RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 ZNF408Q9H9D4 720 aa20.61■□□□□ 0.89
AP3D1-211ENST00000591650 RBM8AQ9Y5S9 174 aaKnown RBP20.61■□□□□ 0.89
AP3D1-211ENST00000591650 HAND2P61296 217 aa20.61■□□□□ 0.89
AP3D1-211ENST00000591650 PPARAQ07869 468 aa20.61■□□□□ 0.89
AP3D1-211ENST00000591650 MIGA2Q7L4E1 593 aa20.61■□□□□ 0.89
AP3D1-211ENST00000591650 TTC6Q86TZ1 520 aa20.61■□□□□ 0.89
AP3D1-211ENST00000591650 AMOTL1Q8IY63 956 aa20.61■□□□□ 0.89
AP3D1-211ENST00000591650 DYNLL2Q96FJ2 89 aa20.61■□□□□ 0.89
AP3D1-211ENST00000591650 NBPF3Q9H094 633 aa20.61■□□□□ 0.89
AP3D1-211ENST00000591650 EHD4Q9H223 541 aa20.61■□□□□ 0.89
AP3D1-211ENST00000591650 PI4KBQ9UBF8 816 aa20.61■□□□□ 0.89
AP3D1-211ENST00000591650 REC8O95072 547 aa20.6■□□□□ 0.89
AP3D1-211ENST00000591650 CELF2O95319 508 aaKnown RBP20.6■□□□□ 0.89
AP3D1-211ENST00000591650 SEC24BO95487 1268 aa20.6■□□□□ 0.89
AP3D1-211ENST00000591650 SUPT20HL1Q3ZLR7 823 aa20.6■□□□□ 0.89
AP3D1-211ENST00000591650 SLC44A5Q8NCS7 719 aa20.6■□□□□ 0.89
AP3D1-211ENST00000591650 U3KPZ7 1027 aaPredicted RBP20.6■□□□□ 0.89
AP3D1-211ENST00000591650 CTDSPL2Q05D32 466 aa20.59■□□□□ 0.89
AP3D1-211ENST00000591650 GABPAQ06546 454 aa20.59■□□□□ 0.89
AP3D1-211ENST00000591650 PRKG1Q13976 671 aa20.59■□□□□ 0.89
AP3D1-211ENST00000591650 METTL16Q86W50 562 aaKnown RBP20.59■□□□□ 0.89
AP3D1-211ENST00000591650 STK11IPQ8N1F8 1099 aa20.59■□□□□ 0.89
AP3D1-211ENST00000591650 SERPINB13Q9UIV8 391 aa20.59■□□□□ 0.89
AP3D1-211ENST00000591650 GREB1LQ9C091 1923 aaPredicted RBP20.59■□□□□ 0.89
AP3D1-211ENST00000591650 NF2P35240 595 aa20.58■□□□□ 0.88
AP3D1-211ENST00000591650 TBC1D10CQ8IV04 446 aa20.58■□□□□ 0.88
AP3D1-211ENST00000591650 CRACR2BQ8N4Y2 399 aaPredicted RBP20.58■□□□□ 0.88
AP3D1-211ENST00000591650 TACC3Q9Y6A5 838 aa20.58■□□□□ 0.88
AP3D1-211ENST00000591650 TAF6LQ9Y6J9 622 aa20.58■□□□□ 0.88
AP3D1-211ENST00000591650 SHMT1P34896 483 aa20.57■□□□□ 0.88
AP3D1-211ENST00000591650 APLP1P51693 650 aa20.57■□□□□ 0.88
AP3D1-211ENST00000591650 DCAF15Q66K64 600 aa20.57■□□□□ 0.88
AP3D1-211ENST00000591650 MOB2Q70IA6 237 aa20.57■□□□□ 0.88
AP3D1-211ENST00000591650 CTNNA3Q9UI47 895 aa20.57■□□□□ 0.88
AP3D1-211ENST00000591650 HERC5Q9UII4 1024 aaKnown RBP20.57■□□□□ 0.88
AP3D1-211ENST00000591650 ANAPC4Q9UJX5 808 aa20.57■□□□□ 0.88
AP3D1-211ENST00000591650 CYP21A2P08686 494 aa20.56■□□□□ 0.88
AP3D1-211ENST00000591650 MAP3K10Q02779 954 aa20.56■□□□□ 0.88
AP3D1-211ENST00000591650 IMMTQ16891 758 aaKnown RBP20.56■□□□□ 0.88
AP3D1-211ENST00000591650 C16orf86Q6ZW13 317 aa20.56■□□□□ 0.88
AP3D1-211ENST00000591650 HOOK2Q96ED9 719 aa20.56■□□□□ 0.88
AP3D1-211ENST00000591650 TRIM34Q9BYJ4 488 aa20.56■□□□□ 0.88
AP3D1-211ENST00000591650 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.56■□□□□ 0.883e-6■■□□□ 13.5
AP3D1-211ENST00000591650 TBC1D12O60347 775 aa20.55■□□□□ 0.88
AP3D1-211ENST00000591650 ZNF341Q9BYN7 854 aa20.55■□□□□ 0.88
AP3D1-211ENST00000591650 PHIPQ8WWQ0 1821 aa20.55■□□□□ 0.88
AP3D1-211ENST00000591650 TMEM88BA6NKF7 163 aa20.54■□□□□ 0.88
AP3D1-211ENST00000591650 PRDM1O75626 825 aa20.54■□□□□ 0.88
AP3D1-211ENST00000591650 CDK8P49336 464 aa20.54■□□□□ 0.88
AP3D1-211ENST00000591650 HTRA3P83110 453 aa20.54■□□□□ 0.88
AP3D1-211ENST00000591650 TTLL12Q14166 644 aaPredicted RBP20.54■□□□□ 0.88
AP3D1-211ENST00000591650 RRP1BQ14684 758 aaKnown RBP20.54■□□□□ 0.88
AP3D1-211ENST00000591650 NECTIN1Q15223 517 aa20.54■□□□□ 0.88
AP3D1-211ENST00000591650 SHROOM1Q2M3G4 852 aaPredicted RBP20.54■□□□□ 0.88
AP3D1-211ENST00000591650 CREB3L3Q68CJ9 461 aa20.54■□□□□ 0.88
AP3D1-211ENST00000591650 FOXP4Q8IVH2 680 aaPredicted RBP20.54■□□□□ 0.88
AP3D1-211ENST00000591650 USP26Q9BXU7 913 aa20.54■□□□□ 0.88
AP3D1-211ENST00000591650 GBA2Q9HCG7 927 aaPredicted RBP20.54■□□□□ 0.88
AP3D1-211ENST00000591650 INCENPQ9NQS7 918 aa20.54■□□□□ 0.88
AP3D1-211ENST00000591650 ANGEL1Q9UNK9 670 aaKnown RBP20.54■□□□□ 0.88
AP3D1-211ENST00000591650 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.54■□□□□ 0.88
AP3D1-211ENST00000591650 NEDD4P46934 1319 aa20.54■□□□□ 0.88
AP3D1-211ENST00000591650 PHF20L1A8MW92 1017 aa20.53■□□□□ 0.88
AP3D1-211ENST00000591650 ZNF213O14771 459 aa20.53■□□□□ 0.88
AP3D1-211ENST00000591650 SLC27A2O14975 620 aa20.53■□□□□ 0.88
AP3D1-211ENST00000591650 USP2O75604 605 aaPredicted RBP20.53■□□□□ 0.88
AP3D1-211ENST00000591650 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.53■□□□□ 0.88
AP3D1-211ENST00000591650 KLRG1Q96E93 195 aa20.53■□□□□ 0.88
AP3D1-211ENST00000591650 WRNIP1Q96S55 665 aa20.53■□□□□ 0.88
AP3D1-211ENST00000591650 SWAP70Q9UH65 585 aa20.53■□□□□ 0.88
AP3D1-211ENST00000591650 PPP1R12BO60237 982 aaPredicted RBP20.53■□□□□ 0.88
AP3D1-211ENST00000591650 HSPA6P17066 643 aa20.53■□□□□ 0.88
AP3D1-211ENST00000591650 INPP5BP32019 993 aa20.53■□□□□ 0.88
AP3D1-211ENST00000591650 TATDN1Q6P1N9 297 aa20.53■□□□□ 0.88
AP3D1-211ENST00000591650 STOX1Q6ZVD7 989 aa20.53■□□□□ 0.88
AP3D1-211ENST00000591650 STAG1Q8WVM7 1258 aa20.53■□□□□ 0.88
AP3D1-211ENST00000591650 ZNF112Q9UJU3 913 aa20.53■□□□□ 0.88
AP3D1-211ENST00000591650 GDF11O95390 407 aa20.52■□□□□ 0.87
AP3D1-211ENST00000591650 SLC3A2P08195 630 aaKnown RBP20.52■□□□□ 0.87
AP3D1-211ENST00000591650 RASA1P20936 1047 aa20.52■□□□□ 0.87
AP3D1-211ENST00000591650 HSPA4P34932 840 aa20.52■□□□□ 0.87
AP3D1-211ENST00000591650 MAP3K11Q16584 847 aa20.52■□□□□ 0.87
AP3D1-211ENST00000591650 AKNAD1Q5T1N1 836 aa20.52■□□□□ 0.87
AP3D1-211ENST00000591650 NKX2-3Q8TAU0 364 aa20.52■□□□□ 0.87
AP3D1-211ENST00000591650 BACH2Q9BYV9 841 aa20.52■□□□□ 0.87
AP3D1-211ENST00000591650 EPB41L2O43491 1005 aaKnown RBP20.51■□□□□ 0.87
AP3D1-211ENST00000591650 IREB2P48200 963 aaKnown RBP20.51■□□□□ 0.87
AP3D1-211ENST00000591650 JAG1P78504 1218 aa20.51■□□□□ 0.87
AP3D1-211ENST00000591650 PDE4BQ07343 736 aa20.51■□□□□ 0.87
AP3D1-211ENST00000591650 RASEFQ8IZ41 740 aa20.51■□□□□ 0.87
AP3D1-211ENST00000591650 C2orf69Q8N8R5 385 aa20.51■□□□□ 0.87
AP3D1-211ENST00000591650 CREBZFQ9NS37 354 aa20.51■□□□□ 0.87
AP3D1-211ENST00000591650 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.51■□□□□ 0.87
AP3D1-211ENST00000591650 TAOK2Q9UL54 1235 aa20.51■□□□□ 0.87
AP3D1-211ENST00000591650 UBE2Q2LH0YL09 131 aa20.5■□□□□ 0.87
AP3D1-211ENST00000591650 ORC4O43929 436 aa20.5■□□□□ 0.87
AP3D1-211ENST00000591650 FGRP09769 529 aa20.5■□□□□ 0.87
AP3D1-211ENST00000591650 AKR1B1P15121 316 aa20.5■□□□□ 0.87
AP3D1-211ENST00000591650 FKBP1BP68106 108 aa20.5■□□□□ 0.87
AP3D1-211ENST00000591650 VGLL4Q14135 290 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms