RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 CYP21A2P08686 494 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 EZRP15311 586 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 SLC8A3P57103 927 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 BEND6Q5SZJ8 279 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 ZNF790Q6PG37 636 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 TTC5Q8N0Z6 440 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 EZH1Q92800 747 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 XAGE2Q96GT9 111 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 PLEKHG4BQ96PX9 1271 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 DDX20Q9UHI6 824 aaKnown RBP13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 MED23Q9ULK4 1368 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 LAMB3Q13751 1172 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 MCMDC2Q4G0Z9 681 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 SPATA21Q7Z572 469 aa13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-217ENST00000591595 A0A087WZG4 1122 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 GBP2P32456 591 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 TXLNAP40222 546 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 USP4Q13107 963 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 RESTQ13127 1097 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 RBM12BQ8IXT5 1001 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 LMBR1Q8WVP7 490 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 KLC4Q9NSK0 619 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 ATP5JP18859 108 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 PPP2R3AQ06190 1150 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 SDF4Q9BRK5 362 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 NPHP4O75161 1426 aaPredicted RBP13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 PES1O00541 588 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 CSB-PGBD3P0DP91 1061 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 RANBP1P43487 201 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 THEMIS2Q5TEJ8 643 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 CHST3Q7LGC8 479 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 HNRNPLLQ8WVV9 542 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 TBC1D5Q92609 795 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 GOLGA1Q92805 767 aa13.85□□□□□ -0.19
SMARCA4-217ENST00000591595 ZSCAN9O15535 394 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-217ENST00000591595 FSBPO95073 299 aa13.84□□□□□ -0.19
SMARCA4-217ENST00000591595 PAX3P23760 479 aa13.84□□□□□ -0.19
SMARCA4-217ENST00000591595 MAP3K9P80192 1104 aa13.84□□□□□ -0.19
SMARCA4-217ENST00000591595 TLDC1Q6P9B6 456 aa13.84□□□□□ -0.19
SMARCA4-217ENST00000591595 ORAI2Q96SN7 254 aa13.84□□□□□ -0.19
SMARCA4-217ENST00000591595 METTL22Q9BUU2 404 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-217ENST00000591595 CENPHQ9H3R5 247 aa13.84□□□□□ -0.19
SMARCA4-217ENST00000591595 NCOA5Q9HCD5 579 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-217ENST00000591595 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMARCA4-217ENST00000591595 PTPDC1A2A3K4 754 aa13.84□□□□□ -0.19
SMARCA4-217ENST00000591595 B4GALNT2Q8NHY0 566 aa13.84□□□□□ -0.19
SMARCA4-217ENST00000591595 STX1AQ16623 288 aa13.83□□□□□ -0.19
SMARCA4-217ENST00000591595 C11orf57Q6ZUT1 292 aaPredicted RBP13.83□□□□□ -0.19
SMARCA4-217ENST00000591595 ARHGEF25Q86VW2 580 aa13.83□□□□□ -0.19
SMARCA4-217ENST00000591595 FSIP1Q8NA03 581 aa13.83□□□□□ -0.19
SMARCA4-217ENST00000591595 OR8K1Q8NGG5 319 aa13.83□□□□□ -0.19
SMARCA4-217ENST00000591595 TCP11Q8WWU5 503 aa13.83□□□□□ -0.19
SMARCA4-217ENST00000591595 MRFAP1Q9Y605 127 aa13.83□□□□□ -0.19
SMARCA4-217ENST00000591595 PXDNQ92626 1479 aa13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 ZNF496Q96IT1 587 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 ATP6V0A4Q9HBG4 840 aa13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 FANCGO15287 622 aa13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 ERLIN1O75477 346 aa13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 CAVIN2O95810 425 aa13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 TPP2P29144 1249 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 PTPN12Q05209 780 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 PDIA6Q15084 440 aa13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 MAB21L3Q8N8X9 362 aa13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 USP28Q96RU2 1077 aa13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 TMEM165Q9HC07 324 aa13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 COPRSQ9NQ92 184 aa13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 SNRKQ9NRH2 765 aa13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 AXIN2Q9Y2T1 843 aa13.83□□□□□ -0.2
SMARCA4-217ENST00000591595 RBM47A0AV96 593 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 RNF40O75150 1001 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 KIAA0754O94854 1291 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 KCNJ6P48051 423 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 FILIP1LQ4L180 1135 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 TRIM65Q6PJ69 517 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 DHX32Q7L7V1 743 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 FMNL2Q96PY5 1086 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 TSGA10Q9BZW7 698 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 ALDH8A1Q9H2A2 487 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 SUGCTQ9HAC7 445 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 L1RE1Q9UN81 338 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 UTYO14607 1347 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 RPSAP08865 295 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 CCDC181Q5TID7 509 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 LMBR1LQ6UX01 489 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 SHTN1A0MZ66 631 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 GOLGA6CA6NDK9 693 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 GOLGA6BA6NDN3 693 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 FMNL1O95466 1100 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 GOLGA6DP0CG33 693 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 RBM43Q6ZSC3 357 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 CEP57L1Q8IYX8 460 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 NUP133Q8WUM0 1156 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 YIPF2Q9BWQ6 316 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 GOLGA6AQ9NYA3 693 aa13.82□□□□□ -0.2
SMARCA4-217ENST00000591595 USPL1Q5W0Q7 1092 aa13.81□□□□□ -0.2
SMARCA4-217ENST00000591595 ANO10Q9NW15 660 aa13.81□□□□□ -0.2
SMARCA4-217ENST00000591595 TIMM10P62072 90 aa13.81□□□□□ -0.2
SMARCA4-217ENST00000591595 NSUN7Q8NE18 718 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-217ENST00000591595 RSRC1Q96IZ7 334 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms