RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 FOXP2O15409 715 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 SGSM2O43147 1006 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 CDC45O75419 566 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 HSPD1P10809 573 aaKnown RBP9.99□□□□□ -0.81
VRK3-211ENST00000596445 TDO2P48775 406 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 PLCD1P51178 756 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 HUNKP57058 714 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 SLC4A8Q2Y0W8 1093 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 SBK1Q52WX2 424 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 LDLRAD1Q5T700 205 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 C12orf60Q5U649 245 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 CTR9Q6PD62 1173 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 CASC1Q6TDU7 716 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 MOB2Q70IA6 237 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 KLRG1Q96E93 195 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.99□□□□□ -0.81
VRK3-211ENST00000596445 EPB41L4AQ9HCS5 686 aaPredicted RBP9.99□□□□□ -0.81
VRK3-211ENST00000596445 ARPP21Q9UBL0 812 aaPredicted RBP9.99□□□□□ -0.81
VRK3-211ENST00000596445 SERPINB13Q9UIV8 391 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 ZNF112Q9UJU3 913 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 TAOK2Q9UL54 1235 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 ABT1Q9ULW3 272 aaKnown RBP9.99□□□□□ -0.81
VRK3-211ENST00000596445 FZD1Q9UP38 647 aa9.99□□□□□ -0.81
VRK3-211ENST00000596445 CYP2D7A0A087X1C5 515 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 RASSF10A6NK89 507 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 PHF20L1A8MW92 1017 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 FGAP02671 866 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 CYP2D6P10635 497 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 MAP3K9P80192 1104 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 GABPAQ06546 454 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 ANKRD13AQ8IZ07 590 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 CRACR2BQ8N4Y2 399 aaPredicted RBP9.98□□□□□ -0.81
VRK3-211ENST00000596445 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.98□□□□□ -0.81
VRK3-211ENST00000596445 HHIPL1Q96JK4 782 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 WRNIP1Q96S55 665 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 ESYT1Q9BSJ8 1104 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 DSCC1Q9BVC3 393 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 TRIM34Q9BYJ4 488 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 NAPBQ9H115 298 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 IL25Q9H293 177 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 ZMYM6O95789 1325 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 ATAD5Q96QE3 1844 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 DOCK1Q14185 1865 aa9.98□□□□□ -0.81
VRK3-211ENST00000596445 FAM196BA6NMK8 535 aa9.97□□□□□ -0.81
VRK3-211ENST00000596445 MINDY4BA8MYZ0 360 aa9.97□□□□□ -0.81
VRK3-211ENST00000596445 CTNND1O60716 968 aaKnown RBP9.97□□□□□ -0.81
VRK3-211ENST00000596445 SLURP2P0DP57 97 aa9.97□□□□□ -0.81
VRK3-211ENST00000596445 DEFB115Q30KQ5 88 aa9.97□□□□□ -0.81
VRK3-211ENST00000596445 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.97□□□□□ -0.81
VRK3-211ENST00000596445 DNAJC18Q9H819 358 aa9.97□□□□□ -0.81
VRK3-211ENST00000596445 SWAP70Q9UH65 585 aa9.97□□□□□ -0.81
VRK3-211ENST00000596445 CSADQ9Y600 493 aa9.97□□□□□ -0.81
VRK3-211ENST00000596445 LAMA4Q16363 1823 aa9.97□□□□□ -0.81
VRK3-211ENST00000596445 INPP5BP32019 993 aa9.96□□□□□ -0.82
VRK3-211ENST00000596445 ZNF157P51786 506 aaPredicted RBP9.96□□□□□ -0.82
VRK3-211ENST00000596445 HTRA3P83110 453 aa9.96□□□□□ -0.82
VRK3-211ENST00000596445 EVX2Q03828 476 aa9.96□□□□□ -0.82
VRK3-211ENST00000596445 PPARAQ07869 468 aa9.96□□□□□ -0.82
VRK3-211ENST00000596445 VGLL4Q14135 290 aa9.96□□□□□ -0.82
VRK3-211ENST00000596445 NOL9Q5SY16 702 aaKnown RBP9.96□□□□□ -0.82
VRK3-211ENST00000596445 RGMBQ6NW40 437 aa9.96□□□□□ -0.82
VRK3-211ENST00000596445 TATDN1Q6P1N9 297 aa9.96□□□□□ -0.82
VRK3-211ENST00000596445 KIAA1211Q6ZU35 1233 aa9.96□□□□□ -0.82
VRK3-211ENST00000596445 C16orf86Q6ZW13 317 aa9.96□□□□□ -0.82
VRK3-211ENST00000596445 ZKSCAN4Q969J2 545 aaPredicted RBP9.96□□□□□ -0.82
VRK3-211ENST00000596445 SLC10A4Q96EP9 437 aa9.96□□□□□ -0.82
VRK3-211ENST00000596445 DYNLL2Q96FJ2 89 aa9.96□□□□□ -0.82
VRK3-211ENST00000596445 CLMNQ96JQ2 1002 aa9.96□□□□□ -0.82
VRK3-211ENST00000596445 CTNNA3Q9UI47 895 aa9.96□□□□□ -0.82
VRK3-211ENST00000596445 ROBO3Q96MS0 1386 aa9.96□□□□□ -0.82
VRK3-211ENST00000596445 SMIM22K7EJ46 135 aa9.95□□□□□ -0.82
VRK3-211ENST00000596445 SLC3A2P08195 630 aaKnown RBP9.95□□□□□ -0.82
VRK3-211ENST00000596445 SHMT1P34896 483 aa9.95□□□□□ -0.82
VRK3-211ENST00000596445 CAP2P40123 477 aa9.95□□□□□ -0.82
VRK3-211ENST00000596445 CDK8P49336 464 aa9.95□□□□□ -0.82
VRK3-211ENST00000596445 PTH1RQ03431 593 aa9.95□□□□□ -0.82
VRK3-211ENST00000596445 RRP1BQ14684 758 aaKnown RBP9.95□□□□□ -0.82
VRK3-211ENST00000596445 CERKLQ49MI3 558 aaPredicted RBP9.95□□□□□ -0.82
VRK3-211ENST00000596445 CCDC102AQ96A19 550 aa9.95□□□□□ -0.82
VRK3-211ENST00000596445 ZNF287Q9HBT7 754 aa9.95□□□□□ -0.82
VRK3-211ENST00000596445 PICK1Q9NRD5 415 aa9.95□□□□□ -0.82
VRK3-211ENST00000596445 ANAPC4Q9UJX5 808 aa9.95□□□□□ -0.82
VRK3-211ENST00000596445 SNCAIPQ9Y6H5 919 aa9.95□□□□□ -0.82
VRK3-211ENST00000596445 PHIPQ8WWQ0 1821 aa9.94□□□□□ -0.82
VRK3-211ENST00000596445 FAM155AB1AL88 458 aaPredicted RBP9.94□□□□□ -0.82
VRK3-211ENST00000596445 ASNSP08243 561 aa9.94□□□□□ -0.82
VRK3-211ENST00000596445 ECE1P42892 770 aa9.94□□□□□ -0.82
VRK3-211ENST00000596445 PDE4BQ07343 736 aa9.94□□□□□ -0.82
VRK3-211ENST00000596445 PAXIP1Q6ZW49 1069 aaPredicted RBP9.94□□□□□ -0.82
VRK3-211ENST00000596445 ERO1BQ86YB8 467 aa9.94□□□□□ -0.82
VRK3-211ENST00000596445 RASAL3Q86YV0 1011 aa9.94□□□□□ -0.82
VRK3-211ENST00000596445 SCYL3Q8IZE3 742 aa9.94□□□□□ -0.82
VRK3-211ENST00000596445 SLC44A5Q8NCS7 719 aa9.94□□□□□ -0.82
VRK3-211ENST00000596445 MAP4K1Q92918 833 aa9.94□□□□□ -0.82
VRK3-211ENST00000596445 CAPNS2Q96L46 248 aa9.94□□□□□ -0.82
VRK3-211ENST00000596445 CCDC17Q96LX7 622 aa9.94□□□□□ -0.82
VRK3-211ENST00000596445 LSG1Q9H089 658 aaKnown RBP9.94□□□□□ -0.82
VRK3-211ENST00000596445 ELP3Q9H9T3 547 aa9.94□□□□□ -0.82
VRK3-211ENST00000596445 GINM1Q9NU53 330 aa9.94□□□□□ -0.82
VRK3-211ENST00000596445 U3KPZ7 1027 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms