RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 LRRFIP2Q9Y608 721 aaKnown RBP12.12□□□□□ -0.47
NOTCH3-202ENST00000595045 DOCK1Q14185 1865 aa12.11□□□□□ -0.47
NOTCH3-202ENST00000595045 SEMA3EO15041 775 aa12.11□□□□□ -0.47
NOTCH3-202ENST00000595045 ENTPD3O75355 529 aa12.11□□□□□ -0.47
NOTCH3-202ENST00000595045 HMGCRP04035 888 aa12.11□□□□□ -0.47
NOTCH3-202ENST00000595045 TIMM10P62072 90 aa12.11□□□□□ -0.47
NOTCH3-202ENST00000595045 RRP1BQ14684 758 aaKnown RBP12.11□□□□□ -0.47
NOTCH3-202ENST00000595045 CCDC84Q86UT8 332 aaPredicted RBP12.11□□□□□ -0.47
NOTCH3-202ENST00000595045 MEIS3Q99687 375 aa12.11□□□□□ -0.47
NOTCH3-202ENST00000595045 UBE2OQ9C0C9 1292 aaKnown RBP12.11□□□□□ -0.47
NOTCH3-202ENST00000595045 C11orf49Q9H6J7 331 aa12.11□□□□□ -0.47
NOTCH3-202ENST00000595045 DENND2AQ9ULE3 1009 aa12.11□□□□□ -0.47
NOTCH3-202ENST00000595045 UBTFL1P0CB47 393 aaPredicted RBP12.1□□□□□ -0.47
NOTCH3-202ENST00000595045 IL15P40933 162 aaPredicted RBP12.1□□□□□ -0.47
NOTCH3-202ENST00000595045 TRIM32Q13049 653 aa12.1□□□□□ -0.47
NOTCH3-202ENST00000595045 FAM110CQ1W6H9 321 aa12.1□□□□□ -0.47
NOTCH3-202ENST00000595045 SMC4Q9NTJ3 1288 aa12.1□□□□□ -0.47
NOTCH3-202ENST00000595045 AGTPBP1Q9UPW5 1226 aa12.1□□□□□ -0.47
NOTCH3-202ENST00000595045 PDS5AQ29RF7 1337 aaKnown RBP12.1□□□□□ -0.47
NOTCH3-202ENST00000595045 RPTORQ8N122 1335 aa12.1□□□□□ -0.47
NOTCH3-202ENST00000595045 MYH2Q9UKX2 1941 aa12.09□□□□□ -0.47
NOTCH3-202ENST00000595045 GPR75-ASB3A0A0A6YYF3 556 aa12.09□□□□□ -0.47
NOTCH3-202ENST00000595045 TRIM75PA6NK02 468 aa12.09□□□□□ -0.47
NOTCH3-202ENST00000595045 TREML2Q5T2D2 321 aa12.09□□□□□ -0.47
NOTCH3-202ENST00000595045 GUCD1Q96NT3 240 aa12.09□□□□□ -0.47
NOTCH3-202ENST00000595045 HMX1Q9NP08 348 aaPredicted RBP12.09□□□□□ -0.47
NOTCH3-202ENST00000595045 GJD2Q9UKL4 321 aa12.09□□□□□ -0.47
NOTCH3-202ENST00000595045 OGDHLQ9ULD0 1010 aa12.09□□□□□ -0.47
NOTCH3-202ENST00000595045 PLXNB2O15031 1838 aa12.09□□□□□ -0.47
NOTCH3-202ENST00000595045 PFASO15067 1338 aa12.09□□□□□ -0.47
NOTCH3-202ENST00000595045 POTEB2H3BUK9 544 aa12.08□□□□□ -0.48
NOTCH3-202ENST00000595045 CTNND1O60716 968 aaKnown RBP12.08□□□□□ -0.48
NOTCH3-202ENST00000595045 BTDP43251 543 aa12.08□□□□□ -0.48
NOTCH3-202ENST00000595045 MECOMQ03112 1051 aa12.08□□□□□ -0.48
NOTCH3-202ENST00000595045 MTX1Q13505 466 aa12.08□□□□□ -0.48
NOTCH3-202ENST00000595045 PI16Q6UXB8 463 aa12.08□□□□□ -0.48
NOTCH3-202ENST00000595045 XAGE2Q96GT9 111 aa12.08□□□□□ -0.48
NOTCH3-202ENST00000595045 GNL3LQ9NVN8 582 aaKnown RBP12.08□□□□□ -0.48
NOTCH3-202ENST00000595045 NCOR1O75376 2440 aa12.08□□□□□ -0.48
NOTCH3-202ENST00000595045 A0A1B0GUL7 405 aa12.07□□□□□ -0.48
NOTCH3-202ENST00000595045 FAM196BA6NMK8 535 aa12.07□□□□□ -0.48
NOTCH3-202ENST00000595045 TBC1D12O60347 775 aa12.07□□□□□ -0.48
NOTCH3-202ENST00000595045 NPM3O75607 178 aaKnown RBP12.07□□□□□ -0.48
NOTCH3-202ENST00000595045 RARSP54136 660 aaKnown RBP12.07□□□□□ -0.48
NOTCH3-202ENST00000595045 JAG1P78504 1218 aa12.07□□□□□ -0.48
NOTCH3-202ENST00000595045 TFCP2Q12800 502 aa12.07□□□□□ -0.48
NOTCH3-202ENST00000595045 FAM109BQ6ICB4 259 aaPredicted RBP12.07□□□□□ -0.48
NOTCH3-202ENST00000595045 HMG20BQ9P0W2 317 aa12.07□□□□□ -0.48
NOTCH3-202ENST00000595045 PNMA3Q9UL41 463 aa12.07□□□□□ -0.48
NOTCH3-202ENST00000595045 TNNQ9UQP3 1299 aa12.07□□□□□ -0.48
NOTCH3-202ENST00000595045 LOC285556D6RIA3 1793 aa12.07□□□□□ -0.48
NOTCH3-202ENST00000595045 COL2A1P02458 1487 aaPredicted RBP12.07□□□□□ -0.48
NOTCH3-202ENST00000595045 GCLCP48506 637 aaPredicted RBP12.06□□□□□ -0.48
NOTCH3-202ENST00000595045 MDM2Q00987 491 aaPredicted RBP12.06□□□□□ -0.48
NOTCH3-202ENST00000595045 MAP3K21Q5TCX8 1036 aa12.06□□□□□ -0.48
NOTCH3-202ENST00000595045 POTEEQ6S8J3 1075 aa12.06□□□□□ -0.48
NOTCH3-202ENST00000595045 TBC1D9Q6ZT07 1266 aa12.06□□□□□ -0.48
NOTCH3-202ENST00000595045 ZSCAN29Q8IWY8 852 aaPredicted RBP12.06□□□□□ -0.48
NOTCH3-202ENST00000595045 PROCA1Q8NCQ7 364 aaPredicted RBP12.06□□□□□ -0.48
NOTCH3-202ENST00000595045 TRIB2Q92519 343 aa12.06□□□□□ -0.48
NOTCH3-202ENST00000595045 NSUN4Q96CB9 384 aaKnown RBP12.06□□□□□ -0.48
NOTCH3-202ENST00000595045 FAM161BQ96MY7 647 aa12.06□□□□□ -0.48
NOTCH3-202ENST00000595045 MROH7-TTC4A0A0A0MT08 1334 aa12.06□□□□□ -0.48
NOTCH3-202ENST00000595045 CT47B1P0C2W7 299 aaPredicted RBP12.05□□□□□ -0.48
NOTCH3-202ENST00000595045 COL6A1P12109 1028 aa12.05□□□□□ -0.48
NOTCH3-202ENST00000595045 PICALMQ13492 652 aa12.05□□□□□ -0.48
NOTCH3-202ENST00000595045 LRRC26Q2I0M4 334 aa12.05□□□□□ -0.48
NOTCH3-202ENST00000595045 API5Q9BZZ5 524 aaKnown RBP12.05□□□□□ -0.48
NOTCH3-202ENST00000595045 ABCF2Q9UG63 623 aa12.05□□□□□ -0.48
NOTCH3-202ENST00000595045 PRKAR2AP13861 404 aaKnown RBP12.04□□□□□ -0.48
NOTCH3-202ENST00000595045 SHROOM1Q2M3G4 852 aaPredicted RBP12.04□□□□□ -0.48
NOTCH3-202ENST00000595045 DZIP1Q86YF9 867 aaKnown RBP12.04□□□□□ -0.48
NOTCH3-202ENST00000595045 ZGPATQ8N5A5 531 aaKnown RBP12.04□□□□□ -0.48
NOTCH3-202ENST00000595045 ASCC2Q9H1I8 757 aaPredicted RBP12.04□□□□□ -0.48
NOTCH3-202ENST00000595045 PRDM6Q9NQX0 595 aa12.04□□□□□ -0.48
NOTCH3-202ENST00000595045 ATAD5Q96QE3 1844 aa12.04□□□□□ -0.48
NOTCH3-202ENST00000595045 BDP1A6H8Y1 2624 aa12.03□□□□□ -0.48
NOTCH3-202ENST00000595045 PNMA6EA0A0J9YXQ4 647 aa12.03□□□□□ -0.48
NOTCH3-202ENST00000595045 SRGAP3O43295 1099 aa12.03□□□□□ -0.48
NOTCH3-202ENST00000595045 PEX10O60683 326 aa12.03□□□□□ -0.48
NOTCH3-202ENST00000595045 CYP2B6P20813 491 aa12.03□□□□□ -0.48
NOTCH3-202ENST00000595045 ARID4AP29374 1257 aaPredicted RBP12.03□□□□□ -0.48
NOTCH3-202ENST00000595045 HMGCS2P54868 508 aa12.03□□□□□ -0.48
NOTCH3-202ENST00000595045 SPP2Q13103 211 aa12.03□□□□□ -0.48
NOTCH3-202ENST00000595045 SPATA5Q8NB90 893 aa12.03□□□□□ -0.48
NOTCH3-202ENST00000595045 ARHGAP45Q92619 1136 aa12.03□□□□□ -0.48
NOTCH3-202ENST00000595045 OSBPL5Q9H0X9 879 aaPredicted RBP12.03□□□□□ -0.48
NOTCH3-202ENST00000595045 DNAJC18Q9H819 358 aa12.03□□□□□ -0.48
NOTCH3-202ENST00000595045 MORF4L1Q9UBU8 362 aa12.03□□□□□ -0.48
NOTCH3-202ENST00000595045 CAP2P40123 477 aa12.02□□□□□ -0.49
NOTCH3-202ENST00000595045 MCAMP43121 646 aa12.02□□□□□ -0.49
NOTCH3-202ENST00000595045 PABPC4Q13310 644 aaKnown RBP eCLIP12.02□□□□□ -0.49
NOTCH3-202ENST00000595045 MVPQ14764 893 aaKnown RBP12.02□□□□□ -0.49
NOTCH3-202ENST00000595045 SH3D19Q5HYK7 790 aa12.02□□□□□ -0.49
NOTCH3-202ENST00000595045 SPTY2D1Q68D10 685 aaPredicted RBP12.02□□□□□ -0.49
NOTCH3-202ENST00000595045 LHX8Q68G74 356 aa12.02□□□□□ -0.49
NOTCH3-202ENST00000595045 ERICH6Q7L0X2 663 aa12.02□□□□□ -0.49
NOTCH3-202ENST00000595045 ADGRA1Q86SQ6 560 aa12.02□□□□□ -0.49
NOTCH3-202ENST00000595045 METTL16Q86W50 562 aaKnown RBP12.02□□□□□ -0.49
NOTCH3-202ENST00000595045 ZNF280CQ8ND82 737 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms