RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 DYNLL1P63167 89 aaKnown RBP20.84■□□□□ 0.93
CCDC9-202ENST00000595659 SPP2Q13103 211 aa20.84■□□□□ 0.93
CCDC9-202ENST00000595659 ZNF512BQ96KM6 892 aaPredicted RBP20.84■□□□□ 0.93
CCDC9-202ENST00000595659 SRRDQ9UH36 339 aa20.84■□□□□ 0.93
CCDC9-202ENST00000595659 CENPFP49454 3210 aa20.84■□□□□ 0.93
CCDC9-202ENST00000595659 APBB1O00213 710 aa20.83■□□□□ 0.93
CCDC9-202ENST00000595659 IDH1O75874 414 aaKnown RBP20.83■□□□□ 0.93
CCDC9-202ENST00000595659 GNRH1P01148 92 aa20.83■□□□□ 0.93
CCDC9-202ENST00000595659 CYP7A1P22680 504 aa20.83■□□□□ 0.93
CCDC9-202ENST00000595659 PPP4CP60510 307 aa20.83■□□□□ 0.93
CCDC9-202ENST00000595659 TREML2Q5T2D2 321 aa20.83■□□□□ 0.93
CCDC9-202ENST00000595659 AACSQ86V21 672 aa20.83■□□□□ 0.93
CCDC9-202ENST00000595659 IL1RAPL2Q9NP60 686 aa20.83■□□□□ 0.93
CCDC9-202ENST00000595659 SAP30BPQ9UHR5 308 aaKnown RBP20.83■□□□□ 0.93
CCDC9-202ENST00000595659 ZSWIM8A7E2V4 1837 aa20.83■□□□□ 0.92
CCDC9-202ENST00000595659 PLCG2P16885 1265 aa20.82■□□□□ 0.92
CCDC9-202ENST00000595659 CAP2P40123 477 aa20.82■□□□□ 0.92
CCDC9-202ENST00000595659 MIGA1Q8NAN2 632 aa20.82■□□□□ 0.92
CCDC9-202ENST00000595659 RAET1EQ8TD07 263 aa20.82■□□□□ 0.92
CCDC9-202ENST00000595659 ANTXR1Q9H6X2 564 aa20.82■□□□□ 0.92
CCDC9-202ENST00000595659 PI4KBQ9UBF8 816 aa20.82■□□□□ 0.92
CCDC9-202ENST00000595659 PALD1Q9ULE6 856 aa20.82■□□□□ 0.92
CCDC9-202ENST00000595659 COG6Q9Y2V7 657 aa20.82■□□□□ 0.92
CCDC9-202ENST00000595659 FLT1P17948 1338 aa20.81■□□□□ 0.92
CCDC9-202ENST00000595659 MYPNQ86TC9 1320 aa20.81■□□□□ 0.92
CCDC9-202ENST00000595659 HOXD10P28358 340 aa20.81■□□□□ 0.92
CCDC9-202ENST00000595659 PRMT2P55345 433 aa20.81■□□□□ 0.92
CCDC9-202ENST00000595659 FCGRTP55899 365 aa20.81■□□□□ 0.92
CCDC9-202ENST00000595659 PRKCZQ05513 592 aa20.81■□□□□ 0.92
CCDC9-202ENST00000595659 MTFR1Q15390 333 aa20.81■□□□□ 0.92
CCDC9-202ENST00000595659 SHROOM1Q2M3G4 852 aaPredicted RBP20.81■□□□□ 0.92
CCDC9-202ENST00000595659 ZNF280CQ8ND82 737 aa20.81■□□□□ 0.92
CCDC9-202ENST00000595659 SMCR8Q8TEV9 937 aaPredicted RBP20.81■□□□□ 0.92
CCDC9-202ENST00000595659 AGTPBP1Q9UPW5 1226 aa20.81■□□□□ 0.92
CCDC9-202ENST00000595659 DOCK2Q92608 1830 aa20.81■□□□□ 0.92
CCDC9-202ENST00000595659 HMGCS2P54868 508 aa20.8■□□□□ 0.92
CCDC9-202ENST00000595659 JAG1P78504 1218 aa20.8■□□□□ 0.92
CCDC9-202ENST00000595659 MAGEB6Q8N7X4 407 aa20.8■□□□□ 0.92
CCDC9-202ENST00000595659 DHX36Q9H2U1 1008 aaKnown RBP20.8■□□□□ 0.92
CCDC9-202ENST00000595659 HERC5Q9UII4 1024 aaKnown RBP20.8■□□□□ 0.92
CCDC9-202ENST00000595659 GABRQQ9UN88 632 aa20.8■□□□□ 0.92
CCDC9-202ENST00000595659 USP17L5A8MUK1 530 aa20.79■□□□□ 0.92
CCDC9-202ENST00000595659 SLC34A2O95436 690 aa20.79■□□□□ 0.92
CCDC9-202ENST00000595659 ERC1Q8IUD2 1116 aa20.79■□□□□ 0.92
CCDC9-202ENST00000595659 CRACR2BQ8N4Y2 399 aaPredicted RBP20.79■□□□□ 0.92
CCDC9-202ENST00000595659 ANKRD13CQ8N6S4 541 aa20.79■□□□□ 0.92
CCDC9-202ENST00000595659 DNAJC18Q9H819 358 aa20.79■□□□□ 0.92
CCDC9-202ENST00000595659 BIN2Q9UBW5 565 aaPredicted RBP20.79■□□□□ 0.92
CCDC9-202ENST00000595659 SLC45A1Q9Y2W3 748 aa20.79■□□□□ 0.92
CCDC9-202ENST00000595659 COL2A1P02458 1487 aaPredicted RBP20.79■□□□□ 0.92
CCDC9-202ENST00000595659 GDF11O95390 407 aa20.78■□□□□ 0.92
CCDC9-202ENST00000595659 GRK4P32298 578 aa20.78■□□□□ 0.92
CCDC9-202ENST00000595659 RHPN1Q8TCX5 695 aa20.78■□□□□ 0.92
CCDC9-202ENST00000595659 TRIM34Q9BYJ4 488 aa20.78■□□□□ 0.92
CCDC9-202ENST00000595659 MS4A1P11836 297 aa20.77■□□□□ 0.92
CCDC9-202ENST00000595659 SIRT2Q8IXJ6 389 aa20.77■□□□□ 0.92
CCDC9-202ENST00000595659 USP5P45974 858 aa20.76■□□□□ 0.91
CCDC9-202ENST00000595659 HSP90AB4PQ58FF6 505 aa20.76■□□□□ 0.91
CCDC9-202ENST00000595659 FOXP4Q8IVH2 680 aaPredicted RBP20.76■□□□□ 0.91
CCDC9-202ENST00000595659 PROCA1Q8NCQ7 364 aaPredicted RBP20.76■□□□□ 0.91
CCDC9-202ENST00000595659 ZBTB40Q9NUA8 1239 aa20.76■□□□□ 0.91
CCDC9-202ENST00000595659 MKI67P46013 3256 aaKnown RBP20.76■□□□□ 0.91
CCDC9-202ENST00000595659 TNPO2O14787 897 aaKnown RBP20.75■□□□□ 0.91
CCDC9-202ENST00000595659 MAP3K12Q12852 859 aa20.75■□□□□ 0.91
CCDC9-202ENST00000595659 MTMR2Q13614 643 aa20.75■□□□□ 0.91
CCDC9-202ENST00000595659 AS3MTQ9HBK9 375 aa20.75■□□□□ 0.91
CCDC9-202ENST00000595659 RCAN3Q9UKA8 241 aa20.75■□□□□ 0.91
CCDC9-202ENST00000595659 PNMA3Q9UL41 463 aa20.75■□□□□ 0.91
CCDC9-202ENST00000595659 TAOK2Q9UL54 1235 aa20.75■□□□□ 0.91
CCDC9-202ENST00000595659 DDX19BQ9UMR2 479 aa20.75■□□□□ 0.91
CCDC9-202ENST00000595659 BRCA2P51587 3418 aa20.75■□□□□ 0.91
CCDC9-202ENST00000595659 HLA-DOAP06340 250 aa20.74■□□□□ 0.91
CCDC9-202ENST00000595659 ELNP15502 786 aa20.74■□□□□ 0.91
CCDC9-202ENST00000595659 FLT3LGP49771 235 aa20.74■□□□□ 0.91
CCDC9-202ENST00000595659 METTL16Q86W50 562 aaKnown RBP20.74■□□□□ 0.91
CCDC9-202ENST00000595659 RPAP2Q8IXW5 612 aaPredicted RBP20.74■□□□□ 0.91
CCDC9-202ENST00000595659 ASCC2Q9H1I8 757 aaPredicted RBP20.74■□□□□ 0.91
CCDC9-202ENST00000595659 ASNSP08243 561 aa20.73■□□□□ 0.91
CCDC9-202ENST00000595659 CCL5P13501 91 aa20.73■□□□□ 0.91
CCDC9-202ENST00000595659 C20orf194Q5TEA3 1177 aa20.73■□□□□ 0.91
CCDC9-202ENST00000595659 CLASRPQ8N2M8 674 aaKnown RBP20.73■□□□□ 0.91
CCDC9-202ENST00000595659 DNAJC2Q99543 621 aaKnown RBP20.73■□□□□ 0.91
CCDC9-202ENST00000595659 WDR18Q9BV38 432 aa20.73■□□□□ 0.91
CCDC9-202ENST00000595659 TBC1D2Q9BYX2 928 aa20.73■□□□□ 0.91
CCDC9-202ENST00000595659 DOCK1Q14185 1865 aa20.73■□□□□ 0.91
CCDC9-202ENST00000595659 ADCY3O60266 1144 aa20.72■□□□□ 0.91
CCDC9-202ENST00000595659 PEX10O60683 326 aa20.72■□□□□ 0.91
CCDC9-202ENST00000595659 IGSF3O75054 1194 aa20.72■□□□□ 0.91
CCDC9-202ENST00000595659 HMMRO75330 724 aa20.72■□□□□ 0.91
CCDC9-202ENST00000595659 IFIT2P09913 472 aaKnown RBP20.72■□□□□ 0.91
CCDC9-202ENST00000595659 BACE1P56817 501 aa20.72■□□□□ 0.91
CCDC9-202ENST00000595659 PABPC4Q13310 644 aaKnown RBP eCLIP20.72■□□□□ 0.91
CCDC9-202ENST00000595659 SH3D19Q5HYK7 790 aa20.72■□□□□ 0.91
CCDC9-202ENST00000595659 KIF1BPQ96EK5 621 aa20.72■□□□□ 0.91
CCDC9-202ENST00000595659 RNF208Q9H0X6 261 aa20.72■□□□□ 0.91
CCDC9-202ENST00000595659 ZBTB21Q9ULJ3 1066 aa20.72■□□□□ 0.91
CCDC9-202ENST00000595659 PDE4DIPQ5VU43 2346 aa20.72■□□□□ 0.91
CCDC9-202ENST00000595659 GOLIM4O00461 696 aa20.71■□□□□ 0.91
CCDC9-202ENST00000595659 UBXN2AP68543 259 aa20.71■□□□□ 0.91
CCDC9-202ENST00000595659 FAM110CQ1W6H9 321 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms