RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 SNRKQ9NRH2 765 aa13.87□□□□□ -0.19
PRKCSH-220ENST00000593104 RAI14Q9P0K7 980 aa13.87□□□□□ -0.19
PRKCSH-220ENST00000593104 PLXNB2O15031 1838 aa13.87□□□□□ -0.19
PRKCSH-220ENST00000593104 MCAMP43121 646 aa13.86□□□□□ -0.19
PRKCSH-220ENST00000593104 RARSP54136 660 aaKnown RBP13.86□□□□□ -0.19
PRKCSH-220ENST00000593104 SPATA5Q8NB90 893 aa13.86□□□□□ -0.19
PRKCSH-220ENST00000593104 SH3RF3Q8TEJ3 882 aaPredicted RBP13.86□□□□□ -0.19
PRKCSH-220ENST00000593104 PAWRQ96IZ0 340 aaKnown RBP13.86□□□□□ -0.19
PRKCSH-220ENST00000593104 OSBPL5Q9H0X9 879 aaPredicted RBP13.86□□□□□ -0.19
PRKCSH-220ENST00000593104 STAP2Q9UGK3 403 aa13.86□□□□□ -0.19
PRKCSH-220ENST00000593104 SLC45A1Q9Y2W3 748 aa13.86□□□□□ -0.19
PRKCSH-220ENST00000593104 CDK5RAP2Q96SN8 1893 aa13.85□□□□□ -0.19
PRKCSH-220ENST00000593104 EVI5O60447 810 aa13.85□□□□□ -0.19
PRKCSH-220ENST00000593104 IRF5Q13568 498 aa13.85□□□□□ -0.19
PRKCSH-220ENST00000593104 MVPQ14764 893 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-220ENST00000593104 SPTY2D1Q68D10 685 aaPredicted RBP13.85□□□□□ -0.19
PRKCSH-220ENST00000593104 ADGRA1Q86SQ6 560 aa13.85□□□□□ -0.19
PRKCSH-220ENST00000593104 PXYLP1Q8TE99 480 aa13.85□□□□□ -0.19
PRKCSH-220ENST00000593104 CLUAP1Q96AJ1 413 aa13.85□□□□□ -0.19
PRKCSH-220ENST00000593104 PAK6Q9NQU5 681 aaPredicted RBP13.85□□□□□ -0.19
PRKCSH-220ENST00000593104 ZMYND8Q9ULU4 1186 aaPredicted RBP13.85□□□□□ -0.19
PRKCSH-220ENST00000593104 SZT2Q5T011 3432 aa13.85□□□□□ -0.19
PRKCSH-220ENST00000593104 PDS5AQ29RF7 1337 aaKnown RBP13.85□□□□□ -0.19
PRKCSH-220ENST00000593104 FAM110CQ1W6H9 321 aa13.84□□□□□ -0.19
PRKCSH-220ENST00000593104 SLF2Q8IX21 1173 aa13.84□□□□□ -0.19
PRKCSH-220ENST00000593104 TEX11Q8IYF3 940 aa13.84□□□□□ -0.19
PRKCSH-220ENST00000593104 ZNF280CQ8ND82 737 aa13.84□□□□□ -0.19
PRKCSH-220ENST00000593104 COA7Q96BR5 231 aa13.84□□□□□ -0.19
PRKCSH-220ENST00000593104 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.84□□□□□ -0.19
PRKCSH-220ENST00000593104 ASCC2Q9H1I8 757 aaPredicted RBP13.84□□□□□ -0.19
PRKCSH-220ENST00000593104 DNAJC18Q9H819 358 aa13.84□□□□□ -0.19
PRKCSH-220ENST00000593104 AATFQ9NY61 560 aaKnown RBP eCLIP13.84□□□□□ -0.19
PRKCSH-220ENST00000593104 AKAP2Q9Y2D5 859 aa13.84□□□□□ -0.19
PRKCSH-220ENST00000593104 DDX60LQ5H9U9 1706 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-220ENST00000593104 TBC1D12O60347 775 aa13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 BCAR3O75815 825 aa13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 GDF11O95390 407 aa13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 SYN1P17600 705 aa13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 ARID4AP29374 1257 aaPredicted RBP13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 CAP2P40123 477 aa13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 MTMR2Q13614 643 aa13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 GORABQ5T7V8 394 aa13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 MAPKAPK5Q8IW41 473 aa13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 C7orf61Q8IZ16 206 aa13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 FRAT1Q92837 279 aaPredicted RBP13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 CRISPLD2Q9H0B8 497 aa13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 TXNRD2Q9NNW7 524 aa13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 GJD2Q9UKL4 321 aa13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 NR2E3Q9Y5X4 410 aa13.83□□□□□ -0.2
PRKCSH-220ENST00000593104 ZBTB22O15209 634 aa13.82□□□□□ -0.2
PRKCSH-220ENST00000593104 TRIM27P14373 513 aa13.82□□□□□ -0.2
PRKCSH-220ENST00000593104 CYP2B6P20813 491 aa13.82□□□□□ -0.2
PRKCSH-220ENST00000593104 MNX1P50219 401 aaPredicted RBP13.82□□□□□ -0.2
PRKCSH-220ENST00000593104 MTX1Q13505 466 aa13.82□□□□□ -0.2
PRKCSH-220ENST00000593104 PROCA1Q8NCQ7 364 aaPredicted RBP13.82□□□□□ -0.2
PRKCSH-220ENST00000593104 TRIB2Q92519 343 aa13.82□□□□□ -0.2
PRKCSH-220ENST00000593104 C1orf115Q9H7X2 142 aa13.82□□□□□ -0.2
PRKCSH-220ENST00000593104 LRP2BPQ9P2M1 347 aa13.82□□□□□ -0.2
PRKCSH-220ENST00000593104 SAP30BPQ9UHR5 308 aaKnown RBP13.82□□□□□ -0.2
PRKCSH-220ENST00000593104 PNMA3Q9UL41 463 aa13.82□□□□□ -0.2
PRKCSH-220ENST00000593104 MAST2Q6P0Q8 1798 aa13.81□□□□□ -0.2
PRKCSH-220ENST00000593104 USP17L5A8MUK1 530 aa13.81□□□□□ -0.2
PRKCSH-220ENST00000593104 GNAI3P08754 354 aa13.81□□□□□ -0.2
PRKCSH-220ENST00000593104 POTEEQ6S8J3 1075 aa13.81□□□□□ -0.2
PRKCSH-220ENST00000593104 TGFBRAP1Q8WUH2 860 aa13.81□□□□□ -0.2
PRKCSH-220ENST00000593104 P2RX7Q99572 595 aaKnown RBP13.81□□□□□ -0.2
PRKCSH-220ENST00000593104 DBNDD2Q9BQY9 259 aa13.81□□□□□ -0.2
PRKCSH-220ENST00000593104 PALD1Q9ULE6 856 aa13.81□□□□□ -0.2
PRKCSH-220ENST00000593104 NDUFB9Q9Y6M9 179 aa13.81□□□□□ -0.2
PRKCSH-220ENST00000593104 NPM3O75607 178 aaKnown RBP13.8□□□□□ -0.2
PRKCSH-220ENST00000593104 HMGCRP04035 888 aa13.8□□□□□ -0.2
PRKCSH-220ENST00000593104 LDHCP07864 332 aa13.8□□□□□ -0.2
PRKCSH-220ENST00000593104 DYNLL1P63167 89 aaKnown RBP13.8□□□□□ -0.2
PRKCSH-220ENST00000593104 GSTO1P78417 241 aa13.8□□□□□ -0.2
PRKCSH-220ENST00000593104 G3BP1Q13283 466 aaKnown RBP eCLIP13.8□□□□□ -0.2
PRKCSH-220ENST00000593104 PIH1D3Q9NQM4 214 aaKnown RBP13.8□□□□□ -0.2
PRKCSH-220ENST00000593104 TLR7Q9NYK1 1049 aaKnown RBP13.8□□□□□ -0.2
PRKCSH-220ENST00000593104 FOCADQ5VW36 1801 aa13.8□□□□□ -0.2
PRKCSH-220ENST00000593104 COL2A1P02458 1487 aaPredicted RBP13.8□□□□□ -0.2
PRKCSH-220ENST00000593104 CT47B1P0C2W7 299 aaPredicted RBP13.79□□□□□ -0.2
PRKCSH-220ENST00000593104 CCL14Q16627 93 aa13.79□□□□□ -0.2
PRKCSH-220ENST00000593104 Q3C1V9 767 aa13.79□□□□□ -0.2
PRKCSH-220ENST00000593104 SH3D19Q5HYK7 790 aa13.79□□□□□ -0.2
PRKCSH-220ENST00000593104 NAA16Q6N069 864 aaPredicted RBP13.79□□□□□ -0.2
PRKCSH-220ENST00000593104 NECAB2Q7Z6G3 386 aa13.79□□□□□ -0.2
PRKCSH-220ENST00000593104 TMEM57Q8N5G2 664 aa13.79□□□□□ -0.2
PRKCSH-220ENST00000593104 HDAC5Q9UQL6 1122 aa13.79□□□□□ -0.2
PRKCSH-220ENST00000593104 FLT1P17948 1338 aa13.79□□□□□ -0.2
PRKCSH-220ENST00000593104 GNAI2P04899 355 aa13.78□□□□□ -0.2
PRKCSH-220ENST00000593104 CYP2E1P05181 493 aaPredicted RBP13.78□□□□□ -0.2
PRKCSH-220ENST00000593104 ZAP70P43403 619 aa13.78□□□□□ -0.2
PRKCSH-220ENST00000593104 GCLCP48506 637 aaPredicted RBP13.78□□□□□ -0.2
PRKCSH-220ENST00000593104 BACE1P56817 501 aa13.78□□□□□ -0.2
PRKCSH-220ENST00000593104 IRX3P78415 501 aaPredicted RBP13.78□□□□□ -0.2
PRKCSH-220ENST00000593104 ZYXQ15942 572 aaKnown RBP13.78□□□□□ -0.2
PRKCSH-220ENST00000593104 TNNI3KQ59H18 835 aa13.78□□□□□ -0.2
PRKCSH-220ENST00000593104 TTC39AQ5SRH9 613 aa13.78□□□□□ -0.2
PRKCSH-220ENST00000593104 Q7L0L9 218 aa13.78□□□□□ -0.2
PRKCSH-220ENST00000593104 PAGR1Q9BTK6 254 aa13.78□□□□□ -0.2
PRKCSH-220ENST00000593104 PORCNQ9H237 461 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms