFBRAP1Q8WUH2 860 aa13.96□□□□□ -0.17
HIF3A-217ENST00000600236 CCDC8Q9H0W5 538 aaPredicted RBP13.96□□□□□ -0.17
HIF3A-217ENST00000600236 CHMP4BQ9H444 224 aaKnown RBP13.96□□□□□ -0.17
HIF3A-217ENST00000600236 BIN2Q9UBW5 565 aaPredicted RBP13.96□□□□□ -0.17
HIF3A-217ENST00000600236 FLT1P17948 1338 aa13.95□□□□□ -0.18
HIF3A-217ENST00000600236 TNPO2O14787 897 aaKnown RBP13.95□□□□□ -0.18
HIF3A-217ENST00000600236 IDH1O75874 414 aaKnown RBP13.95□□□□□ -0.18
HIF3A-217ENST00000600236 ASNSP08243 561 aa13.95□□□□□ -0.18
HIF3A-217ENST00000600236 CTGFP29279 349 aa13.95□□□□□ -0.18
HIF3A-217ENST00000600236 PRKCZQ05513 592 aa13.95□□□□□ -0.18
HIF3A-217ENST00000600236 SPP2Q13103 211 aa13.95□□□□□ -0.18
HIF3A-217ENST00000600236 CCDC84Q86UT8 332 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-217ENST00000600236 AACSQ86V21 672 aa13.95□□□□□ -0.18
HIF3A-217ENST00000600236 FOXP4Q8IVH2 680 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-217ENST00000600236 MAPKAPK5Q8IW41 473 aa13.95□□□□□ -0.18
HIF3A-217ENST00000600236 SLAIN1Q8ND83 568 aa13.95□□□□□ -0.18
HIF3A-217ENST00000600236 EAF2Q96CJ1 260 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-217ENST00000600236 GINM1Q9NU53 330 aa13.95□□□□□ -0.18
HIF3A-217ENST00000600236 TLR7Q9NYK1 1049 aaKnown RBP13.95□□□□□ -0.18
HIF3A-217ENST00000600236 HMMRO75330 724 aa13.94□□□□□ -0.18
HIF3A-217ENST00000600236 CYP7A1P22680 504 aa13.94□□□□□ -0.18
HIF3A-217ENST00000600236 GCLCP48506 637 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-217ENST00000600236 MAP3K12Q12852 859 aa13.94□□□□□ -0.18
HIF3A-217ENST00000600236 DOCK1Q14185 1865 aa13.94□□□□□ -0.18
HIF3A-217ENST00000600236 FAM110CQ1W6H9 321 aa13.94□□□□□ -0.18
HIF3A-217ENST00000600236 PANK1Q8TE04 598 aa13.94□□□□□ -0.18
HIF3A-217ENST00000600236 COA7Q96BR5 231 aa13.94□□□□□ -0.18
HIF3A-217ENST00000600236 PIH1D3Q9NQM4 214 aaKnown RBP13.94□□□□□ -0.18
HIF3A-217ENST00000600236 TMOD4Q9NZQ9 345 aa13.94□□□□□ -0.18
HIF3A-217ENST00000600236 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-217ENST00000600236 DDX19BQ9UMR2 479 aa13.94□□□□□ -0.18
HIF3A-217ENST00000600236 EXOC6BQ9Y2D4 811 aa13.94□□□□□ -0.18
HIF3A-217ENST00000600236 MAST2Q6P0Q8 1798 aa13.94□□□□□ -0.18
HIF3A-217ENST00000600236 RBBP6Q7Z6E9 1792 aaKnown RBP13.94□□□□□ -0.18
HIF3A-217ENST00000600236 USP5P45974 858 aa13.93□□□□□ -0.18
HIF3A-217ENST00000600236 HMGCS2P54868 508 aa13.93□□□□□ -0.18
HIF3A-217ENST00000600236 TTF1Q15361 905 aaPredicted RBP13.93□□□□□ -0.18
HIF3A-217ENST00000600236 TREML2Q5T2D2 321 aa13.93□□□□□ -0.18
HIF3A-217ENST00000600236 ADGRA1Q86SQ6 560 aa13.93□□□□□ -0.18
HIF3A-217ENST00000600236 RPAP2Q8IXW5 612 aaPredicted RBP13.93□□□□□ -0.18
HIF3A-217ENST00000600236 MTFR1Q15390 333 aa13.92□□□□□ -0.18
HIF3A-217ENST00000600236 SH3D19Q5HYK7 790 aa13.92□□□□□ -0.18
HIF3A-217ENST00000600236 CLASRPQ8N2M8 674 aaKnown RBP13.92□□□□□ -0.18
HIF3A-217ENST00000600236 ANKRD13CQ8N6S4 541 aa13.92□□□□□ -0.18
HIF3A-217ENST00000600236 MAGEB6Q8N7X4 407 aa13.92□□□□□ -0.18
HIF3A-217ENST00000600236 WDR18Q9BV38 432 aa13.92□□□□□ -0.18
HIF3A-217ENST00000600236 RNF208Q9H0X6 261 aa13.92□□□□□ -0.18
HIF3A-217ENST00000600236 PALD1Q9ULE6 856 aa13.92□□□□□ -0.18
HIF3A-217ENST00000600236 C19orf81C9J6K1 198 aa13.91□□□□□ -0.18
HIF3A-217ENST00000600236 ADCY3O60266 1144 aa13.91□□□□□ -0.18
HIF3A-217ENST00000600236 GJB1P08034 283 aa13.91□□□□□ -0.18
HIF3A-217ENST00000600236 CAPN2P17655 700 aa13.91□□□□□ -0.18
HIF3A-217ENST00000600236 FLT3LGP49771 235 aa13.91□□□□□ -0.18
HIF3A-217ENST00000600236 BACE1P56817 501 aa13.91□□□□□ -0.18
HIF3A-217ENST00000600236 DYNLL1P63167 89 aaKnown RBP13.91□□□□□ -0.18
HIF3A-217ENST00000600236 IRX3P78415 501 aaPredicted RBP13.91□□□□□ -0.18
HIF3A-217ENST00000600236 IRF5Q13568 498 aa13.91□□□□□ -0.18
HIF3A-217ENST00000600236 MTMR2Q13614 643 aa13.91□□□□□ -0.18
HIF3A-217ENST00000600236 METTL16Q86W50 562 aaKnown RBP13.91□□□□□ -0.18
HIF3A-217ENST00000600236 MIGA1Q8NAN2 632 aa13.91□□□□□ -0.18
HIF3A-217ENST00000600236 RHPN1Q8TCX5 695 aa13.91□□□□□ -0.18
HIF3A-217ENST00000600236 PXYLP1Q8TE99 480 aa13.91□□□□□ -0.18
HIF3A-217ENST00000600236 KIF1BPQ96EK5 621 aa13.91□□□□□ -0.18
HIF3A-217ENST00000600236 USP17L10C9JJH3 530 aa13.9□□□□□ -0.18
HIF3A-217ENST00000600236 IFIT2P09913 472 aaKnown RBP13.9□□□□□ -0.18
HIF3A-217ENST00000600236 CCL5P13501 91 aa13.9□□□□□ -0.18
HIF3A-217ENST00000600236 GJA8P48165 433 aa13.9□□□□□ -0.18
HIF3A-217ENST00000600236 RRP1BQ14684 758 aaKnown RBP13.9□□□□□ -0.18
HIF3A-217ENST00000600236 TTC6Q86TZ1 520 aa13.9□□□□□ -0.18
HIF3A-217ENST00000600236 IL1RAPL2Q9NP60 686 aa13.9□□□□□ -0.18
HIF3A-217ENST00000600236 SAP30BPQ9UHR5 308 aaKnown RBP13.9□□□□□ -0.18
HIF3A-217ENST00000600236 TAOK2Q9UL54 1235 aa13.9□□□□□ -0.18
HIF3A-217ENST00000600236 ZBTB21Q9ULJ3 1066 aa13.9□□□□□ -0.18
HIF3A-217ENST00000600236 GABRQQ9UN88 632 aa13.9□□□□□ -0.18
HIF3A-217ENST00000600236 RAB11FIP3O75154 756 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms