RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 OS9Q13438 667 aaPredicted RBP19.56■□□□□ 0.72
USHBP1-206ENST00000596436 SPTY2D1Q68D10 685 aaPredicted RBP19.56■□□□□ 0.72
USHBP1-206ENST00000596436 XAGE2Q96GT9 111 aa19.56■□□□□ 0.72
USHBP1-206ENST00000596436 UBXN2AP68543 259 aa19.55■□□□□ 0.72
USHBP1-206ENST00000596436 MECOMQ03112 1051 aa19.55■□□□□ 0.72
USHBP1-206ENST00000596436 IRF5Q13568 498 aa19.55■□□□□ 0.72
USHBP1-206ENST00000596436 PXYLP1Q8TE99 480 aa19.55■□□□□ 0.72
USHBP1-206ENST00000596436 PRO3102Q9H379 93 aa19.55■□□□□ 0.72
USHBP1-206ENST00000596436 ABCF2Q9UG63 623 aa19.55■□□□□ 0.72
USHBP1-206ENST00000596436 AKAP2Q9Y2D5 859 aa19.55■□□□□ 0.72
USHBP1-206ENST00000596436 MAP4K4O95819 1239 aaPredicted RBP19.54■□□□□ 0.72
USHBP1-206ENST00000596436 ZSCAN29Q8IWY8 852 aaPredicted RBP19.54■□□□□ 0.72
USHBP1-206ENST00000596436 RNF208Q9H0X6 261 aa19.54■□□□□ 0.72
USHBP1-206ENST00000596436 AGTPBP1Q9UPW5 1226 aa19.54■□□□□ 0.72
USHBP1-206ENST00000596436 SUPT16HQ9Y5B9 1047 aaKnown RBP19.54■□□□□ 0.72
USHBP1-206ENST00000596436 ATAD5Q96QE3 1844 aa19.53■□□□□ 0.72
USHBP1-206ENST00000596436 CAPN2P17655 700 aa19.53■□□□□ 0.72
USHBP1-206ENST00000596436 TNNI3KQ59H18 835 aa19.53■□□□□ 0.72
USHBP1-206ENST00000596436 GADL1Q6ZQY3 521 aa19.53■□□□□ 0.72
USHBP1-206ENST00000596436 U2AF1L4Q8WU68 220 aaKnown RBP19.53■□□□□ 0.72
USHBP1-206ENST00000596436 UNC93B1Q9H1C4 597 aa19.53■□□□□ 0.72
USHBP1-206ENST00000596436 HMG20BQ9P0W2 317 aa19.53■□□□□ 0.72
USHBP1-206ENST00000596436 FPGT-TNNI3KV9GXZ4 949 aa19.53■□□□□ 0.72
USHBP1-206ENST00000596436 ADCY3O60266 1144 aa19.52■□□□□ 0.72
USHBP1-206ENST00000596436 HMMRO75330 724 aa19.52■□□□□ 0.72
USHBP1-206ENST00000596436 FLT3LGP49771 235 aa19.52■□□□□ 0.72
USHBP1-206ENST00000596436 PICALMQ13492 652 aa19.52■□□□□ 0.72
USHBP1-206ENST00000596436 ERICH6Q7L0X2 663 aa19.52■□□□□ 0.72
USHBP1-206ENST00000596436 NSUN4Q96CB9 384 aaKnown RBP19.52■□□□□ 0.72
USHBP1-206ENST00000596436 NEUROD6Q96NK8 337 aa19.52■□□□□ 0.72
USHBP1-206ENST00000596436 HTATIP2Q9BUP3 242 aa19.52■□□□□ 0.72
USHBP1-206ENST00000596436 GPR108Q9NPR9 543 aa19.52■□□□□ 0.72
USHBP1-206ENST00000596436 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.52■□□□□ 0.72
USHBP1-206ENST00000596436 SIPA1L1O43166 1804 aa19.51■□□□□ 0.71
USHBP1-206ENST00000596436 TRIM75PA6NK02 468 aa19.51■□□□□ 0.71
USHBP1-206ENST00000596436 SGPL1O95470 568 aa19.51■□□□□ 0.71
USHBP1-206ENST00000596436 ARID4AP29374 1257 aaPredicted RBP19.51■□□□□ 0.71
USHBP1-206ENST00000596436 CHRDL2Q6WN34 429 aa19.51■□□□□ 0.71
USHBP1-206ENST00000596436 PROCA1Q8NCQ7 364 aaPredicted RBP19.51■□□□□ 0.71
USHBP1-206ENST00000596436 OSBPL5Q9H0X9 879 aaPredicted RBP19.51■□□□□ 0.71
USHBP1-206ENST00000596436 PAK6Q9NQU5 681 aaPredicted RBP19.51■□□□□ 0.71
USHBP1-206ENST00000596436 PCDHB15Q9Y5E8 787 aa19.51■□□□□ 0.71
USHBP1-206ENST00000596436 FAM110CQ1W6H9 321 aa19.5■□□□□ 0.71
USHBP1-206ENST00000596436 TREML2Q5T2D2 321 aa19.5■□□□□ 0.71
USHBP1-206ENST00000596436 CCDC84Q86UT8 332 aaPredicted RBP19.5■□□□□ 0.71
USHBP1-206ENST00000596436 SPATA5Q8NB90 893 aa19.5■□□□□ 0.71
USHBP1-206ENST00000596436 DPF3Q92784 378 aa19.5■□□□□ 0.71
USHBP1-206ENST00000596436 DBNDD2Q9BQY9 259 aa19.5■□□□□ 0.71
USHBP1-206ENST00000596436 TLR7Q9NYK1 1049 aaKnown RBP19.5■□□□□ 0.71
USHBP1-206ENST00000596436 RBM27Q9P2N5 1060 aaKnown RBP19.5■□□□□ 0.71
USHBP1-206ENST00000596436 BIN2Q9UBW5 565 aaPredicted RBP19.5■□□□□ 0.71
USHBP1-206ENST00000596436 MAST2Q6P0Q8 1798 aa19.49■□□□□ 0.71
USHBP1-206ENST00000596436 DOCK3Q8IZD9 2030 aa19.49■□□□□ 0.71
USHBP1-206ENST00000596436 APBB1O00213 710 aa19.49■□□□□ 0.71
USHBP1-206ENST00000596436 TNPO2O14787 897 aaKnown RBP19.49■□□□□ 0.71
USHBP1-206ENST00000596436 FARP2O94887 1054 aaPredicted RBP19.49■□□□□ 0.71
USHBP1-206ENST00000596436 INHAP05111 366 aa19.49■□□□□ 0.71
USHBP1-206ENST00000596436 ELNP15502 786 aa19.49■□□□□ 0.71
USHBP1-206ENST00000596436 GSTO1P78417 241 aa19.49■□□□□ 0.71
USHBP1-206ENST00000596436 PI16Q6UXB8 463 aa19.49■□□□□ 0.71
USHBP1-206ENST00000596436 ERC1Q8IUD2 1116 aa19.49■□□□□ 0.71
USHBP1-206ENST00000596436 SMCR8Q8TEV9 937 aaPredicted RBP19.49■□□□□ 0.71
USHBP1-206ENST00000596436 EAF2Q96CJ1 260 aaPredicted RBP19.49■□□□□ 0.71
USHBP1-206ENST00000596436 TBC1D2Q9BYX2 928 aa19.49■□□□□ 0.71
USHBP1-206ENST00000596436 CRISPLD2Q9H0B8 497 aa19.49■□□□□ 0.71
USHBP1-206ENST00000596436 FAM196BA6NMK8 535 aa19.48■□□□□ 0.71
USHBP1-206ENST00000596436 LDHCP07864 332 aa19.48■□□□□ 0.71
USHBP1-206ENST00000596436 RRP1BQ14684 758 aaKnown RBP19.48■□□□□ 0.71
USHBP1-206ENST00000596436 RHPN1Q8TCX5 695 aa19.48■□□□□ 0.71
USHBP1-206ENST00000596436 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.48■□□□□ 0.71
USHBP1-206ENST00000596436 IL1RAPL2Q9NP60 686 aa19.48■□□□□ 0.71
USHBP1-206ENST00000596436 DBNLQ9UJU6 430 aaKnown RBP19.48■□□□□ 0.71
USHBP1-206ENST00000596436 PNMA3Q9UL41 463 aa19.48■□□□□ 0.71
USHBP1-206ENST00000596436 FOCADQ5VW36 1801 aa19.48■□□□□ 0.71
USHBP1-206ENST00000596436 LAMA3Q16787 3333 aa19.48■□□□□ 0.71
USHBP1-206ENST00000596436 CAP2P40123 477 aa19.47■□□□□ 0.71
USHBP1-206ENST00000596436 HSP90AB4PQ58FF6 505 aa19.47■□□□□ 0.71
USHBP1-206ENST00000596436 SH3D19Q5HYK7 790 aa19.47■□□□□ 0.71
USHBP1-206ENST00000596436 TBC1D9Q6ZT07 1266 aa19.47■□□□□ 0.71
USHBP1-206ENST00000596436 ANKRD13CQ8N6S4 541 aa19.47■□□□□ 0.71
USHBP1-206ENST00000596436 ZNF280CQ8ND82 737 aa19.47■□□□□ 0.71
USHBP1-206ENST00000596436 CCDC8Q9H0W5 538 aaPredicted RBP19.47■□□□□ 0.71
USHBP1-206ENST00000596436 CDK5RAP2Q96SN8 1893 aa19.47■□□□□ 0.71
USHBP1-206ENST00000596436 PLXNB2O15031 1838 aa19.46■□□□□ 0.71
USHBP1-206ENST00000596436 MCAMP43121 646 aa19.46■□□□□ 0.71
USHBP1-206ENST00000596436 GCLCP48506 637 aaPredicted RBP19.46■□□□□ 0.71
USHBP1-206ENST00000596436 SPP2Q13103 211 aa19.46■□□□□ 0.71
USHBP1-206ENST00000596436 GORABQ5T7V8 394 aa19.46■□□□□ 0.71
USHBP1-206ENST00000596436 HERC5Q9UII4 1024 aaKnown RBP19.46■□□□□ 0.71
USHBP1-206ENST00000596436 NR2E3Q9Y5X4 410 aa19.46■□□□□ 0.71
USHBP1-206ENST00000596436 ALPK3Q96L96 1907 aa19.46■□□□□ 0.71
USHBP1-206ENST00000596436 METTL16Q86W50 562 aaKnown RBP19.45■□□□□ 0.7
USHBP1-206ENST00000596436 EXOC6Q8TAG9 804 aa19.45■□□□□ 0.7
USHBP1-206ENST00000596436 COA7Q96BR5 231 aa19.45■□□□□ 0.7
USHBP1-206ENST00000596436 KIF1BPQ96EK5 621 aa19.45■□□□□ 0.7
USHBP1-206ENST00000596436 DEFB118Q96PH6 123 aa19.45■□□□□ 0.7
USHBP1-206ENST00000596436 USP17L5A8MUK1 530 aa19.44■□□□□ 0.7
USHBP1-206ENST00000596436 RAB11FIP3O75154 756 aa19.44■□□□□ 0.7
USHBP1-206ENST00000596436 UQCRFS1P1P0C7P4 283 aa19.44■□□□□ 0.7
USHBP1-206ENST00000596436 AACSQ86V21 672 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms