RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 HMMRO75330 724 aa15.94■□□□□ 0.14
LIG1-212ENST00000596549 IDH1O75874 414 aaKnown RBP15.94■□□□□ 0.14
LIG1-212ENST00000596549 GPAT2Q6NUI2 795 aa15.94■□□□□ 0.14
LIG1-212ENST00000596549 MAPKAPK5Q8IW41 473 aa15.94■□□□□ 0.14
LIG1-212ENST00000596549 AFG3L2Q9Y4W6 797 aa15.94■□□□□ 0.14
LIG1-212ENST00000596549 A0A0G2JLL6 359 aaPredicted RBP15.93■□□□□ 0.14
LIG1-212ENST00000596549 PDHXO00330 501 aa15.93■□□□□ 0.14
LIG1-212ENST00000596549 BAG3O95817 575 aa15.93■□□□□ 0.14
LIG1-212ENST00000596549 CYP7A1P22680 504 aa15.93■□□□□ 0.14
LIG1-212ENST00000596549 PRRT2Q7Z6L0 340 aaPredicted RBP15.93■□□□□ 0.14
LIG1-212ENST00000596549 CLASRPQ8N2M8 674 aaKnown RBP15.93■□□□□ 0.14
LIG1-212ENST00000596549 MAGEB6Q8N7X4 407 aa15.93■□□□□ 0.14
LIG1-212ENST00000596549 TGFBRAP1Q8WUH2 860 aa15.93■□□□□ 0.14
LIG1-212ENST00000596549 NOL10Q9BSC4 688 aaKnown RBP15.93■□□□□ 0.14
LIG1-212ENST00000596549 ARHGAP39Q9C0H5 1083 aa15.93■□□□□ 0.14
LIG1-212ENST00000596549 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.93■□□□□ 0.14
LIG1-212ENST00000596549 PICK1Q9NRD5 415 aa15.93■□□□□ 0.14
LIG1-212ENST00000596549 ZHX2Q9Y6X8 837 aa15.93■□□□□ 0.14
LIG1-212ENST00000596549 BRCA2P51587 3418 aa15.92■□□□□ 0.14
LIG1-212ENST00000596549 CXCL11O14625 94 aa15.92■□□□□ 0.14
LIG1-212ENST00000596549 PLCG2P16885 1265 aa15.92■□□□□ 0.14
LIG1-212ENST00000596549 CTGFP29279 349 aa15.92■□□□□ 0.14
LIG1-212ENST00000596549 MLLT1Q03111 559 aaPredicted RBP15.92■□□□□ 0.14
LIG1-212ENST00000596549 MIGA1Q8NAN2 632 aa15.92■□□□□ 0.14
LIG1-212ENST00000596549 EFCC1Q9HA90 598 aa15.92■□□□□ 0.14
LIG1-212ENST00000596549 PTPN22Q9Y2R2 807 aa15.92■□□□□ 0.14
LIG1-212ENST00000596549 RAB11FIP3O75154 756 aa15.91■□□□□ 0.14
LIG1-212ENST00000596549 LACTBP83111 547 aaPredicted RBP15.91■□□□□ 0.14
LIG1-212ENST00000596549 SHROOM1Q2M3G4 852 aaPredicted RBP15.91■□□□□ 0.14
LIG1-212ENST00000596549 C17orf99Q6UX52 265 aa15.91■□□□□ 0.14
LIG1-212ENST00000596549 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.91■□□□□ 0.14
LIG1-212ENST00000596549 EDC3Q96F86 508 aaKnown RBP15.91■□□□□ 0.14
LIG1-212ENST00000596549 CHMP4BQ9H444 224 aaKnown RBP15.91■□□□□ 0.14
LIG1-212ENST00000596549 HERC5Q9UII4 1024 aaKnown RBP15.91■□□□□ 0.14
LIG1-212ENST00000596549 PLXNB2O15031 1838 aa15.9■□□□□ 0.14
LIG1-212ENST00000596549 TRIM75PA6NK02 468 aa15.9■□□□□ 0.14
LIG1-212ENST00000596549 CAP2P40123 477 aa15.9■□□□□ 0.14
LIG1-212ENST00000596549 JAG1P78504 1218 aa15.9■□□□□ 0.14
LIG1-212ENST00000596549 SLC4A8Q2Y0W8 1093 aa15.9■□□□□ 0.14
LIG1-212ENST00000596549 RIOK1Q9BRS2 568 aaKnown RBP15.9■□□□□ 0.14
LIG1-212ENST00000596549 DHX36Q9H2U1 1008 aaKnown RBP15.9■□□□□ 0.14
LIG1-212ENST00000596549 PI4KBQ9UBF8 816 aa15.9■□□□□ 0.14
LIG1-212ENST00000596549 SAP30BPQ9UHR5 308 aaKnown RBP15.9■□□□□ 0.14
LIG1-212ENST00000596549 CPA4Q9UI42 421 aa15.9■□□□□ 0.14
LIG1-212ENST00000596549 PALD1Q9ULE6 856 aa15.9■□□□□ 0.14
LIG1-212ENST00000596549 IFIT2P09913 472 aaKnown RBP15.89■□□□□ 0.13
LIG1-212ENST00000596549 CYP2C8P10632 490 aa15.89■□□□□ 0.13
LIG1-212ENST00000596549 MAP3K12Q12852 859 aa15.89■□□□□ 0.13
LIG1-212ENST00000596549 METTL16Q86W50 562 aaKnown RBP15.89■□□□□ 0.13
LIG1-212ENST00000596549 PARK7Q99497 189 aaKnown RBP15.89■□□□□ 0.13
LIG1-212ENST00000596549 DNAJC2Q99543 621 aaKnown RBP15.89■□□□□ 0.13
LIG1-212ENST00000596549 BCL11AQ9H165 835 aa15.89■□□□□ 0.13
LIG1-212ENST00000596549 PTCH2Q9Y6C5 1203 aa15.89■□□□□ 0.13
LIG1-212ENST00000596549 GOLIM4O00461 696 aa15.88■□□□□ 0.13
LIG1-212ENST00000596549 ECM2O94769 699 aaPredicted RBP15.88■□□□□ 0.13
LIG1-212ENST00000596549 PDE6AP16499 860 aa15.88■□□□□ 0.13
LIG1-212ENST00000596549 GADL1Q6ZQY3 521 aa15.88■□□□□ 0.13
LIG1-212ENST00000596549 TCRBV5S4A2TA0A5A2 114 aa15.87■□□□□ 0.13
LIG1-212ENST00000596549 SMARCA5O60264 1052 aaPredicted RBP15.87■□□□□ 0.13
LIG1-212ENST00000596549 BCRP11274 1271 aa15.87■□□□□ 0.13
LIG1-212ENST00000596549 TTF1Q15361 905 aaPredicted RBP15.87■□□□□ 0.13
LIG1-212ENST00000596549 TREML2Q5T2D2 321 aa15.87■□□□□ 0.13
LIG1-212ENST00000596549 FASTKD5Q7L8L6 764 aaKnown RBP15.87■□□□□ 0.13
LIG1-212ENST00000596549 ARMC5Q96C12 935 aa15.87■□□□□ 0.13
LIG1-212ENST00000596549 LRRCC1Q9C099 1032 aa15.87■□□□□ 0.13
LIG1-212ENST00000596549 AGTPBP1Q9UPW5 1226 aa15.87■□□□□ 0.13
LIG1-212ENST00000596549 ZNF532Q9HCE3 1301 aa15.87■□□□□ 0.13
LIG1-212ENST00000596549 PARP14Q460N5 1801 aa15.87■□□□□ 0.13
LIG1-212ENST00000596549 GDF11O95390 407 aa15.86■□□□□ 0.13
LIG1-212ENST00000596549 CHGBP05060 677 aa15.86■□□□□ 0.13
LIG1-212ENST00000596549 RRP1P56182 461 aaKnown RBP15.86■□□□□ 0.13
LIG1-212ENST00000596549 EVX2Q03828 476 aa15.86■□□□□ 0.13
LIG1-212ENST00000596549 SLFNL1Q499Z3 407 aa15.86■□□□□ 0.13
LIG1-212ENST00000596549 TMED8Q6PL24 325 aaPredicted RBP15.86■□□□□ 0.13
LIG1-212ENST00000596549 CERS3Q8IU89 383 aa15.86■□□□□ 0.13
LIG1-212ENST00000596549 TRIM47Q96LD4 638 aa15.86■□□□□ 0.13
LIG1-212ENST00000596549 BOLA2Q9H3K6 86 aa15.86■□□□□ 0.13
LIG1-212ENST00000596549 SLC45A1Q9Y2W3 748 aa15.86■□□□□ 0.13
LIG1-212ENST00000596549 A0A0G2JMZ2 1700 aa15.85■□□□□ 0.13
LIG1-212ENST00000596549 DOCK3Q8IZD9 2030 aa15.85■□□□□ 0.13
LIG1-212ENST00000596549 POTEFA5A3E0 1075 aa15.85■□□□□ 0.13
LIG1-212ENST00000596549 ATP5JP18859 108 aa15.85■□□□□ 0.13
LIG1-212ENST00000596549 USP5P45974 858 aa15.85■□□□□ 0.13
LIG1-212ENST00000596549 SPP2Q13103 211 aa15.85■□□□□ 0.13
LIG1-212ENST00000596549 SLC9C2Q5TAH2 1124 aa15.85■□□□□ 0.13
LIG1-212ENST00000596549 LCORLQ8N3X6 602 aa15.85■□□□□ 0.13
LIG1-212ENST00000596549 CRACR2BQ8N4Y2 399 aaPredicted RBP15.85■□□□□ 0.13
LIG1-212ENST00000596549 PROCA1Q8NCQ7 364 aaPredicted RBP15.85■□□□□ 0.13
LIG1-212ENST00000596549 ZNF280CQ8ND82 737 aa15.85■□□□□ 0.13
LIG1-212ENST00000596549 PAG1Q9NWQ8 432 aa15.85■□□□□ 0.13
LIG1-212ENST00000596549 ZBTB21Q9ULJ3 1066 aa15.85■□□□□ 0.13
LIG1-212ENST00000596549 GREB1LQ9C091 1923 aaPredicted RBP15.85■□□□□ 0.13
LIG1-212ENST00000596549 MAGEB6P1A0A0J9YX57 407 aa15.84■□□□□ 0.13
LIG1-212ENST00000596549 USP17L5A8MUK1 530 aa15.84■□□□□ 0.13
LIG1-212ENST00000596549 HLA-DOAP06340 250 aa15.84■□□□□ 0.13
LIG1-212ENST00000596549 HMGCS2P54868 508 aa15.84■□□□□ 0.13
LIG1-212ENST00000596549 SH3D19Q5HYK7 790 aa15.84■□□□□ 0.13
LIG1-212ENST00000596549 FOXP4Q8IVH2 680 aaPredicted RBP15.84■□□□□ 0.13
LIG1-212ENST00000596549 ZNF333Q96JL9 665 aa15.84■□□□□ 0.13
LIG1-212ENST00000596549 HAUS7Q99871 368 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms