RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.32□□□□□ -0.121e-8■■■■■ 50
H3F3B-212ENST00000592643 DCP1AQ9NPI6 582 aaPredicted RBP14.32□□□□□ -0.12
H3F3B-212ENST00000592643 SPDYE5A6NIY4 337 aa14.31□□□□□ -0.12
H3F3B-212ENST00000592643 FOXN1O15353 648 aa14.31□□□□□ -0.12
H3F3B-212ENST00000592643 CYP2D6P10635 497 aa14.31□□□□□ -0.12
H3F3B-212ENST00000592643 ZMYM1Q5SVZ6 1142 aa14.31□□□□□ -0.12
H3F3B-212ENST00000592643 NOL9Q5SY16 702 aaKnown RBP14.31□□□□□ -0.12
H3F3B-212ENST00000592643 DCAF15Q66K64 600 aa14.31□□□□□ -0.12
H3F3B-212ENST00000592643 APPBP2Q92624 585 aa14.31□□□□□ -0.12
H3F3B-212ENST00000592643 OPTNQ96CV9 577 aa14.31□□□□□ -0.12
H3F3B-212ENST00000592643 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.31□□□□□ -0.12
H3F3B-212ENST00000592643 GSG1L2A8MUP6 293 aa14.3□□□□□ -0.12
H3F3B-212ENST00000592643 USP5P45974 858 aa14.3□□□□□ -0.12
H3F3B-212ENST00000592643 GABPAQ06546 454 aa14.3□□□□□ -0.12
H3F3B-212ENST00000592643 CCDC84Q86UT8 332 aaPredicted RBP14.3□□□□□ -0.12
H3F3B-212ENST00000592643 CERS3Q8IU89 383 aa14.3□□□□□ -0.12
H3F3B-212ENST00000592643 EVI5LQ96CN4 794 aa14.3□□□□□ -0.12
H3F3B-212ENST00000592643 HOOK2Q96ED9 719 aa14.3□□□□□ -0.12
H3F3B-212ENST00000592643 PTPN18Q99952 460 aa14.3□□□□□ -0.12
H3F3B-212ENST00000592643 FSD1Q9BTV5 496 aa14.3□□□□□ -0.12
H3F3B-212ENST00000592643 DHX36Q9H2U1 1008 aaKnown RBP14.3□□□□□ -0.12
H3F3B-212ENST00000592643 EPB41L4AQ9HCS5 686 aaPredicted RBP14.3□□□□□ -0.12
H3F3B-212ENST00000592643 PI4KBQ9UBF8 816 aa14.3□□□□□ -0.12
H3F3B-212ENST00000592643 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
H3F3B-212ENST00000592643 CYP2D7A0A087X1C5 515 aa14.29□□□□□ -0.12
H3F3B-212ENST00000592643 IRF6O14896 467 aa14.29□□□□□ -0.12
H3F3B-212ENST00000592643 GPAA1O43292 621 aa14.29□□□□□ -0.12
H3F3B-212ENST00000592643 ZBTB48P10074 688 aaPredicted RBP14.29□□□□□ -0.12
H3F3B-212ENST00000592643 TM4SF4P48230 202 aa14.29□□□□□ -0.12
H3F3B-212ENST00000592643 MOGSQ13724 837 aa14.29□□□□□ -0.12
H3F3B-212ENST00000592643 ZSCAN25Q6NSZ9 544 aa14.29□□□□□ -0.12
H3F3B-212ENST00000592643 OTUD5Q96G74 571 aa14.29□□□□□ -0.12
H3F3B-212ENST00000592643 FAM227BQ96M60 508 aa14.29□□□□□ -0.12
H3F3B-212ENST00000592643 CRNKL1Q9BZJ0 848 aaKnown RBP14.29□□□□□ -0.12
H3F3B-212ENST00000592643 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.29□□□□□ -0.12
H3F3B-212ENST00000592643 A0A0D9SFI3 127 aa14.28□□□□□ -0.12
H3F3B-212ENST00000592643 TESPA1A2RU30 521 aaPredicted RBP14.28□□□□□ -0.12
H3F3B-212ENST00000592643 IGF2BP3O00425 579 aaKnown RBP eCLIP14.28□□□□□ -0.12
H3F3B-212ENST00000592643 ZFYP08048 801 aaPredicted RBP14.28□□□□□ -0.12
H3F3B-212ENST00000592643 PTPRAP18433 802 aa14.28□□□□□ -0.12
H3F3B-212ENST00000592643 MAP2K1Q02750 393 aaPredicted RBP14.28□□□□□ -0.12
H3F3B-212ENST00000592643 CCDC129Q6ZRS4 1044 aa14.28□□□□□ -0.12
H3F3B-212ENST00000592643 SCYL3Q8IZE3 742 aa14.28□□□□□ -0.12
H3F3B-212ENST00000592643 BRI3BPQ8WY22 251 aa14.28□□□□□ -0.12
H3F3B-212ENST00000592643 EHD4Q9H223 541 aa14.28□□□□□ -0.12
H3F3B-212ENST00000592643 IL25Q9H293 177 aa14.28□□□□□ -0.12
H3F3B-212ENST00000592643 R3HDMLQ9H3Y0 253 aa14.28□□□□□ -0.12
H3F3B-212ENST00000592643 HERC5Q9UII4 1024 aaKnown RBP14.28□□□□□ -0.12
H3F3B-212ENST00000592643 TSKSQ9UJT2 592 aa14.28□□□□□ -0.12
H3F3B-212ENST00000592643 CSADQ9Y600 493 aa14.28□□□□□ -0.12
H3F3B-212ENST00000592643 SLC4A4Q9Y6R1 1079 aa14.28□□□□□ -0.12
H3F3B-212ENST00000592643 CTNND1O60716 968 aaKnown RBP14.27□□□□□ -0.13
H3F3B-212ENST00000592643 HSPA8P11142 646 aaKnown RBP14.27□□□□□ -0.13
H3F3B-212ENST00000592643 SHMT1P34896 483 aa14.27□□□□□ -0.13
H3F3B-212ENST00000592643 CAP2P40123 477 aa14.27□□□□□ -0.13
H3F3B-212ENST00000592643 VPS53Q5VIR6 699 aa14.27□□□□□ -0.13
H3F3B-212ENST00000592643 TATDN1Q6P1N9 297 aa14.27□□□□□ -0.13
H3F3B-212ENST00000592643 CTR9Q6PD62 1173 aa14.27□□□□□ -0.13
H3F3B-212ENST00000592643 ERO1BQ86YB8 467 aa14.27□□□□□ -0.13
H3F3B-212ENST00000592643 FOXP4Q8IVH2 680 aaPredicted RBP14.27□□□□□ -0.13
H3F3B-212ENST00000592643 SLC44A5Q8NCS7 719 aa14.27□□□□□ -0.13
H3F3B-212ENST00000592643 AIDAQ96BJ3 306 aa14.27□□□□□ -0.13
H3F3B-212ENST00000592643 RNF186Q9NXI6 227 aa14.27□□□□□ -0.13
H3F3B-212ENST00000592643 MCM9Q9NXL9 1143 aa14.27□□□□□ -0.13
H3F3B-212ENST00000592643 MYH7P12883 1935 aa14.27□□□□□ -0.13
H3F3B-212ENST00000592643 USP17L12C9JPN9 530 aa14.26□□□□□ -0.13
H3F3B-212ENST00000592643 USP17L21D6R901 530 aa14.26□□□□□ -0.13
H3F3B-212ENST00000592643 NMIQ13287 307 aaPredicted RBP14.26□□□□□ -0.13
H3F3B-212ENST00000592643 PPIL2Q13356 520 aa14.26□□□□□ -0.13
H3F3B-212ENST00000592643 TTC22Q5TAA0 569 aa14.26□□□□□ -0.13
H3F3B-212ENST00000592643 C12orf60Q5U649 245 aa14.26□□□□□ -0.13
H3F3B-212ENST00000592643 CENPQQ7L2Z9 268 aaPredicted RBP14.26□□□□□ -0.13
H3F3B-212ENST00000592643 ZNF589Q86UQ0 364 aaPredicted RBP14.26□□□□□ -0.13
H3F3B-212ENST00000592643 DYNLL2Q96FJ2 89 aa14.26□□□□□ -0.13
H3F3B-212ENST00000592643 ATP8A2Q9NTI2 1148 aa14.26□□□□□ -0.13
H3F3B-212ENST00000592643 KCNH4Q9UQ05 1017 aa14.26□□□□□ -0.13
H3F3B-212ENST00000592643 AFG3L2Q9Y4W6 797 aa14.26□□□□□ -0.13
H3F3B-212ENST00000592643 LAMB1P07942 1786 aa14.26□□□□□ -0.13
H3F3B-212ENST00000592643 GDF11O95390 407 aa14.25□□□□□ -0.13
H3F3B-212ENST00000592643 CENPBP07199 599 aaPredicted RBP14.25□□□□□ -0.13
H3F3B-212ENST00000592643 SDSP20132 328 aa14.25□□□□□ -0.13
H3F3B-212ENST00000592643 GUCY1A2P33402 732 aa14.25□□□□□ -0.13
H3F3B-212ENST00000592643 PPATQ06203 517 aa14.25□□□□□ -0.13
H3F3B-212ENST00000592643 SERPINB13Q9UIV8 391 aa14.25□□□□□ -0.13
H3F3B-212ENST00000592643 MANSC4A6NHS7 340 aaPredicted RBP14.24□□□□□ -0.13
H3F3B-212ENST00000592643 TRIM6-TRIM34B2RNG4 842 aa14.24□□□□□ -0.13
H3F3B-212ENST00000592643 TRPA1O75762 1119 aa14.24□□□□□ -0.13
H3F3B-212ENST00000592643 DGKZQ13574 1117 aa14.24□□□□□ -0.13
H3F3B-212ENST00000592643 IFNL1Q8IU54 200 aa14.24□□□□□ -0.13
H3F3B-212ENST00000592643 FAM43AQ8N2R8 423 aa14.24□□□□□ -0.13
H3F3B-212ENST00000592643 RILPL2Q969X0 211 aa14.24□□□□□ -0.13
H3F3B-212ENST00000592643 TACC3Q9Y6A5 838 aa14.24□□□□□ -0.13
H3F3B-212ENST00000592643 ZHX2Q9Y6X8 837 aa14.24□□□□□ -0.13
H3F3B-212ENST00000592643 NAV1Q8NEY1 1877 aa14.24□□□□□ -0.13
H3F3B-212ENST00000592643 PATL2C9JE40 543 aaKnown RBP14.23□□□□□ -0.13
H3F3B-212ENST00000592643 POLR3DP05423 398 aaPredicted RBP14.23□□□□□ -0.13
H3F3B-212ENST00000592643 HLA-DOAP06340 250 aa14.23□□□□□ -0.13
H3F3B-212ENST00000592643 LBX1P52954 281 aa14.23□□□□□ -0.13
H3F3B-212ENST00000592643 SBK1Q52WX2 424 aa14.23□□□□□ -0.13
H3F3B-212ENST00000592643 GPAT2Q6NUI2 795 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms