RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 HPS5Q9UPZ3 1129 aa17.75■□□□□ 0.43
XRCC1-208ENST00000598422 TRIM75PA6NK02 468 aa17.74■□□□□ 0.43
XRCC1-208ENST00000598422 PDHXO00330 501 aa17.74■□□□□ 0.43
XRCC1-208ENST00000598422 PDE6AP16499 860 aa17.74■□□□□ 0.43
XRCC1-208ENST00000598422 SLC9C2Q5TAH2 1124 aa17.74■□□□□ 0.43
XRCC1-208ENST00000598422 FASTKD5Q7L8L6 764 aaKnown RBP17.74■□□□□ 0.43
XRCC1-208ENST00000598422 BOLA2Q9H3K6 86 aa17.74■□□□□ 0.43
XRCC1-208ENST00000598422 EFCC1Q9HA90 598 aa17.74■□□□□ 0.43
XRCC1-208ENST00000598422 DOCK2Q92608 1830 aa17.74■□□□□ 0.43
XRCC1-208ENST00000598422 SMARCA5O60264 1052 aaPredicted RBP17.73■□□□□ 0.43
XRCC1-208ENST00000598422 TLR2O60603 784 aa17.73■□□□□ 0.43
XRCC1-208ENST00000598422 ATP5JP18859 108 aa17.73■□□□□ 0.43
XRCC1-208ENST00000598422 KIF22Q14807 665 aa17.73■□□□□ 0.43
XRCC1-208ENST00000598422 SLC4A8Q2Y0W8 1093 aa17.73■□□□□ 0.43
XRCC1-208ENST00000598422 GADL1Q6ZQY3 521 aa17.73■□□□□ 0.43
XRCC1-208ENST00000598422 OTOP1Q7RTM1 612 aa17.73■□□□□ 0.43
XRCC1-208ENST00000598422 GPATCH3Q96I76 525 aa17.73■□□□□ 0.43
XRCC1-208ENST00000598422 PARK7Q99497 189 aaKnown RBP17.73■□□□□ 0.43
XRCC1-208ENST00000598422 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.73■□□□□ 0.43
XRCC1-208ENST00000598422 PAG1Q9NWQ8 432 aa17.73■□□□□ 0.43
XRCC1-208ENST00000598422 PALD1Q9ULE6 856 aa17.73■□□□□ 0.43
XRCC1-208ENST00000598422 A0A0G2JLL6 359 aaPredicted RBP17.72■□□□□ 0.43
XRCC1-208ENST00000598422 MAGEB6P1A0A0J9YX57 407 aa17.72■□□□□ 0.43
XRCC1-208ENST00000598422 CAP2P40123 477 aa17.72■□□□□ 0.43
XRCC1-208ENST00000598422 PRRT2Q7Z6L0 340 aaPredicted RBP17.72■□□□□ 0.43
XRCC1-208ENST00000598422 CCDC84Q86UT8 332 aaPredicted RBP17.72■□□□□ 0.43
XRCC1-208ENST00000598422 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.72■□□□□ 0.43
XRCC1-208ENST00000598422 AFG3L2Q9Y4W6 797 aa17.72■□□□□ 0.43
XRCC1-208ENST00000598422 ZNF532Q9HCE3 1301 aa17.72■□□□□ 0.43
XRCC1-208ENST00000598422 LAMB1P07942 1786 aa17.71■□□□□ 0.43
XRCC1-208ENST00000598422 FOXP4Q8IVH2 680 aaPredicted RBP17.71■□□□□ 0.43
XRCC1-208ENST00000598422 EDC3Q96F86 508 aaKnown RBP17.71■□□□□ 0.43
XRCC1-208ENST00000598422 HAUS7Q99871 368 aa17.71■□□□□ 0.43
XRCC1-208ENST00000598422 TBC1D2Q9BYX2 928 aa17.71■□□□□ 0.43
XRCC1-208ENST00000598422 CRNKL1Q9BZJ0 848 aaKnown RBP17.71■□□□□ 0.43
XRCC1-208ENST00000598422 DCTPP1Q9H773 170 aa17.71■□□□□ 0.43
XRCC1-208ENST00000598422 AK9Q5TCS8 1911 aa17.7■□□□□ 0.42
XRCC1-208ENST00000598422 RIOK1Q9BRS2 568 aaKnown RBP17.7■□□□□ 0.42
XRCC1-208ENST00000598422 AS3MTQ9HBK9 375 aa17.7■□□□□ 0.42
XRCC1-208ENST00000598422 ECHDC1Q9NTX5 307 aa17.7■□□□□ 0.42
XRCC1-208ENST00000598422 CPA4Q9UI42 421 aa17.7■□□□□ 0.42
XRCC1-208ENST00000598422 USP17L5A8MUK1 530 aa17.69■□□□□ 0.42
XRCC1-208ENST00000598422 ASNSP08243 561 aa17.69■□□□□ 0.42
XRCC1-208ENST00000598422 SOX10P56693 466 aa17.69■□□□□ 0.42
XRCC1-208ENST00000598422 MOGSQ13724 837 aa17.69■□□□□ 0.42
XRCC1-208ENST00000598422 GPAT2Q6NUI2 795 aa17.69■□□□□ 0.42
XRCC1-208ENST00000598422 TTC6Q86TZ1 520 aa17.69■□□□□ 0.42
XRCC1-208ENST00000598422 ZNF280CQ8ND82 737 aa17.69■□□□□ 0.42
XRCC1-208ENST00000598422 CRBNQ96SW2 442 aa17.69■□□□□ 0.42
XRCC1-208ENST00000598422 PCDHB15Q9Y5E8 787 aa17.69■□□□□ 0.42
XRCC1-208ENST00000598422 LACTBP83111 547 aaPredicted RBP17.68■□□□□ 0.42
XRCC1-208ENST00000598422 SPP2Q13103 211 aa17.68■□□□□ 0.42
XRCC1-208ENST00000598422 SMCR8Q8TEV9 937 aaPredicted RBP17.68■□□□□ 0.42
XRCC1-208ENST00000598422 DNAJC18Q9H819 358 aa17.68■□□□□ 0.42
XRCC1-208ENST00000598422 ZBTB47Q9UFB7 747 aaPredicted RBP17.68■□□□□ 0.42
XRCC1-208ENST00000598422 SERPINB13Q9UIV8 391 aa17.68■□□□□ 0.42
XRCC1-208ENST00000598422 PTPN22Q9Y2R2 807 aa17.68■□□□□ 0.42
XRCC1-208ENST00000598422 GDF11O95390 407 aa17.67■□□□□ 0.42
XRCC1-208ENST00000598422 POLR3DP05423 398 aaPredicted RBP17.67■□□□□ 0.42
XRCC1-208ENST00000598422 CYP2C8P10632 490 aa17.67■□□□□ 0.42
XRCC1-208ENST00000598422 ADD2P35612 726 aa17.67■□□□□ 0.42
XRCC1-208ENST00000598422 RRP1BQ14684 758 aaKnown RBP17.67■□□□□ 0.42
XRCC1-208ENST00000598422 ZSCAN25Q6NSZ9 544 aa17.67■□□□□ 0.42
XRCC1-208ENST00000598422 METTL16Q86W50 562 aaKnown RBP17.67■□□□□ 0.42
XRCC1-208ENST00000598422 GINM1Q9NU53 330 aa17.67■□□□□ 0.42
XRCC1-208ENST00000598422 AGTPBP1Q9UPW5 1226 aa17.67■□□□□ 0.42
XRCC1-208ENST00000598422 SLC45A1Q9Y2W3 748 aa17.67■□□□□ 0.42
XRCC1-208ENST00000598422 TCRBV5S4A2TA0A5A2 114 aa17.66■□□□□ 0.42
XRCC1-208ENST00000598422 ECM2O94769 699 aaPredicted RBP17.66■□□□□ 0.42
XRCC1-208ENST00000598422 HMGCS2P54868 508 aa17.66■□□□□ 0.42
XRCC1-208ENST00000598422 PABPC4Q13310 644 aaKnown RBP eCLIP17.66■□□□□ 0.42
XRCC1-208ENST00000598422 C17orf99Q6UX52 265 aa17.66■□□□□ 0.42
XRCC1-208ENST00000598422 LCORLQ8N3X6 602 aa17.66■□□□□ 0.42
XRCC1-208ENST00000598422 PROCA1Q8NCQ7 364 aaPredicted RBP17.66■□□□□ 0.42
XRCC1-208ENST00000598422 EHD4Q9H223 541 aa17.66■□□□□ 0.42
XRCC1-208ENST00000598422 PNMA3Q9UL41 463 aa17.66■□□□□ 0.42
XRCC1-208ENST00000598422 ZBTB21Q9ULJ3 1066 aa17.66■□□□□ 0.42
XRCC1-208ENST00000598422 MBD4O95243 580 aa17.65■□□□□ 0.42
XRCC1-208ENST00000598422 MLLT1Q03111 559 aaPredicted RBP17.65■□□□□ 0.42
XRCC1-208ENST00000598422 DDRGK1Q96HY6 314 aa17.65■□□□□ 0.42
XRCC1-208ENST00000598422 ARHGAP39Q9C0H5 1083 aa17.65■□□□□ 0.42
XRCC1-208ENST00000598422 ARMT1Q9H993 441 aa17.65■□□□□ 0.42
XRCC1-208ENST00000598422 MCM9Q9NXL9 1143 aa17.65■□□□□ 0.42
XRCC1-208ENST00000598422 TMOD4Q9NZQ9 345 aa17.65■□□□□ 0.42
XRCC1-208ENST00000598422 ADGRA2Q96PE1 1338 aa17.65■□□□□ 0.42
XRCC1-208ENST00000598422 DOCK1Q14185 1865 aa17.65■□□□□ 0.42
XRCC1-208ENST00000598422 FMNL1O95466 1100 aaPredicted RBP17.64■□□□□ 0.41
XRCC1-208ENST00000598422 GNRH1P01148 92 aa17.64■□□□□ 0.41
XRCC1-208ENST00000598422 CAP1Q01518 475 aa17.64■□□□□ 0.41
XRCC1-208ENST00000598422 MTMR2Q13614 643 aa17.64■□□□□ 0.41
XRCC1-208ENST00000598422 UBE3CQ15386 1083 aa17.64■□□□□ 0.41
XRCC1-208ENST00000598422 TSHZ3Q63HK5 1081 aa17.64■□□□□ 0.41
XRCC1-208ENST00000598422 SDR42E1Q8WUS8 393 aa17.64■□□□□ 0.41
XRCC1-208ENST00000598422 WDR18Q9BV38 432 aa17.64■□□□□ 0.41
XRCC1-208ENST00000598422 ERC2O15083 957 aa17.63■□□□□ 0.41
XRCC1-208ENST00000598422 GH2P01242 217 aa17.63■□□□□ 0.41
XRCC1-208ENST00000598422 OSBPP22059 807 aa17.63■□□□□ 0.41
XRCC1-208ENST00000598422 HOXD10P28358 340 aa17.63■□□□□ 0.41
XRCC1-208ENST00000598422 PSMC4P43686 418 aa17.63■□□□□ 0.41
XRCC1-208ENST00000598422 RGS19P49795 217 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms