RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 KIF1BPQ96EK5 621 aa15.97■□□□□ 0.15
PRKCSH-218ENST00000593053 ARHGAP39Q9C0H5 1083 aa15.97■□□□□ 0.15
PRKCSH-218ENST00000593053 ECM2O94769 699 aaPredicted RBP15.96■□□□□ 0.15
PRKCSH-218ENST00000593053 KIF22Q14807 665 aa15.96■□□□□ 0.15
PRKCSH-218ENST00000593053 FASTKD5Q7L8L6 764 aaKnown RBP15.96■□□□□ 0.15
PRKCSH-218ENST00000593053 MAGEB6Q8N7X4 407 aa15.96■□□□□ 0.15
PRKCSH-218ENST00000593053 MIGA1Q8NAN2 632 aa15.96■□□□□ 0.15
PRKCSH-218ENST00000593053 PARK7Q99497 189 aaKnown RBP15.96■□□□□ 0.15
PRKCSH-218ENST00000593053 DHX36Q9H2U1 1008 aaKnown RBP15.96■□□□□ 0.15
PRKCSH-218ENST00000593053 FLT1P17948 1338 aa15.95■□□□□ 0.14
PRKCSH-218ENST00000593053 ADGRA2Q96PE1 1338 aa15.95■□□□□ 0.14
PRKCSH-218ENST00000593053 IFIT2P09913 472 aaKnown RBP15.95■□□□□ 0.14
PRKCSH-218ENST00000593053 CYP2C8P10632 490 aa15.95■□□□□ 0.14
PRKCSH-218ENST00000593053 CAP2P40123 477 aa15.95■□□□□ 0.14
PRKCSH-218ENST00000593053 MAP3K12Q12852 859 aa15.95■□□□□ 0.14
PRKCSH-218ENST00000593053 PDE3AQ14432 1141 aa15.95■□□□□ 0.14
PRKCSH-218ENST00000593053 RRP1BQ14684 758 aaKnown RBP15.95■□□□□ 0.14
PRKCSH-218ENST00000593053 PI4KBQ9UBF8 816 aa15.95■□□□□ 0.14
PRKCSH-218ENST00000593053 SAP30BPQ9UHR5 308 aaKnown RBP15.95■□□□□ 0.14
PRKCSH-218ENST00000593053 HERC5Q9UII4 1024 aaKnown RBP15.95■□□□□ 0.14
PRKCSH-218ENST00000593053 PALD1Q9ULE6 856 aa15.95■□□□□ 0.14
PRKCSH-218ENST00000593053 PTCH2Q9Y6C5 1203 aa15.95■□□□□ 0.14
PRKCSH-218ENST00000593053 RAB11FIP3O75154 756 aa15.94■□□□□ 0.14
PRKCSH-218ENST00000593053 ARMC5Q96C12 935 aa15.94■□□□□ 0.14
PRKCSH-218ENST00000593053 MAST2Q6P0Q8 1798 aa15.94■□□□□ 0.14
PRKCSH-218ENST00000593053 SPP2Q13103 211 aa15.93■□□□□ 0.14
PRKCSH-218ENST00000593053 SLC4A8Q2Y0W8 1093 aa15.93■□□□□ 0.14
PRKCSH-218ENST00000593053 CRACR2BQ8N4Y2 399 aaPredicted RBP15.93■□□□□ 0.14
PRKCSH-218ENST00000593053 TRIM34Q9BYJ4 488 aa15.93■□□□□ 0.14
PRKCSH-218ENST00000593053 CTGFP29279 349 aa15.92■□□□□ 0.14
PRKCSH-218ENST00000593053 PSMC4P43686 418 aa15.92■□□□□ 0.14
PRKCSH-218ENST00000593053 TTF1Q15361 905 aaPredicted RBP15.92■□□□□ 0.14
PRKCSH-218ENST00000593053 SLC9C1Q4G0N8 1177 aa15.92■□□□□ 0.14
