RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 NOP58Q9Y2X3 529 aaKnown RBP7.84□□□□□ -1.15
VPS4B-205ENST00000591383 GPSM3Q9Y4H4 160 aa7.84□□□□□ -1.15
VPS4B-205ENST00000591383 WDR90Q96KV7 1748 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 IRS2Q9Y4H2 1338 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 YDJCA8MPS7 323 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 USP17L15C9J2P7 530 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 USP17L10C9JJH3 530 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 USP17L13C9JLJ4 530 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 USP17L12C9JPN9 530 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 USP17L11C9JVI0 530 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 USP17L21D6R901 530 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 USP17L18D6R9N7 530 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 USP17L22D6RA61 530 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 USP17L17D6RBQ6 530 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 USP17L19D6RCP7 530 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 USP17L20D6RJB6 530 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 RAB11FIP3O75154 756 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 NR1I2O75469 434 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 IFIT2P09913 472 aaKnown RBP7.83□□□□□ -1.16
VPS4B-205ENST00000591383 FGFR2P21802 821 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 HIBADHP31937 336 aaKnown RBP7.83□□□□□ -1.16
VPS4B-205ENST00000591383 PHKA1P46020 1223 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 BCAMP50895 628 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 USP17L24Q0WX57 530 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 HDAC1Q13547 482 aaPredicted RBP7.83□□□□□ -1.16
VPS4B-205ENST00000591383 TTC39AQ5SRH9 613 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 CIAPIN1Q6FI81 312 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 PDXDC2PQ6P474 469 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 CLASRPQ8N2M8 674 aaKnown RBP7.83□□□□□ -1.16
VPS4B-205ENST00000591383 PHTF2Q8N3S3 785 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 DBNDD2Q9BQY9 259 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 OCSTAMPQ9BR26 566 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 CCDC8Q9H0W5 538 aaPredicted RBP7.83□□□□□ -1.16
VPS4B-205ENST00000591383 VPS33BQ9H267 617 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 PCDHB3Q9Y5E6 796 aa7.83□□□□□ -1.16
VPS4B-205ENST00000591383 KDM2BQ8NHM5 1336 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 FAM205CA6NFA0 338 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 FZD9O00144 591 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 PSMD14O00487 310 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 ST18O60284 1047 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 TIMM10P62072 90 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 GTF2IP78347 998 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 PTK2Q05397 1052 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 PTK7Q13308 1070 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 NCOA4Q13772 614 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 SLFNL1Q499Z3 407 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 ADGRD1Q6QNK2 874 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 C15orf52Q6ZUT6 534 aaKnown RBP7.82□□□□□ -1.16
VPS4B-205ENST00000591383 MARVELD3Q96A59 401 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 GCC1Q96CN9 775 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 XAGE2Q96GT9 111 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 GPATCH3Q96I76 525 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 CCDC136Q96JN2 1154 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 CD209Q9NNX6 404 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 EVA1BQ9NVM1 165 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 GNL3LQ9NVN8 582 aaKnown RBP7.82□□□□□ -1.16
VPS4B-205ENST00000591383 DBNLQ9UJU6 430 aaKnown RBP7.82□□□□□ -1.16
VPS4B-205ENST00000591383 HPS5Q9UPZ3 1129 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 SCN4AP35499 1836 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 DOCK2Q92608 1830 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 MYH7P12883 1935 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 AK9Q5TCS8 1911 aa7.82□□□□□ -1.16
VPS4B-205ENST00000591383 SOWAHBA6NEL2 793 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 HRO43593 1189 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 DDNO94850 711 aaPredicted RBP7.81□□□□□ -1.16
VPS4B-205ENST00000591383 IGHDP01880 384 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 CCNYL3P0C7X3 344 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 RASA1P20936 1047 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 GMPSP49915 693 aaPredicted RBP7.81□□□□□ -1.16
VPS4B-205ENST00000591383 MCCD1P59942 119 aaPredicted RBP7.81□□□□□ -1.16
VPS4B-205ENST00000591383 CXCL9Q07325 125 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 RASGRF1Q13972 1273 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 TNIP1Q15025 636 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 ANKRD45Q5TZF3 282 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 TSHZ3Q63HK5 1081 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 CCDC102BQ68D86 513 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 PI16Q6UXB8 463 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 GPC2Q8N158 579 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 ARMC2Q8NEN0 867 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 ANKK1Q8NFD2 765 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 GPKOWQ92917 476 aaPredicted RBP eCLIP7.81□□□□□ -1.16
VPS4B-205ENST00000591383 EAF2Q96CJ1 260 aaPredicted RBP7.81□□□□□ -1.16
VPS4B-205ENST00000591383 FAM84BQ96KN1 310 aaPredicted RBP7.81□□□□□ -1.16
VPS4B-205ENST00000591383 MXD3Q9BW11 206 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 LNPKQ9C0E8 428 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 DCTPP1Q9H773 170 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 GPR108Q9NPR9 543 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 KCNQ5Q9NR82 932 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 AKAP11Q9UKA4 1901 aa7.81□□□□□ -1.16
VPS4B-205ENST00000591383 MYO5AQ9Y4I1 1855 aaKnown RBP7.81□□□□□ -1.16
VPS4B-205ENST00000591383 ECM29Q5VYK3 1845 aa7.8□□□□□ -1.16
VPS4B-205ENST00000591383 F8W031 263 aaPredicted RBP7.8□□□□□ -1.16
VPS4B-205ENST00000591383 LZTS3O60299 673 aaPredicted RBP7.8□□□□□ -1.16
VPS4B-205ENST00000591383 IL1R1P14778 569 aa7.8□□□□□ -1.16
VPS4B-205ENST00000591383 ARID4AP29374 1257 aaPredicted RBP7.8□□□□□ -1.16
VPS4B-205ENST00000591383 KCNH2Q12809 1159 aa7.8□□□□□ -1.16
VPS4B-205ENST00000591383 MSS51Q4VC12 460 aa7.8□□□□□ -1.16
VPS4B-205ENST00000591383 CCDC158Q5M9N0 1113 aa7.8□□□□□ -1.16
VPS4B-205ENST00000591383 MFSD14BQ5SR56 506 aa7.8□□□□□ -1.16
VPS4B-205ENST00000591383 DACT2Q5SW24 774 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms