RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 AMPD1P23109 780 aa9.23□□□□□ -0.93
VMP1-215ENST00000592619 RASGRF1Q13972 1273 aa9.23□□□□□ -0.93
VMP1-215ENST00000592619 FOXD4L6Q3SYB3 417 aaPredicted RBP9.23□□□□□ -0.93
VMP1-215ENST00000592619 EXOSC6Q5RKV6 272 aaKnown RBP9.23□□□□□ -0.93
VMP1-215ENST00000592619 FOXD4L3Q6VB84 417 aaPredicted RBP9.23□□□□□ -0.93
VMP1-215ENST00000592619 RUFY4Q6ZNE9 571 aa9.23□□□□□ -0.93
VMP1-215ENST00000592619 TTC6Q86TZ1 520 aa9.23□□□□□ -0.93
VMP1-215ENST00000592619 RNPC3Q96LT9 517 aaKnown RBP9.23□□□□□ -0.93
VMP1-215ENST00000592619 WDR18Q9BV38 432 aa9.23□□□□□ -0.93
VMP1-215ENST00000592619 MAPK8IP1Q9UQF2 711 aa9.23□□□□□ -0.93
VMP1-215ENST00000592619 SLC12A7Q9Y666 1083 aa9.23□□□□□ -0.93
VMP1-215ENST00000592619 SLC22A31A6NKX4 558 aa9.22□□□□□ -0.93
VMP1-215ENST00000592619 DCDC2CA8MYV0 355 aa9.22□□□□□ -0.93
VMP1-215ENST00000592619 DDX3YO15523 660 aaKnown RBP9.22□□□□□ -0.93
VMP1-215ENST00000592619 PDPK1O15530 556 aa9.22□□□□□ -0.93
VMP1-215ENST00000592619 PLCG1P19174 1290 aa9.22□□□□□ -0.93
VMP1-215ENST00000592619 DGKGP49619 791 aa9.22□□□□□ -0.93
VMP1-215ENST00000592619 ERVK-24P63145 666 aa9.22□□□□□ -0.93
VMP1-215ENST00000592619 TCEAL1Q15170 157 aa9.22□□□□□ -0.93
VMP1-215ENST00000592619 PPP2R5EQ16537 467 aa9.22□□□□□ -0.93
VMP1-215ENST00000592619 CDCP2Q5VXM1 449 aa9.22□□□□□ -0.93
VMP1-215ENST00000592619 ZNF662Q6ZS27 426 aa9.22□□□□□ -0.93
VMP1-215ENST00000592619 ST7Q9NRC1 585 aa9.22□□□□□ -0.93
VMP1-215ENST00000592619 KCNK4Q9NYG8 393 aa9.22□□□□□ -0.93
VMP1-215ENST00000592619 SBNO2Q9Y2G9 1366 aa9.22□□□□□ -0.93
VMP1-215ENST00000592619 HOXB4P17483 251 aaPredicted RBP9.21□□□□□ -0.94
VMP1-215ENST00000592619 LARP1BQ659C4 914 aaKnown RBP9.21□□□□□ -0.94
VMP1-215ENST00000592619 LYPD4Q6UWN0 246 aa9.21□□□□□ -0.94
VMP1-215ENST00000592619 C12orf40Q86WS4 652 aa9.21□□□□□ -0.94
VMP1-215ENST00000592619 FBXO11Q86XK2 927 aa9.21□□□□□ -0.94
VMP1-215ENST00000592619 MICAL1Q8TDZ2 1067 aa9.21□□□□□ -0.94
VMP1-215ENST00000592619 ATG4CQ96DT6 458 aa9.21□□□□□ -0.94
VMP1-215ENST00000592619 WNT10AQ9GZT5 417 aa9.21□□□□□ -0.94
VMP1-215ENST00000592619 CNNM2Q9H8M5 875 aa9.21□□□□□ -0.94
VMP1-215ENST00000592619 MEGF11A6BM72 1044 aa9.2□□□□□ -0.94
VMP1-215ENST00000592619 CCDC85CA6NKD9 419 aa9.2□□□□□ -0.94
VMP1-215ENST00000592619 DLL1O00548 723 aa9.2□□□□□ -0.94
VMP1-215ENST00000592619 TNFRSF10CO14798 259 aa9.2□□□□□ -0.94
VMP1-215ENST00000592619 CLSTN1O94985 981 aa9.2□□□□□ -0.94
VMP1-215ENST00000592619 NME1P15531 152 aaKnown RBP9.2□□□□□ -0.94
VMP1-215ENST00000592619 GSK3AP49840 483 aa9.2□□□□□ -0.94
VMP1-215ENST00000592619 IFRD2Q12894 506 aaPredicted RBP9.2□□□□□ -0.94
VMP1-215ENST00000592619 OVOS1Q6IE37 1185 aa9.2□□□□□ -0.94
VMP1-215ENST00000592619 NLRC3Q7RTR2 1065 aa9.2□□□□□ -0.94
VMP1-215ENST00000592619 HIF3AQ9Y2N7 669 aa9.2□□□□□ -0.94
VMP1-215ENST00000592619 FANCGO15287 622 aa9.19□□□□□ -0.94
VMP1-215ENST00000592619 DNAJA2O60884 412 aa9.19□□□□□ -0.94
VMP1-215ENST00000592619 GJB6O95452 261 aa9.19□□□□□ -0.94
VMP1-215ENST00000592619 PGRP06401 933 aa9.19□□□□□ -0.94
VMP1-215ENST00000592619 GRK4P32298 578 aa9.19□□□□□ -0.94
VMP1-215ENST00000592619 ID3Q02535 119 aa9.19□□□□□ -0.94
VMP1-215ENST00000592619 KCNMA1Q12791 1236 aa9.19□□□□□ -0.94
VMP1-215ENST00000592619 TRAPPC3LQ5T215 181 aa9.19□□□□□ -0.94
VMP1-215ENST00000592619 DNAJC7Q99615 494 aa9.19□□□□□ -0.94
VMP1-215ENST00000592619 TMPRSS13Q9BYE2 586 aa9.19□□□□□ -0.94
VMP1-215ENST00000592619 RAD18Q9NS91 495 aa9.19□□□□□ -0.94
VMP1-215ENST00000592619 PRAMEF27A3QJZ7 478 aa9.18□□□□□ -0.94
VMP1-215ENST00000592619 ACRP10323 421 aa9.18□□□□□ -0.94
VMP1-215ENST00000592619 DUOXA2Q1HG44 320 aa9.18□□□□□ -0.94
VMP1-215ENST00000592619 FAM178BQ8IXR5 827 aa9.18□□□□□ -0.94
VMP1-215ENST00000592619 FMR1NBQ8N0W7 255 aaPredicted RBP9.18□□□□□ -0.94
VMP1-215ENST00000592619 ZNF669Q96BR6 464 aaPredicted RBP9.18□□□□□ -0.94
VMP1-215ENST00000592619 CRIM1Q9NZV1 1036 aa9.18□□□□□ -0.94
VMP1-215ENST00000592619 A0A0A0MRY4 1105 aa9.17□□□□□ -0.94
VMP1-215ENST00000592619 DDAH1O94760 285 aa9.17□□□□□ -0.94
VMP1-215ENST00000592619 ETF1P62495 437 aaKnown RBP9.17□□□□□ -0.94
VMP1-215ENST00000592619 ZBTB37Q5TC79 503 aa9.17□□□□□ -0.94
VMP1-215ENST00000592619 UNC5AQ6ZN44 842 aa9.17□□□□□ -0.94
VMP1-215ENST00000592619 MCATQ8IVS2 390 aaKnown RBP9.17□□□□□ -0.94
VMP1-215ENST00000592619 LILRB2Q8N423 598 aa9.17□□□□□ -0.94
VMP1-215ENST00000592619 ST13P5Q8NFI4 369 aaPredicted RBP9.17□□□□□ -0.94
VMP1-215ENST00000592619 UBASH3BQ8TF42 649 aa9.17□□□□□ -0.94
VMP1-215ENST00000592619 ACSF2Q96CM8 615 aaPredicted RBP9.17□□□□□ -0.94
VMP1-215ENST00000592619 PHAXQ9H814 394 aaKnown RBP9.17□□□□□ -0.94
VMP1-215ENST00000592619 SUGCTQ9HAC7 445 aa9.17□□□□□ -0.94
VMP1-215ENST00000592619 PPP1R9AQ9ULJ8 1098 aa9.17□□□□□ -0.94
VMP1-215ENST00000592619 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.17□□□□□ -0.94
VMP1-215ENST00000592619 CSADQ9Y600 493 aa9.17□□□□□ -0.94
VMP1-215ENST00000592619 TMPRSS2O15393 492 aa9.16□□□□□ -0.94
VMP1-215ENST00000592619 CHMP4BP1P59074 171 aa9.16□□□□□ -0.94
VMP1-215ENST00000592619 RAC1P63000 192 aa9.16□□□□□ -0.94
VMP1-215ENST00000592619 NCAPHQ15003 741 aa9.16□□□□□ -0.94
VMP1-215ENST00000592619 PLEKHG4Q58EX7 1191 aa9.16□□□□□ -0.94
VMP1-215ENST00000592619 PPM1JQ5JR12 505 aa9.16□□□□□ -0.94
VMP1-215ENST00000592619 C6orf15Q6UXA7 325 aaPredicted RBP9.16□□□□□ -0.94
VMP1-215ENST00000592619 SLFN12Q8IYM2 578 aa9.16□□□□□ -0.94
VMP1-215ENST00000592619 JMYQ8N9B5 988 aa9.16□□□□□ -0.94
VMP1-215ENST00000592619 RNF214Q8ND24 703 aa9.16□□□□□ -0.94
VMP1-215ENST00000592619 SH3TC2Q8TF17 1288 aa9.16□□□□□ -0.94
VMP1-215ENST00000592619 SLC9A7Q96T83 725 aa9.16□□□□□ -0.94
VMP1-215ENST00000592619 LTBP3Q9NS15 1303 aa9.15□□□□□ -0.94
VMP1-215ENST00000592619 UPK3BL1B0FP48 263 aa9.15□□□□□ -0.94
VMP1-215ENST00000592619 CHURC1-FNTBB4DL54 471 aa9.15□□□□□ -0.94
VMP1-215ENST00000592619 UPK3BL2E5RIL1 263 aa9.15□□□□□ -0.94
VMP1-215ENST00000592619 NTF4P34130 210 aa9.15□□□□□ -0.94
VMP1-215ENST00000592619 CCNFP41002 786 aa9.15□□□□□ -0.94
VMP1-215ENST00000592619 ZYXQ15942 572 aaKnown RBP9.15□□□□□ -0.94
VMP1-215ENST00000592619 ARSHQ5FYA8 562 aa9.15□□□□□ -0.94
VMP1-215ENST00000592619 SLC6A19Q695T7 634 aa9.15□□□□□ -0.94
VMP1-215ENST00000592619 MRPL41Q8IXM3 137 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms