RNA–Protein interactions for RNA: ENST00000594461.2

LINC00347-202, long intergenic non-protein coding RNA 347, humanhuman

TSL 1 (best) BASIC

Gene LINC00347, Length 2,371 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-202ENST00000594461 NACAP1Q9BZK3 213 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 MRPL46Q9H2W6 279 aaKnown RBP8.3□□□□□ -1.08
LINC00347-202ENST00000594461 ZNF304Q9HCX3 659 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 ATXN10Q9UBB4 475 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 CARD8Q9Y2G2 431 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 DMRT2Q9Y5R5 561 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 INSRP06213 1382 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 PALM3A6NDB9 673 aaPredicted RBP8.3□□□□□ -1.08
LINC00347-202ENST00000594461 A6NHS1 94 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 TADA3O75528 432 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 TMCC1O94876 653 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 TROVE2P10155 538 aaKnown RBP eCLIP8.3□□□□□ -1.08
LINC00347-202ENST00000594461 RPL17P18621 184 aaKnown RBP8.3□□□□□ -1.08
LINC00347-202ENST00000594461 KIF11P52732 1056 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 LONRF2Q1L5Z9 754 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 SPDYCQ5MJ68 293 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 PPP1R15BQ5SWA1 713 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 MAML3Q96JK9 1138 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 NEUROD6Q96NK8 337 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 NAP1L3Q99457 506 aaPredicted RBP8.3□□□□□ -1.08
LINC00347-202ENST00000594461 CDC5LQ99459 802 aaKnown RBP8.3□□□□□ -1.08
LINC00347-202ENST00000594461 USP26Q9BXU7 913 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 CENPHQ9H3R5 247 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 PREBQ9HCU5 417 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 HOOK1Q9UJC3 728 aaKnown RBP8.3□□□□□ -1.08
LINC00347-202ENST00000594461 TMCO1Q9UM00 188 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 MAP3K5Q99683 1374 aa8.3□□□□□ -1.08
LINC00347-202ENST00000594461 SCAF11Q99590 1463 aaKnown RBP8.3□□□□□ -1.08
LINC00347-202ENST00000594461 LINC00854A0A1B0GVQ3 168 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 TARSL2A2RTX5 802 aaKnown RBP8.29□□□□□ -1.08
LINC00347-202ENST00000594461 TMEM247A6NEH6 219 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 USP27XA6NNY8 438 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 AKR1B10O60218 316 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 PDGFRBP09619 1106 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 FUT4P22083 530 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 AMPHP49418 695 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 BPHLQ86WA6 291 aaPredicted RBP8.29□□□□□ -1.08
LINC00347-202ENST00000594461 CDK5RAP3Q96JB5 506 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 TANGO6Q9C0B7 1094 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 MUC3BQ9H195 1237 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 SETD1BQ9UPS6 1966 aaKnown RBP8.29□□□□□ -1.08
LINC00347-202ENST00000594461 PABPN1LA6NDY0 278 aaKnown RBP8.29□□□□□ -1.08
LINC00347-202ENST00000594461 SPTLC2O15270 562 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 STAM2O75886 525 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 HSPA1AP0DMV8 641 aaKnown RBP8.29□□□□□ -1.08
LINC00347-202ENST00000594461 HSPA1BP0DMV9 641 aaKnown RBP8.29□□□□□ -1.08
LINC00347-202ENST00000594461 HSPA8P11142 646 aaKnown RBP8.29□□□□□ -1.08
LINC00347-202ENST00000594461 ATP4AP20648 1035 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 NUTM2DQ5VT03 806 aaPredicted RBP8.29□□□□□ -1.08
LINC00347-202ENST00000594461 HDXQ7Z353 690 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 DRC7Q8IY82 874 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 PPP1R14BQ96C90 147 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 NR1H4Q96RI1 486 aaPredicted RBP8.29□□□□□ -1.08
LINC00347-202ENST00000594461 CDCA7Q9BWT1 371 aaPredicted RBP8.29□□□□□ -1.08
LINC00347-202ENST00000594461 AASDHPPTQ9NRN7 309 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 EHBP1L1Q8N3D4 1523 aa8.29□□□□□ -1.08
LINC00347-202ENST00000594461 CCDC151A5D8V7 595 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 FAM25EA8MYX2 175 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 NDUFAB1O14561 156 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 PDHBP11177 359 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 PKP1Q13835 747 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 BLMHQ13867 455 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 INAQ16352 499 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 DDB1Q16531 1140 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 RABL6Q3YEC7 729 aaPredicted RBP8.28□□□□□ -1.08
LINC00347-202ENST00000594461 PI16Q6UXB8 463 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 B4GALNT4Q76KP1 1039 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 FAM228AQ86W67 206 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 TTC39CQ8N584 583 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 ZC3H15Q8WU90 426 aaKnown RBP8.28□□□□□ -1.08
LINC00347-202ENST00000594461 CACTINQ8WUQ7 758 aaKnown RBP8.28□□□□□ -1.08
LINC00347-202ENST00000594461 OPTNQ96CV9 577 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 PCMTD2Q9NV79 361 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 DKK3Q9UBP4 350 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 CHIC2Q9UKJ5 165 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 MAFFQ9ULX9 164 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 TROQ12816 1431 aaPredicted RBP8.28□□□□□ -1.08
LINC00347-202ENST00000594461 SHOX2O60902 331 aaPredicted RBP8.28□□□□□ -1.08
LINC00347-202ENST00000594461 B3GALNT1O75752 331 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 CCDC166P0CW27 439 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 SCG2P13521 617 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 CNGA1P29973 690 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 IFFO1Q0D2I5 559 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 CAMK2BQ13554 666 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 BRD3Q15059 726 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 SKIDA1Q1XH10 827 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 SH2D4BQ5SQS7 431 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 ZCCHC8Q6NZY4 707 aaKnown RBP8.28□□□□□ -1.08
LINC00347-202ENST00000594461 POTEEQ6S8J3 1075 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 CCAR2Q8N163 923 aaKnown RBP8.28□□□□□ -1.08
LINC00347-202ENST00000594461 THEMISQ8N1K5 641 aaPredicted RBP8.28□□□□□ -1.08
LINC00347-202ENST00000594461 MAIP1Q8WWC4 291 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 SNX27Q96L92 541 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 VCPKMTQ9H867 229 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 FAM204AQ9H8W3 233 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 AS3MTQ9HBK9 375 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 SLC40A1Q9NP59 571 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 WDR35Q9P2L0 1181 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 IP6K2Q9UHH9 426 aa8.28□□□□□ -1.08
LINC00347-202ENST00000594461 POLR1AO95602 1720 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms