RNA–Protein interactions for RNA: ENST00000597656.5

KHSRP-208, Transcript of KH-type splicing regulatory protein, human

TSL 5

Gene KHSRP, Length 328 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KHSRP-208	ENST00000597656	PRDM6	Q9NQX0	595 aa		10.04	□□□□□ -0.8
KHSRP-208	ENST00000597656	DIAPH3	Q9NSV4	1193 aa		10.04	□□□□□ -0.8
KHSRP-208	ENST00000597656	USP17L12	C9JPN9	530 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	USP17L21	D6R901	530 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	UBE2Q2L	H0YL09	131 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	PPP1R12B	O60237	982 aa	Predicted RBP	10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	COL9A1	P20849	921 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	PLCD1	P51178	756 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	FKBP1B	P68106	108 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	EVX2	Q03828	476 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	PRKG1	Q13976	671 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	MAP3K11	Q16584	847 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	SLC4A8	Q2Y0W8	1093 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	LDLRAD1	Q5T700	205 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	VPS53	Q5VIR6	699 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	GIMAP6	Q6P9H5	292 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	HOOK2	Q96ED9	719 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	MCM9	Q9NXL9	1143 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	PI4KB	Q9UBF8	816 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	TLL2	Q9Y6L7	1015 aa		10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	POLR2A	P24928	1970 aa	Known RBP	10.03	□□□□□ -0.8
KHSRP-208	ENST00000597656	CYP2D7	A0A087X1C5	515 aa		10.02	□□□□□ -0.81
KHSRP-208	ENST00000597656	RASSF10	A6NK89	507 aa		10.02	□□□□□ -0.81
KHSRP-208	ENST00000597656	PHF20L1	A8MW92	1017 aa		10.02	□□□□□ -0.81
KHSRP-208	ENST00000597656	SMIM22	K7EJ46	135 aa		10.02	□□□□□ -0.81
KHSRP-208	ENST00000597656	TBC1D12	O60347	775 aa		10.02	□□□□□ -0.81
KHSRP-208	ENST00000597656	APP	P05067	770 aa		10.02	□□□□□ -0.81
KHSRP-208	ENST00000597656	CYP2D6	P10635	497 aa		10.02	□□□□□ -0.81
KHSRP-208	ENST00000597656	C12orf60	Q5U649	245 aa		10.02	□□□□□ -0.81
KHSRP-208	ENST00000597656	CTR9	Q6PD62	1173 aa		10.02	□□□□□ -0.81
KHSRP-208	ENST00000597656	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.02	□□□□□ -0.81
KHSRP-208	ENST00000597656	IFNL3	Q8IZI9	196 aa		10.02	□□□□□ -0.81
KHSRP-208	ENST00000597656	ZNF112	Q9UJU3	913 aa		10.02	□□□□□ -0.81
KHSRP-208	ENST00000597656	ANGEL1	Q9UNK9	670 aa	Known RBP	10.02	□□□□□ -0.81
KHSRP-208	ENST00000597656	CCDC171	Q6TFL3	1326 aa		10.02	□□□□□ -0.81
KHSRP-208	ENST00000597656	FAM196B	A6NMK8	535 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	SGSM2	O43147	1006 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	CA12	O43570	354 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	POLR3D	P05423	398 aa	Predicted RBP	10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	HLA-DOA	P06340	250 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	HSPD1	P10809	573 aa	Known RBP	10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	HUNK	P57058	714 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	GABPA	Q06546	454 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	TTLL12	Q14166	644 aa	Predicted RBP	10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	ALX1	Q15699	326 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	SBK1	Q52WX2	424 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	DCAF15	Q66K64	600 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	ARMC9	Q7Z3E5	817 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	TTC6	Q86TZ1	520 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.01	□□□□□ -0.81	1e-21	■■□□□ 12.8
KHSRP-208	ENST00000597656	FAM122A	Q96E09	287 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	DDRGK1	Q96HY6	314 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	HHIPL1	Q96JK4	782 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	ZNF341	Q9BYN7	854 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	EHD4	Q9H223	541 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	DNAJC18	Q9H819	358 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	HERC5	Q9UII4	1024 aa	Known RBP	10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	ABT1	Q9ULW3	272 aa	Known RBP	10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	MYH7	P12883	1935 aa		10.01	□□□□□ -0.81
KHSRP-208	ENST00000597656	UNCX	A6NJT0	531 aa		10	□□□□□ -0.81
KHSRP-208	ENST00000597656	FGA	P02671	866 aa		10	□□□□□ -0.81
KHSRP-208	ENST00000597656	INPP5B	P32019	993 aa		10	□□□□□ -0.81
KHSRP-208	ENST00000597656	PLA2G5	P39877	138 aa		10	□□□□□ -0.81
KHSRP-208	ENST00000597656	IREB2	P48200	963 aa	Known RBP	10	□□□□□ -0.81
KHSRP-208	ENST00000597656	MFAP1	P55081	439 aa	Known RBP	10	□□□□□ -0.81
KHSRP-208	ENST00000597656	MAP3K9	P80192	1104 aa		10	□□□□□ -0.81
KHSRP-208	ENST00000597656	RRP1B	Q14684	758 aa	Known RBP	10	□□□□□ -0.81
KHSRP-208	ENST00000597656	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10	□□□□□ -0.81
KHSRP-208	ENST00000597656	RUFY2	Q8WXA3	655 aa		10	□□□□□ -0.81
KHSRP-208	ENST00000597656	ZKSCAN4	Q969J2	545 aa	Predicted RBP	10	□□□□□ -0.81
KHSRP-208	ENST00000597656	CLMN	Q96JQ2	1002 aa		10	□□□□□ -0.81
KHSRP-208	ENST00000597656	WRNIP1	Q96S55	665 aa		10	□□□□□ -0.81
KHSRP-208	ENST00000597656	NACAP1	Q9BZK3	213 aa		10	□□□□□ -0.81
KHSRP-208	ENST00000597656	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10	□□□□□ -0.81
KHSRP-208	ENST00000597656	SERPINB13	Q9UIV8	391 aa		10	□□□□□ -0.81
KHSRP-208	ENST00000597656	PAPPA2	Q9BXP8	1791 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	FOCAD	Q5VW36	1801 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	MINDY4B	A8MYZ0	360 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	CDC45	O75419	566 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	SHMT1	P34896	483 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	TDO2	P48775	406 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	JAG1	P78504	1218 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	VGLL4	Q14135	290 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	TATDN1	Q6P1N9	297 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	ANKRD13A	Q8IZ07	590 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	DYNLL2	Q96FJ2	89 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	ESYT1	Q9BSJ8	1104 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	DSCC1	Q9BVC3	393 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	NAPB	Q9H115	298 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	ARPP21	Q9UBL0	812 aa	Predicted RBP	9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	RAD50	Q92878	1312 aa		9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	DDX60L	Q5H9U9	1706 aa	Known RBP	9.99	□□□□□ -0.81
KHSRP-208	ENST00000597656	CDK5RAP2	Q96SN8	1893 aa		9.98	□□□□□ -0.81
KHSRP-208	ENST00000597656	CTNND1	O60716	968 aa	Known RBP	9.98	□□□□□ -0.81
KHSRP-208	ENST00000597656	CAP2	P40123	477 aa		9.98	□□□□□ -0.81
KHSRP-208	ENST00000597656	PTH1R	Q03431	593 aa		9.98	□□□□□ -0.81
KHSRP-208	ENST00000597656	SHROOM1	Q2M3G4	852 aa	Predicted RBP	9.98	□□□□□ -0.81
KHSRP-208	ENST00000597656	RGMB	Q6NW40	437 aa		9.98	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 106 ms