PRKCSH-218ENST00000593053 CERS3Q8IU89 383 aa15.92■□□□□ 0.14
PRKCSH-218ENST00000593053 FOXP4Q8IVH2 680 aaPredicted RBP15.92■□□□□ 0.14
PRKCSH-218ENST00000593053 ZNF280CQ8ND82 737 aa15.92■□□□□ 0.14
PRKCSH-218ENST00000593053 TRIM47Q96LD4 638 aa15.92■□□□□ 0.14
PRKCSH-218ENST00000593053 DNAJC2Q99543 621 aaKnown RBP15.92■□□□□ 0.14
PRKCSH-218ENST00000593053 DNAJC18Q9H819 358 aa15.92■□□□□ 0.14
PRKCSH-218ENST00000593053 POTEFA5A3E0 1075 aa15.91■□□□□ 0.14
PRKCSH-218ENST00000593053 USP17L5A8MUK1 530 aa15.91■□□□□ 0.14
PRKCSH-218ENST00000593053 GOLIM4O00461 696 aa15.91■□□□□ 0.14
PRKCSH-218ENST00000593053 FMNL1O95466 1100 aaPredicted RBP15.91■□□□□ 0.14
PRKCSH-218ENST00000593053 GNRH1P01148 92 aa15.91■□□□□ 0.14
PRKCSH-218ENST00000593053 HLA-DOAP06340 250 aa15.91■□□□□ 0.14
PRKCSH-218ENST00000593053 BCRP11274 1271 aa15.91■□□□□ 0.14
PRKCSH-218ENST00000593053 USP5P45974 858 aa15.91■□□□□ 0.14
PRKCSH-218ENST00000593053 TMED8Q6PL24 325 aaPredicted RBP15.91■□□□□ 0.14
PRKCSH-218ENST00000593053 METTL16Q86W50 562 aaKnown RBP15.91■□□□□ 0.14
PRKCSH-218ENST00000593053 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.91■□□□□ 0.14
PRKCSH-218ENST00000593053 AGTPBP1Q9UPW5 1226 aa15.91■□□□□ 0.14
PRKCSH-218ENST00000593053 SLC45A1Q9Y2W3 748 aa15.91■□□□□ 0.14
PRKCSH-218ENST00000593053 GDF11O95390 407 aa15.9■□□□□ 0.14
PRKCSH-218ENST00000593053 PDE6AP16499 860 aa15.9■□□□□ 0.14
PRKCSH-218ENST00000593053 HMGCS2P54868 508 aa15.9■□□□□ 0.14
PRKCSH-218ENST00000593053 JAG1P78504 1218 aa15.9■□□□□ 0.14
PRKCSH-218ENST00000593053 TREML2Q5T2D2 321 aa15.9■□□□□ 0.14
PRKCSH-218ENST00000593053 SLC9C2Q5TAH2 1124 aa15.9■□□□□ 0.14
PRKCSH-218ENST00000593053 NBPF11Q86T75 865 aa15.9■□□□□ 0.14
PRKCSH-218ENST00000593053 PROCA1Q8NCQ7 364 aaPredicted RBP15.9■□□□□ 0.14
PRKCSH-218ENST00000593053 SMCR8Q8TEV9 937 aaPredicted RBP15.9■□□□□ 0.14
PRKCSH-218ENST00000593053 EDC3Q96F86 508 aaKnown RBP15.9■□□□□ 0.14
PRKCSH-218ENST00000593053 ZNF333Q96JL9 665 aa15.9■□□□□ 0.14
PRKCSH-218ENST00000593053 TBC1D2Q9BYX2 928 aa15.9■□□□□ 0.14
PRKCSH-218ENST00000593053 DOCK1Q14185 1865 aa15.9■□□□□ 0.14
PRKCSH-218ENST00000593053 CENPFP49454 3210 aa15.89■□□□□ 0.13
PRKCSH-218ENST00000593053 MAGEB6P1A0A0J9YX57 407 aa15.89■□□□□ 0.13
PRKCSH-218ENST00000593053 ASNSP08243 561 aa15.89■□□□□ 0.13
PRKCSH-218ENST00000593053 OSBPP22059 807 aa15.89■□□□□ 0.13
PRKCSH-218ENST00000593053 PRMT2P55345 433 aa15.89■□□□□ 0.13
PRKCSH-218ENST00000593053 SHROOM1Q2M3G4 852 aaPredicted RBP15.89■□□□□ 0.13
PRKCSH-218ENST00000593053 SH3TC2Q8TF17 1288 aa15.89■□□□□ 0.13
PRKCSH-218ENST00000593053 RIOK1Q9BRS2 568 aaKnown RBP15.89■□□□□ 0.13
PRKCSH-218ENST00000593053 BOLA2Q9H3K6 86 aa15.89■□□□□ 0.13
PRKCSH-218ENST00000593053 AS3MTQ9HBK9 375 aa15.89■□□□□ 0.13
PRKCSH-218ENST00000593053 SRRDQ9UH36 339 aa15.89■□□□□ 0.13
PRKCSH-218ENST00000593053 TNRC18O15417 2968 aaPredicted RBP15.88■□□□□ 0.13
PRKCSH-218ENST00000593053 SMARCA5O60264 1052 aaPredicted RBP15.88■□□□□ 0.13
PRKCSH-218ENST00000593053 MYCP01106 439 aaPredicted RBP15.88■□□□□ 0.13
PRKCSH-218ENST00000593053 HOXD10P28358 340 aa15.88■□□□□ 0.13
PRKCSH-218ENST00000593053 FCGRTP55899 365 aa15.88■□□□□ 0.13
PRKCSH-218ENST00000593053 WDR18Q9BV38 432 aa15.88■□□□□ 0.13
PRKCSH-218ENST00000593053 TMEM106CQ9BVX2 250 aa15.88■□□□□ 0.13
PRKCSH-218ENST00000593053 LRRCC1Q9C099 1032 aa15.88■□□□□ 0.13
PRKCSH-218ENST00000593053 PNMA3Q9UL41 463 aa15.88■□□□□ 0.13
PRKCSH-218ENST00000593053 ZNF532Q9HCE3 1301 aa15.88■□□□□ 0.13
PRKCSH-218ENST00000593053 ZSWIM8A7E2V4 1837 aa15.87■□□□□ 0.13
PRKCSH-218ENST00000593053 ATP5JP18859 108 aa15.87■□□□□ 0.13
PRKCSH-218ENST00000593053 MTMR2Q13614 643 aa15.87■□□□□ 0.13
PRKCSH-218ENST00000593053 SH3D19Q5HYK7 790 aa15.87■□□□□ 0.13
PRKCSH-218ENST00000593053 RAET1EQ8TD07 263 aa15.87■□□□□ 0.13
PRKCSH-218ENST00000593053 PAG1Q9NWQ8 432 aa15.87■□□□□ 0.13
PRKCSH-218ENST00000593053 ZBTB21Q9ULJ3 1066 aa15.87■□□□□ 0.13
PRKCSH-218ENST00000593053 MYPNQ86TC9 1320 aa15.87■□□□□ 0.13
PRKCSH-218ENST00000593053 TCRBV5S4A2TA0A5A2 114 aa15.86■□□□□ 0.13
PRKCSH-218ENST00000593053 EN2P19622 333 aaPredicted RBP15.86■□□□□ 0.13
PRKCSH-218ENST00000593053 BACE1P56817 501 aa15.86■□□□□ 0.13
PRKCSH-218ENST00000593053 PRKCZQ05513 592 aa15.86■□□□□ 0.13
PRKCSH-218ENST00000593053 PABPC4Q13310 644 aaKnown RBP eCLIP15.86■□□□□ 0.132e-10■■■□□ 15.1
PRKCSH-218ENST00000593053 TTC6Q86TZ1 520 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms