RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 FASTKD5Q7L8L6 764 aaKnown RBP18.54■□□□□ 0.56
TRIM28-203ENST00000593582 OTOP1Q7RTM1 612 aa18.54■□□□□ 0.56
TRIM28-203ENST00000593582 CD99L2Q8TCZ2 262 aa18.54■□□□□ 0.56
TRIM28-203ENST00000593582 TRIM34Q9BYJ4 488 aa18.54■□□□□ 0.56
TRIM28-203ENST00000593582 AFG3L2Q9Y4W6 797 aa18.54■□□□□ 0.56
TRIM28-203ENST00000593582 A0A0G2JLL6 359 aaPredicted RBP18.53■□□□□ 0.56
TRIM28-203ENST00000593582 PDHXO00330 501 aa18.53■□□□□ 0.56
TRIM28-203ENST00000593582 HLA-DOAP06340 250 aa18.53■□□□□ 0.56
TRIM28-203ENST00000593582 USP5P45974 858 aa18.53■□□□□ 0.56
TRIM28-203ENST00000593582 ARHGEF6Q15052 776 aa18.53■□□□□ 0.56
TRIM28-203ENST00000593582 PRRT2Q7Z6L0 340 aaPredicted RBP18.53■□□□□ 0.56
TRIM28-203ENST00000593582 CRACR2BQ8N4Y2 399 aaPredicted RBP18.53■□□□□ 0.56
TRIM28-203ENST00000593582 BOLA2Q9H3K6 86 aa18.53■□□□□ 0.56
TRIM28-203ENST00000593582 DCTPP1Q9H773 170 aa18.53■□□□□ 0.56
TRIM28-203ENST00000593582 EFCC1Q9HA90 598 aa18.53■□□□□ 0.56
TRIM28-203ENST00000593582 PALD1Q9ULE6 856 aa18.53■□□□□ 0.56
TRIM28-203ENST00000593582 MYO5AQ9Y4I1 1855 aaKnown RBP18.52■□□□□ 0.56
TRIM28-203ENST00000593582 SMARCA5O60264 1052 aaPredicted RBP18.52■□□□□ 0.56
TRIM28-203ENST00000593582 PDE6AP16499 860 aa18.52■□□□□ 0.56
TRIM28-203ENST00000593582 MOGSQ13724 837 aa18.52■□□□□ 0.56
TRIM28-203ENST00000593582 FOXP4Q8IVH2 680 aaPredicted RBP18.52■□□□□ 0.56
TRIM28-203ENST00000593582 PAG1Q9NWQ8 432 aa18.52■□□□□ 0.56
TRIM28-203ENST00000593582 SAP30BPQ9UHR5 308 aaKnown RBP18.52■□□□□ 0.56
TRIM28-203ENST00000593582 HTTP42858 3142 aa18.51■□□□□ 0.55
TRIM28-203ENST00000593582 MAGEB6P1A0A0J9YX57 407 aa18.51■□□□□ 0.55
TRIM28-203ENST00000593582 TRIM75PA6NK02 468 aa18.51■□□□□ 0.55
TRIM28-203ENST00000593582 CAP2P40123 477 aa18.51■□□□□ 0.55
TRIM28-203ENST00000593582 METTL16Q86W50 562 aaKnown RBP18.51■□□□□ 0.55
TRIM28-203ENST00000593582 HAUS7Q99871 368 aa18.51■□□□□ 0.55
TRIM28-203ENST00000593582 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.51■□□□□ 0.55
TRIM28-203ENST00000593582 ZNF532Q9HCE3 1301 aa18.5■□□□□ 0.55
TRIM28-203ENST00000593582 GPAT2Q6NUI2 795 aa18.5■□□□□ 0.55
TRIM28-203ENST00000593582 GADL1Q6ZQY3 521 aa18.5■□□□□ 0.55
TRIM28-203ENST00000593582 EDC3Q96F86 508 aaKnown RBP18.5■□□□□ 0.55
TRIM28-203ENST00000593582 GPATCH3Q96I76 525 aa18.5■□□□□ 0.55
TRIM28-203ENST00000593582 PARK7Q99497 189 aaKnown RBP18.5■□□□□ 0.55
TRIM28-203ENST00000593582 RIOK1Q9BRS2 568 aaKnown RBP18.5■□□□□ 0.55
TRIM28-203ENST00000593582 TBC1D2Q9BYX2 928 aa18.5■□□□□ 0.55
TRIM28-203ENST00000593582 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.5■□□□□ 0.552e-8■■■□□ 15.6
TRIM28-203ENST00000593582 CENPFP49454 3210 aa18.49■□□□□ 0.55
TRIM28-203ENST00000593582 KIF22Q14807 665 aa18.49■□□□□ 0.55
TRIM28-203ENST00000593582 CCDC84Q86UT8 332 aaPredicted RBP18.49■□□□□ 0.55
TRIM28-203ENST00000593582 ZNF280CQ8ND82 737 aa18.49■□□□□ 0.55
TRIM28-203ENST00000593582 PCDHB15Q9Y5E8 787 aa18.49■□□□□ 0.55
TRIM28-203ENST00000593582 DOCK1Q14185 1865 aa18.49■□□□□ 0.55
TRIM28-203ENST00000593582 USP17L5A8MUK1 530 aa18.48■□□□□ 0.55
TRIM28-203ENST00000593582 ASNSP08243 561 aa18.48■□□□□ 0.55
TRIM28-203ENST00000593582 SPP2Q13103 211 aa18.48■□□□□ 0.55
TRIM28-203ENST00000593582 RRP1BQ14684 758 aaKnown RBP18.48■□□□□ 0.55
TRIM28-203ENST00000593582 SLC4A8Q2Y0W8 1093 aa18.48■□□□□ 0.55
TRIM28-203ENST00000593582 C17orf99Q6UX52 265 aa18.48■□□□□ 0.55
TRIM28-203ENST00000593582 CRNKL1Q9BZJ0 848 aaKnown RBP18.48■□□□□ 0.55
TRIM28-203ENST00000593582 DNAJC18Q9H819 358 aa18.48■□□□□ 0.55
TRIM28-203ENST00000593582 AS3MTQ9HBK9 375 aa18.48■□□□□ 0.55
TRIM28-203ENST00000593582 ECHDC1Q9NTX5 307 aa18.48■□□□□ 0.55
TRIM28-203ENST00000593582 CPA4Q9UI42 421 aa18.48■□□□□ 0.55
TRIM28-203ENST00000593582 PTPN22Q9Y2R2 807 aa18.48■□□□□ 0.55
TRIM28-203ENST00000593582 SLC45A1Q9Y2W3 748 aa18.48■□□□□ 0.55
TRIM28-203ENST00000593582 TCRBV5S4A2TA0A5A2 114 aa18.47■□□□□ 0.55
TRIM28-203ENST00000593582 RGS19P49795 217 aa18.47■□□□□ 0.55
TRIM28-203ENST00000593582 LACTBP83111 547 aaPredicted RBP18.47■□□□□ 0.55
TRIM28-203ENST00000593582 TTC6Q86TZ1 520 aa18.47■□□□□ 0.55
TRIM28-203ENST00000593582 CRBNQ96SW2 442 aa18.47■□□□□ 0.55
TRIM28-203ENST00000593582 GINM1Q9NU53 330 aa18.47■□□□□ 0.55
TRIM28-203ENST00000593582 FOCADQ5VW36 1801 aa18.46■□□□□ 0.55
TRIM28-203ENST00000593582 CYP2C8P10632 490 aa18.46■□□□□ 0.55
TRIM28-203ENST00000593582 ADD2P35612 726 aa18.46■□□□□ 0.55
TRIM28-203ENST00000593582 SOX10P56693 466 aa18.46■□□□□ 0.55
TRIM28-203ENST00000593582 CAP1Q01518 475 aa18.46■□□□□ 0.55
TRIM28-203ENST00000593582 EHD4Q9H223 541 aa18.46■□□□□ 0.55
TRIM28-203ENST00000593582 SERPINB13Q9UIV8 391 aa18.46■□□□□ 0.55
TRIM28-203ENST00000593582 AGTPBP1Q9UPW5 1226 aa18.46■□□□□ 0.55
TRIM28-203ENST00000593582 ADGRA2Q96PE1 1338 aa18.46■□□□□ 0.55
TRIM28-203ENST00000593582 GNRH1P01148 92 aa18.45■□□□□ 0.54
TRIM28-203ENST00000593582 POLR3DP05423 398 aaPredicted RBP18.45■□□□□ 0.54
TRIM28-203ENST00000593582 MLLT1Q03111 559 aaPredicted RBP18.45■□□□□ 0.54
TRIM28-203ENST00000593582 ZSCAN25Q6NSZ9 544 aa18.45■□□□□ 0.54
TRIM28-203ENST00000593582 PROCA1Q8NCQ7 364 aaPredicted RBP18.45■□□□□ 0.54
TRIM28-203ENST00000593582 SMCR8Q8TEV9 937 aaPredicted RBP18.45■□□□□ 0.54
TRIM28-203ENST00000593582 CDK5RAP2Q96SN8 1893 aa18.45■□□□□ 0.54
TRIM28-203ENST00000593582 GDF11O95390 407 aa18.44■□□□□ 0.54
TRIM28-203ENST00000593582 LCORLQ8N3X6 602 aa18.44■□□□□ 0.54
TRIM28-203ENST00000593582 WDR18Q9BV38 432 aa18.44■□□□□ 0.54
TRIM28-203ENST00000593582 ARHGAP39Q9C0H5 1083 aa18.44■□□□□ 0.54
TRIM28-203ENST00000593582 MCM9Q9NXL9 1143 aa18.44■□□□□ 0.54
TRIM28-203ENST00000593582 PNMA3Q9UL41 463 aa18.44■□□□□ 0.54
TRIM28-203ENST00000593582 ZBTB21Q9ULJ3 1066 aa18.44■□□□□ 0.54
TRIM28-203ENST00000593582 SIPA1L1O43166 1804 aa18.44■□□□□ 0.54
TRIM28-203ENST00000593582 HMGCS2P54868 508 aa18.43■□□□□ 0.54
TRIM28-203ENST00000593582 PABPC4Q13310 644 aaKnown RBP eCLIP18.43■□□□□ 0.54
TRIM28-203ENST00000593582 UBE3CQ15386 1083 aa18.43■□□□□ 0.54
TRIM28-203ENST00000593582 TREML2Q5T2D2 321 aa18.43■□□□□ 0.54
TRIM28-203ENST00000593582 TATDN1Q6P1N9 297 aa18.43■□□□□ 0.54
TRIM28-203ENST00000593582 SDR42E1Q8WUS8 393 aa18.43■□□□□ 0.54
TRIM28-203ENST00000593582 ARMT1Q9H993 441 aa18.43■□□□□ 0.54
TRIM28-203ENST00000593582 PHIPQ8WWQ0 1821 aa18.43■□□□□ 0.54
TRIM28-203ENST00000593582 MBD4O95243 580 aa18.42■□□□□ 0.54
TRIM28-203ENST00000593582 BCRP11274 1271 aa18.42■□□□□ 0.54
TRIM28-203ENST00000593582 PSMC4P43686 418 aa18.42■□□□□ 0.54
TRIM28-203ENST00000593582 PLCD1P51178 756 aa18.42■□□□□ 0.54
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