RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 SLURP2P0DP57 97 aa21.31■■□□□ 1
USHBP1-209ENST00000598570 PLEKHM2Q8IWE5 1019 aa21.31■■□□□ 1
USHBP1-209ENST00000598570 ZSCAN29Q8IWY8 852 aaPredicted RBP21.31■■□□□ 1
USHBP1-209ENST00000598570 PTPN18Q99952 460 aa21.31■■□□□ 1
USHBP1-209ENST00000598570 BEGAINQ9BUH8 593 aa21.31■■□□□ 1
USHBP1-209ENST00000598570 DNAJC18Q9H819 358 aa21.31■■□□□ 1
USHBP1-209ENST00000598570 PALD1Q9ULE6 856 aa21.31■■□□□ 1
USHBP1-209ENST00000598570 PHIPQ8WWQ0 1821 aa21.31■■□□□ 1
USHBP1-209ENST00000598570 GTF2A2P52657 109 aa21.3■■□□□ 1
USHBP1-209ENST00000598570 RRP1BQ14684 758 aaKnown RBP21.3■■□□□ 1
USHBP1-209ENST00000598570 TATDN1Q6P1N9 297 aa21.3■■□□□ 1
USHBP1-209ENST00000598570 IFNL1Q8IU54 200 aa21.3■■□□□ 1
USHBP1-209ENST00000598570 SCYL3Q8IZE3 742 aa21.3■■□□□ 1
USHBP1-209ENST00000598570 LCORLQ8N3X6 602 aa21.3■■□□□ 1
USHBP1-209ENST00000598570 CRNKL1Q9BZJ0 848 aaKnown RBP21.3■■□□□ 1
USHBP1-209ENST00000598570 LNPKQ9C0E8 428 aa21.3■■□□□ 1
USHBP1-209ENST00000598570 PUS7LQ9H0K6 701 aaKnown RBP21.3■■□□□ 1
USHBP1-209ENST00000598570 BCL11AQ9H165 835 aa21.3■■□□□ 1
USHBP1-209ENST00000598570 ATP8A2Q9NTI2 1148 aa21.3■■□□□ 1
USHBP1-209ENST00000598570 IRF6O14896 467 aa21.29■■□□□ 1
USHBP1-209ENST00000598570 ALDH1A1P00352 501 aa21.29■■□□□ 1
USHBP1-209ENST00000598570 PTPRAP18433 802 aa21.29■■□□□ 1
USHBP1-209ENST00000598570 IRX6P78412 446 aaPredicted RBP21.29■■□□□ 1
USHBP1-209ENST00000598570 GABPAQ06546 454 aa21.29■■□□□ 1
USHBP1-209ENST00000598570 MOGSQ13724 837 aa21.29■■□□□ 1
USHBP1-209ENST00000598570 STRBPQ96SI9 672 aaKnown RBP21.29■■□□□ 1
USHBP1-209ENST00000598570 ZCCHC17Q9NP64 241 aaKnown RBP21.29■■□□□ 1
USHBP1-209ENST00000598570 DCP1AQ9NPI6 582 aaPredicted RBP21.29■■□□□ 1
USHBP1-209ENST00000598570 GINM1Q9NU53 330 aa21.29■■□□□ 1
USHBP1-209ENST00000598570 ZBTB47Q9UFB7 747 aaPredicted RBP21.29■■□□□ 1
USHBP1-209ENST00000598570 DOCK1Q14185 1865 aa21.28■■□□□ 1
USHBP1-209ENST00000598570 IGF2BP3O00425 579 aaKnown RBP eCLIP21.28■■□□□ 1
USHBP1-209ENST00000598570 CXCL11O14625 94 aa21.28■■□□□ 1
USHBP1-209ENST00000598570 CAP2P40123 477 aa21.28■■□□□ 1
USHBP1-209ENST00000598570 BRI3BPQ8WY22 251 aa21.28■■□□□ 1
USHBP1-209ENST00000598570 APPBP2Q92624 585 aa21.28■■□□□ 1
USHBP1-209ENST00000598570 OSBP2Q969R2 916 aa21.28■■□□□ 1
USHBP1-209ENST00000598570 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.28■■□□□ 1
USHBP1-209ENST00000598570 AFG3L2Q9Y4W6 797 aa21.28■■□□□ 1
USHBP1-209ENST00000598570 MBD4O95243 580 aa21.27■■□□□ 1
USHBP1-209ENST00000598570 USP5P45974 858 aa21.27■■□□□ 1
USHBP1-209ENST00000598570 LBX1P52954 281 aa21.27■■□□□ 1
USHBP1-209ENST00000598570 LRRFIP1Q32MZ4 808 aaKnown RBP21.27■■□□□ 1
USHBP1-209ENST00000598570 GIMAP6Q6P9H5 292 aa21.27■■□□□ 1
USHBP1-209ENST00000598570 TTC6Q86TZ1 520 aa21.27■■□□□ 1
USHBP1-209ENST00000598570 EVI5LQ96CN4 794 aa21.27■■□□□ 1
USHBP1-209ENST00000598570 ARMT1Q9H993 441 aa21.27■■□□□ 1
USHBP1-209ENST00000598570 TRPA1O75762 1119 aa21.26■□□□□ 0.99
USHBP1-209ENST00000598570 MKRN3Q13064 507 aaKnown RBP21.26■□□□□ 0.99
USHBP1-209ENST00000598570 SNAPC2Q13487 334 aa21.26■□□□□ 0.99
USHBP1-209ENST00000598570 ZMYM1Q5SVZ6 1142 aa21.26■□□□□ 0.99
USHBP1-209ENST00000598570 OTUD5Q96G74 571 aa21.26■□□□□ 0.99
USHBP1-209ENST00000598570 TBC1D2Q9BYX2 928 aa21.26■□□□□ 0.99
USHBP1-209ENST00000598570 PRKAB2O43741 272 aa21.25■□□□□ 0.99
USHBP1-209ENST00000598570 CETPP11597 493 aa21.25■□□□□ 0.99
USHBP1-209ENST00000598570 PLCD1P51178 756 aa21.25■□□□□ 0.99
USHBP1-209ENST00000598570 B4GALNT3Q6L9W6 998 aa21.25■□□□□ 0.99
USHBP1-209ENST00000598570 SERPINB13Q9UIV8 391 aa21.25■□□□□ 0.99
USHBP1-209ENST00000598570 PTPRFP10586 1907 aa21.24■□□□□ 0.99
USHBP1-209ENST00000598570 FAM196BA6NMK8 535 aa21.24■□□□□ 0.99
USHBP1-209ENST00000598570 HLA-DOAP06340 250 aa21.24■□□□□ 0.99
USHBP1-209ENST00000598570 JAG1P78504 1218 aa21.24■□□□□ 0.99
USHBP1-209ENST00000598570 COL13A1Q5TAT6 717 aaPredicted RBP21.24■□□□□ 0.99
USHBP1-209ENST00000598570 SDR42E1Q8WUS8 393 aa21.24■□□□□ 0.99
USHBP1-209ENST00000598570 SAP30BPQ9UHR5 308 aaKnown RBP21.24■□□□□ 0.99
USHBP1-209ENST00000598570 NAV1Q8NEY1 1877 aa21.24■□□□□ 0.99
USHBP1-209ENST00000598570 ATAD5Q96QE3 1844 aa21.23■□□□□ 0.99
USHBP1-209ENST00000598570 GSG1L2A8MUP6 293 aa21.23■□□□□ 0.99
USHBP1-209ENST00000598570 PDE4AP27815 886 aa21.23■□□□□ 0.99
USHBP1-209ENST00000598570 SBK1Q52WX2 424 aa21.23■□□□□ 0.99
USHBP1-209ENST00000598570 C12orf60Q5U649 245 aa21.23■□□□□ 0.99
USHBP1-209ENST00000598570 WDR18Q9BV38 432 aa21.23■□□□□ 0.99
USHBP1-209ENST00000598570 PICK1Q9NRD5 415 aa21.23■□□□□ 0.99
USHBP1-209ENST00000598570 ZHX2Q9Y6X8 837 aa21.23■□□□□ 0.99
USHBP1-209ENST00000598570 A0A0G2JLL6 359 aaPredicted RBP21.22■□□□□ 0.99
USHBP1-209ENST00000598570 OTUD7BQ6GQQ9 843 aa21.22■□□□□ 0.99
USHBP1-209ENST00000598570 PRRT2Q7Z6L0 340 aaPredicted RBP21.22■□□□□ 0.99
USHBP1-209ENST00000598570 R3HDMLQ9H3Y0 253 aa21.22■□□□□ 0.99
USHBP1-209ENST00000598570 BAZ2AQ9UIF9 1905 aaKnown RBP21.21■□□□□ 0.99
USHBP1-209ENST00000598570 CCL15-CCL14A0A0B4J2E2 113 aa21.21■□□□□ 0.99
USHBP1-209ENST00000598570 ASNSP08243 561 aa21.21■□□□□ 0.99
USHBP1-209ENST00000598570 GNAT2P19087 354 aa21.21■□□□□ 0.99
USHBP1-209ENST00000598570 SHMT1P34896 483 aa21.21■□□□□ 0.99
USHBP1-209ENST00000598570 CCL15Q16663 113 aa21.21■□□□□ 0.99
USHBP1-209ENST00000598570 GPAT2Q6NUI2 795 aa21.21■□□□□ 0.99
USHBP1-209ENST00000598570 ANKRD23Q86SG2 305 aa21.21■□□□□ 0.99
USHBP1-209ENST00000598570 FAM43AQ8N2R8 423 aa21.21■□□□□ 0.99
USHBP1-209ENST00000598570 MCM9Q9NXL9 1143 aa21.21■□□□□ 0.99
USHBP1-209ENST00000598570 CASP8AP2Q9UKL3 1982 aa21.21■□□□□ 0.99
USHBP1-209ENST00000598570 BTBD19C9JJ37 291 aa21.2■□□□□ 0.98
USHBP1-209ENST00000598570 M0R2C6 588 aa21.2■□□□□ 0.98
USHBP1-209ENST00000598570 GPAA1O43292 621 aa21.2■□□□□ 0.98
USHBP1-209ENST00000598570 SH3D19Q5HYK7 790 aa21.2■□□□□ 0.98
USHBP1-209ENST00000598570 CTR9Q6PD62 1173 aa21.2■□□□□ 0.98
USHBP1-209ENST00000598570 FSD1Q9BTV5 496 aa21.2■□□□□ 0.98
USHBP1-209ENST00000598570 TSKSQ9UJT2 592 aa21.2■□□□□ 0.98
USHBP1-209ENST00000598570 SLC45A1Q9Y2W3 748 aa21.2■□□□□ 0.98
USHBP1-209ENST00000598570 SLC4A4Q9Y6R1 1079 aa21.2■□□□□ 0.98
USHBP1-209ENST00000598570 USP17L5A8MUK1 530 aa21.19■□□□□ 0.98
USHBP1-209ENST00000598570 PATL2C9JE40 543 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms