RNA–Protein interactions for RNA: ENST00000592860.2

CFD-202, Transcript of complement factor D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CFD, Length 809 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFD-202ENST00000592860 IL1RAPL2Q9NP60 686 aa28.22■■■□□ 2.11
CFD-202ENST00000592860 PDE4DIPQ5VU43 2346 aa28.21■■■□□ 2.11
CFD-202ENST00000592860 FLT1P17948 1338 aa28.21■■■□□ 2.11
CFD-202ENST00000592860 SLC9C1Q4G0N8 1177 aa28.21■■■□□ 2.11
CFD-202ENST00000592860 TRIM47Q96LD4 638 aa28.21■■■□□ 2.11
CFD-202ENST00000592860 PLCG2P16885 1265 aa28.2■■■□□ 2.1
CFD-202ENST00000592860 PSMC4P43686 418 aa28.2■■■□□ 2.1
CFD-202ENST00000592860 DYNLL1P63167 89 aaKnown RBP28.2■■■□□ 2.1
CFD-202ENST00000592860 SIRT2Q8IXJ6 389 aa28.2■■■□□ 2.1
CFD-202ENST00000592860 ANTXR1Q9H6X2 564 aa28.2■■■□□ 2.1
CFD-202ENST00000592860 ZBTB40Q9NUA8 1239 aa28.2■■■□□ 2.1
CFD-202ENST00000592860 IDH1O75874 414 aaKnown RBP28.19■■■□□ 2.1
CFD-202ENST00000592860 BCRP11274 1271 aa28.19■■■□□ 2.1
CFD-202ENST00000592860 RHPN1Q8TCX5 695 aa28.19■■■□□ 2.1
CFD-202ENST00000592860 SH3TC2Q8TF17 1288 aa28.19■■■□□ 2.1
CFD-202ENST00000592860 RCAN3Q9UKA8 241 aa28.19■■■□□ 2.1
CFD-202ENST00000592860 PHIPQ8WWQ0 1821 aa28.18■■■□□ 2.1
CFD-202ENST00000592860 CYP7A1P22680 504 aa28.18■■■□□ 2.1
CFD-202ENST00000592860 CAP2P40123 477 aa28.18■■■□□ 2.1
CFD-202ENST00000592860 PI4KBQ9UBF8 816 aa28.18■■■□□ 2.1
CFD-202ENST00000592860 HERC5Q9UII4 1024 aaKnown RBP28.18■■■□□ 2.1
CFD-202ENST00000592860 DDX19BQ9UMR2 479 aa28.18■■■□□ 2.1
CFD-202ENST00000592860 APBB1O00213 710 aa28.17■■■□□ 2.1
CFD-202ENST00000592860 IGSF3O75054 1194 aa28.17■■■□□ 2.1
CFD-202ENST00000592860 GNRH1P01148 92 aa28.17■■■□□ 2.1
CFD-202ENST00000592860 OSBPP22059 807 aa28.17■■■□□ 2.1
CFD-202ENST00000592860 MIGA1Q8NAN2 632 aa28.17■■■□□ 2.1
CFD-202ENST00000592860 DHX36Q9H2U1 1008 aaKnown RBP28.17■■■□□ 2.1
CFD-202ENST00000592860 DNAJC18Q9H819 358 aa28.17■■■□□ 2.1
CFD-202ENST00000592860 SLC45A1Q9Y2W3 748 aa28.17■■■□□ 2.1
CFD-202ENST00000592860 SIPA1L1O43166 1804 aa28.16■■■□□ 2.1
CFD-202ENST00000592860 MYCP01106 439 aaPredicted RBP28.16■■■□□ 2.1
CFD-202ENST00000592860 EN2P19622 333 aaPredicted RBP28.16■■■□□ 2.1
CFD-202ENST00000592860 HSP90AB4PQ58FF6 505 aa28.16■■■□□ 2.1
CFD-202ENST00000592860 TREML2Q5T2D2 321 aa28.16■■■□□ 2.1
CFD-202ENST00000592860 RPAP2Q8IXW5 612 aaPredicted RBP28.16■■■□□ 2.1
CFD-202ENST00000592860 MAGEB6Q8N7X4 407 aa28.16■■■□□ 2.1
CFD-202ENST00000592860 SRRDQ9UH36 339 aa28.16■■■□□ 2.1
CFD-202ENST00000592860 SAP30BPQ9UHR5 308 aaKnown RBP28.16■■■□□ 2.1
CFD-202ENST00000592860 PALD1Q9ULE6 856 aa28.16■■■□□ 2.1
CFD-202ENST00000592860 AGTPBP1Q9UPW5 1226 aa28.16■■■□□ 2.1
CFD-202ENST00000592860 MYO5AQ9Y4I1 1855 aaKnown RBP28.16■■■□□ 2.1
CFD-202ENST00000592860 FMNL1O95466 1100 aaPredicted RBP28.15■■■□□ 2.1
CFD-202ENST00000592860 JAG1P78504 1218 aa28.15■■■□□ 2.1
CFD-202ENST00000592860 SPP2Q13103 211 aa28.15■■■□□ 2.1
CFD-202ENST00000592860 NBPF11Q86T75 865 aa28.15■■■□□ 2.1
CFD-202ENST00000592860 PRMT2P55345 433 aa28.14■■■□□ 2.1
CFD-202ENST00000592860 SHROOM1Q2M3G4 852 aaPredicted RBP28.14■■■□□ 2.1
CFD-202ENST00000592860 C20orf194Q5TEA3 1177 aa28.14■■■□□ 2.1
CFD-202ENST00000592860 ZNF280CQ8ND82 737 aa28.14■■■□□ 2.1
CFD-202ENST00000592860 PTPRFP10586 1907 aa28.14■■■□□ 2.09
CFD-202ENST00000592860 SLC4A8Q2Y0W8 1093 aa28.13■■■□□ 2.09
CFD-202ENST00000592860 METTL16Q86W50 562 aaKnown RBP28.13■■■□□ 2.09
CFD-202ENST00000592860 KIAA0100Q14667 2235 aaKnown RBP28.12■■■□□ 2.09
CFD-202ENST00000592860 USP17L5A8MUK1 530 aa28.12■■■□□ 2.09
CFD-202ENST00000592860 PRPF38BQ5VTL8 546 aaKnown RBP28.12■■■□□ 2.09
CFD-202ENST00000592860 KIF1BPQ96EK5 621 aa28.12■■■□□ 2.09
CFD-202ENST00000592860 TMEM106CQ9BVX2 250 aa28.12■■■□□ 2.09
CFD-202ENST00000592860 MYPNQ86TC9 1320 aa28.12■■■□□ 2.09
CFD-202ENST00000592860 RBBP6Q7Z6E9 1792 aaKnown RBP28.11■■■□□ 2.09
CFD-202ENST00000592860 HMMRO75330 724 aa28.11■■■□□ 2.09
CFD-202ENST00000592860 HMGCS2P54868 508 aa28.11■■■□□ 2.09
CFD-202ENST00000592860 MAP3K12Q12852 859 aa28.11■■■□□ 2.09
CFD-202ENST00000592860 PROCA1Q8NCQ7 364 aaPredicted RBP28.11■■■□□ 2.09
CFD-202ENST00000592860 SMCR8Q8TEV9 937 aaPredicted RBP28.11■■■□□ 2.09
CFD-202ENST00000592860 BCL11AQ9H165 835 aa28.11■■■□□ 2.09
CFD-202ENST00000592860 GDF11O95390 407 aa28.1■■■□□ 2.09
CFD-202ENST00000592860 FCGRTP55899 365 aa28.1■■■□□ 2.09
CFD-202ENST00000592860 PRKCZQ05513 592 aa28.1■■■□□ 2.09
CFD-202ENST00000592860 FOXP4Q8IVH2 680 aaPredicted RBP28.1■■■□□ 2.09
CFD-202ENST00000592860 CLASRPQ8N2M8 674 aaKnown RBP28.1■■■□□ 2.09
CFD-202ENST00000592860 CRACR2BQ8N4Y2 399 aaPredicted RBP28.1■■■□□ 2.09
CFD-202ENST00000592860 TBC1D2Q9BYX2 928 aa28.1■■■□□ 2.09
CFD-202ENST00000592860 FOCADQ5VW36 1801 aa28.09■■■□□ 2.09
CFD-202ENST00000592860 CDK5RAP2Q96SN8 1893 aa28.09■■■□□ 2.09
CFD-202ENST00000592860 HOXD10P28358 340 aa28.09■■■□□ 2.09
CFD-202ENST00000592860 RAET1EQ8TD07 263 aa28.09■■■□□ 2.09
CFD-202ENST00000592860 TRIM34Q9BYJ4 488 aa28.08■■■□□ 2.09
CFD-202ENST00000592860 GABRQQ9UN88 632 aa28.08■■■□□ 2.09
CFD-202ENST00000592860 ATAD5Q96QE3 1844 aa28.08■■■□□ 2.09
CFD-202ENST00000592860 HLA-DOAP06340 250 aa28.07■■■□□ 2.08
CFD-202ENST00000592860 ASNSP08243 561 aa28.07■■■□□ 2.08
CFD-202ENST00000592860 IFIT2P09913 472 aaKnown RBP28.07■■■□□ 2.08
CFD-202ENST00000592860 USP5P45974 858 aa28.07■■■□□ 2.08
CFD-202ENST00000592860 MTMR2Q13614 643 aa28.07■■■□□ 2.08
CFD-202ENST00000592860 MTFR1Q15390 333 aa28.07■■■□□ 2.08
CFD-202ENST00000592860 SH3D19Q5HYK7 790 aa28.07■■■□□ 2.08
CFD-202ENST00000592860 ANKRD13CQ8N6S4 541 aa28.07■■■□□ 2.08
CFD-202ENST00000592860 RIOK1Q9BRS2 568 aaKnown RBP28.07■■■□□ 2.08
CFD-202ENST00000592860 WDR18Q9BV38 432 aa28.07■■■□□ 2.08
CFD-202ENST00000592860 AS3MTQ9HBK9 375 aa28.07■■■□□ 2.08
CFD-202ENST00000592860 LOC285556D6RIA3 1793 aa28.06■■■□□ 2.08
CFD-202ENST00000592860 RAB11FIP3O75154 756 aa28.06■■■□□ 2.08
CFD-202ENST00000592860 GRK4P32298 578 aa28.06■■■□□ 2.08
CFD-202ENST00000592860 CERS3Q8IU89 383 aa28.06■■■□□ 2.08
CFD-202ENST00000592860 DNAJC2Q99543 621 aaKnown RBP28.06■■■□□ 2.08
CFD-202ENST00000592860 PNMA3Q9UL41 463 aa28.06■■■□□ 2.08
CFD-202ENST00000592860 ZBTB21Q9ULJ3 1066 aa28.06■■■□□ 2.08
CFD-202ENST00000592860 GOLIM4O00461 696 aa28.05■■■□□ 2.08
CFD-202ENST00000592860 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms