RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 SRRDQ9UH36 339 aa16.25■□□□□ 0.19
APOC1-209ENST00000592885 DBNLQ9UJU6 430 aaKnown RBP16.25■□□□□ 0.19
APOC1-209ENST00000592885 CYP2E1P05181 493 aaPredicted RBP16.24■□□□□ 0.19
APOC1-209ENST00000592885 FCGRTP55899 365 aa16.24■□□□□ 0.19
APOC1-209ENST00000592885 HSP90AB4PQ58FF6 505 aa16.24■□□□□ 0.19
APOC1-209ENST00000592885 GADL1Q6ZQY3 521 aa16.24■□□□□ 0.19
APOC1-209ENST00000592885 PROCA1Q8NCQ7 364 aaPredicted RBP16.24■□□□□ 0.19
APOC1-209ENST00000592885 TRIM47Q96LD4 638 aa16.24■□□□□ 0.19
APOC1-209ENST00000592885 SNRKQ9NRH2 765 aa16.24■□□□□ 0.19
APOC1-209ENST00000592885 AATFQ9NY61 560 aaKnown RBP eCLIP16.24■□□□□ 0.19
APOC1-209ENST00000592885 PI4KBQ9UBF8 816 aa16.24■□□□□ 0.19
APOC1-209ENST00000592885 PNMA3Q9UL41 463 aa16.24■□□□□ 0.19
APOC1-209ENST00000592885 AGTPBP1Q9UPW5 1226 aa16.24■□□□□ 0.19
APOC1-209ENST00000592885 TRIM75PA6NK02 468 aa16.23■□□□□ 0.19
APOC1-209ENST00000592885 FMNL1O95466 1100 aaPredicted RBP16.23■□□□□ 0.19
APOC1-209ENST00000592885 CYP2C8P10632 490 aa16.23■□□□□ 0.19
APOC1-209ENST00000592885 OSBPP22059 807 aa16.23■□□□□ 0.19
APOC1-209ENST00000592885 CAP2P40123 477 aa16.23■□□□□ 0.19
APOC1-209ENST00000592885 ZAP70P43403 619 aa16.23■□□□□ 0.19
APOC1-209ENST00000592885 FLT1P17948 1338 aa16.22■□□□□ 0.19
APOC1-209ENST00000592885 MYPNQ86TC9 1320 aa16.22■□□□□ 0.19
APOC1-209ENST00000592885 CTGFP29279 349 aa16.22■□□□□ 0.19
APOC1-209ENST00000592885 SLC4A8Q2Y0W8 1093 aa16.22■□□□□ 0.19
APOC1-209ENST00000592885 METTL16Q86W50 562 aaKnown RBP16.22■□□□□ 0.19
APOC1-209ENST00000592885 RAET1EQ8TD07 263 aa16.22■□□□□ 0.19
APOC1-209ENST00000592885 SMCR8Q8TEV9 937 aaPredicted RBP16.22■□□□□ 0.19
APOC1-209ENST00000592885 EAF2Q96CJ1 260 aaPredicted RBP16.22■□□□□ 0.19
APOC1-209ENST00000592885 AS3MTQ9HBK9 375 aa16.22■□□□□ 0.19
APOC1-209ENST00000592885 GINM1Q9NU53 330 aa16.22■□□□□ 0.19
APOC1-209ENST00000592885 TLR7Q9NYK1 1049 aaKnown RBP16.22■□□□□ 0.19
APOC1-209ENST00000592885 FAM196BA6NMK8 535 aa16.21■□□□□ 0.19
APOC1-209ENST00000592885 USP17L5A8MUK1 530 aa16.21■□□□□ 0.19
APOC1-209ENST00000592885 SLURP2P0DP57 97 aa16.21■□□□□ 0.19
APOC1-209ENST00000592885 EN2P19622 333 aaPredicted RBP16.21■□□□□ 0.19
APOC1-209ENST00000592885 PABPC4Q13310 644 aaKnown RBP eCLIP16.21■□□□□ 0.192e-8■■■■■ 46.6
APOC1-209ENST00000592885 ADGRA1Q86SQ6 560 aa16.21■□□□□ 0.19
APOC1-209ENST00000592885 ZNF280CQ8ND82 737 aa16.21■□□□□ 0.19
APOC1-209ENST00000592885 PANK1Q8TE04 598 aa16.21■□□□□ 0.19
APOC1-209ENST00000592885 SH3TC2Q8TF17 1288 aa16.21■□□□□ 0.19
APOC1-209ENST00000592885 GCC1Q96CN9 775 aa16.21■□□□□ 0.19
APOC1-209ENST00000592885 CCDC8Q9H0W5 538 aaPredicted RBP16.21■□□□□ 0.19
APOC1-209ENST00000592885 CHMP4BQ9H444 224 aaKnown RBP16.21■□□□□ 0.19
APOC1-209ENST00000592885 PIH1D3Q9NQM4 214 aaKnown RBP16.21■□□□□ 0.19
APOC1-209ENST00000592885 DDX19BQ9UMR2 479 aa16.21■□□□□ 0.19
APOC1-209ENST00000592885 MYH1P12882 1939 aa16.2■□□□□ 0.18
APOC1-209ENST00000592885 ASNSP08243 561 aa16.2■□□□□ 0.18
APOC1-209ENST00000592885 GRK4P32298 578 aa16.2■□□□□ 0.18
APOC1-209ENST00000592885 SH3D19Q5HYK7 790 aa16.2■□□□□ 0.18
APOC1-209ENST00000592885 FOXP4Q8IVH2 680 aaPredicted RBP16.2■□□□□ 0.18
APOC1-209ENST00000592885 SLAIN1Q8ND83 568 aa16.2■□□□□ 0.18
APOC1-209ENST00000592885 TGFBRAP1Q8WUH2 860 aa16.2■□□□□ 0.18
APOC1-209ENST00000592885 DDX60LQ5H9U9 1706 aaKnown RBP16.19■□□□□ 0.18
APOC1-209ENST00000592885 CENPFP49454 3210 aa16.19■□□□□ 0.18
APOC1-209ENST00000592885 HMMRO75330 724 aa16.19■□□□□ 0.18
APOC1-209ENST00000592885 IDH1O75874 414 aaKnown RBP16.19■□□□□ 0.18
APOC1-209ENST00000592885 HLA-DOAP06340 250 aa16.19■□□□□ 0.18
APOC1-209ENST00000592885 MAP3K12Q12852 859 aa16.19■□□□□ 0.18
APOC1-209ENST00000592885 SPP2Q13103 211 aa16.19■□□□□ 0.18
APOC1-209ENST00000592885 FAM110CQ1W6H9 321 aa16.19■□□□□ 0.18
APOC1-209ENST00000592885 AACSQ86V21 672 aa16.19■□□□□ 0.18
APOC1-209ENST00000592885 MAPKAPK5Q8IW41 473 aa16.19■□□□□ 0.18
APOC1-209ENST00000592885 RPAP2Q8IXW5 612 aaPredicted RBP16.19■□□□□ 0.18
APOC1-209ENST00000592885 NKX2-3Q8TAU0 364 aa16.19■□□□□ 0.18
APOC1-209ENST00000592885 WDR18Q9BV38 432 aa16.19■□□□□ 0.18
APOC1-209ENST00000592885 TRIM34Q9BYJ4 488 aa16.19■□□□□ 0.18
APOC1-209ENST00000592885 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.19■□□□□ 0.18
APOC1-209ENST00000592885 EXOC6BQ9Y2D4 811 aa16.19■□□□□ 0.18
APOC1-209ENST00000592885 CYP7A1P22680 504 aa16.18■□□□□ 0.18
APOC1-209ENST00000592885 GCLCP48506 637 aaPredicted RBP16.18■□□□□ 0.18
APOC1-209ENST00000592885 UBXN2AP68543 259 aa16.18■□□□□ 0.18
APOC1-209ENST00000592885 PRKCZQ05513 592 aa16.18■□□□□ 0.18
APOC1-209ENST00000592885 TREML2Q5T2D2 321 aa16.18■□□□□ 0.18
APOC1-209ENST00000592885 CCDC84Q86UT8 332 aaPredicted RBP16.18■□□□□ 0.18
APOC1-209ENST00000592885 CRACR2BQ8N4Y2 399 aaPredicted RBP16.18■□□□□ 0.18
APOC1-209ENST00000592885 RHPN1Q8TCX5 695 aa16.18■□□□□ 0.18
APOC1-209ENST00000592885 NAV1Q8NEY1 1877 aa16.17■□□□□ 0.18
APOC1-209ENST00000592885 TNPO2O14787 897 aaKnown RBP16.17■□□□□ 0.18
APOC1-209ENST00000592885 CAPN2P17655 700 aa16.17■□□□□ 0.18
APOC1-209ENST00000592885 IRF5Q13568 498 aa16.17■□□□□ 0.18
APOC1-209ENST00000592885 RRP1BQ14684 758 aaKnown RBP16.17■□□□□ 0.18
APOC1-209ENST00000592885 TTF1Q15361 905 aaPredicted RBP16.17■□□□□ 0.18
APOC1-209ENST00000592885 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.17■□□□□ 0.18
APOC1-209ENST00000592885 KIF1BPQ96EK5 621 aa16.17■□□□□ 0.18
APOC1-209ENST00000592885 DNAJC18Q9H819 358 aa16.17■□□□□ 0.18
APOC1-209ENST00000592885 BRCA2P51587 3418 aa16.17■□□□□ 0.18
APOC1-209ENST00000592885 C19orf81C9J6K1 198 aa16.16■□□□□ 0.18
APOC1-209ENST00000592885 HMGCS2P54868 508 aa16.16■□□□□ 0.18
APOC1-209ENST00000592885 CLASRPQ8N2M8 674 aaKnown RBP16.16■□□□□ 0.18
APOC1-209ENST00000592885 MAGEB6Q8N7X4 407 aa16.16■□□□□ 0.18
APOC1-209ENST00000592885 PXYLP1Q8TE99 480 aa16.16■□□□□ 0.18
APOC1-209ENST00000592885 EHD4Q9H223 541 aa16.16■□□□□ 0.18
APOC1-209ENST00000592885 PALD1Q9ULE6 856 aa16.16■□□□□ 0.18
APOC1-209ENST00000592885 ECM2O94769 699 aaPredicted RBP16.15■□□□□ 0.18
APOC1-209ENST00000592885 BACE1P56817 501 aa16.15■□□□□ 0.18
APOC1-209ENST00000592885 DYNLL1P63167 89 aaKnown RBP16.15■□□□□ 0.18
APOC1-209ENST00000592885 ANKRD13CQ8N6S4 541 aa16.15■□□□□ 0.18
APOC1-209ENST00000592885 COA7Q96BR5 231 aa16.15■□□□□ 0.18
APOC1-209ENST00000592885 ZBTB40Q9NUA8 1239 aa16.15■□□□□ 0.18
APOC1-209ENST00000592885 TMOD4Q9NZQ9 345 aa16.15■□□□□ 0.18
APOC1-209ENST00000592885 ZBTB21Q9ULJ3 1066 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms