RNA–Protein interactions for RNA: ENST00000591097.5

CIRBP-231, Transcript of cold inducible RNA binding protein, human

TSL 1 (best)

Gene CIRBP, Length 1,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-231	ENST00000591097	OPTN	Q96CV9	577 aa		28.11	■■■□□ 2.09
CIRBP-231	ENST00000591097	DNAJC18	Q9H819	358 aa		28.11	■■■□□ 2.09
CIRBP-231	ENST00000591097	DCP1A	Q9NPI6	582 aa	Predicted RBP	28.11	■■■□□ 2.09
CIRBP-231	ENST00000591097	HERC5	Q9UII4	1024 aa	Known RBP	28.11	■■■□□ 2.09
CIRBP-231	ENST00000591097	SPDYE5	A6NIY4	337 aa		28.1	■■■□□ 2.09
CIRBP-231	ENST00000591097	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	28.1	■■■□□ 2.09
CIRBP-231	ENST00000591097	ZMYM1	Q5SVZ6	1142 aa		28.09	■■■□□ 2.09
CIRBP-231	ENST00000591097	STRBP	Q96SI9	672 aa	Known RBP	28.09	■■■□□ 2.09
CIRBP-231	ENST00000591097	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	28.09	■■■□□ 2.09	1e-6	■■□□□ 11.4
CIRBP-231	ENST00000591097	NEFL	P07196	543 aa		28.08	■■■□□ 2.09
CIRBP-231	ENST00000591097		M0R2C6	588 aa		28.08	■■■□□ 2.08
CIRBP-231	ENST00000591097	SLC4A8	Q2Y0W8	1093 aa		28.08	■■■□□ 2.08
CIRBP-231	ENST00000591097	CENPQ	Q7L2Z9	268 aa	Predicted RBP	28.08	■■■□□ 2.08
CIRBP-231	ENST00000591097	TICAM2	Q86XR7	235 aa		28.08	■■■□□ 2.08
CIRBP-231	ENST00000591097	ERO1B	Q86YB8	467 aa		28.08	■■■□□ 2.08
CIRBP-231	ENST00000591097	FOXP4	Q8IVH2	680 aa	Predicted RBP	28.08	■■■□□ 2.08
CIRBP-231	ENST00000591097	REM2	Q8IYK8	340 aa	Predicted RBP	28.08	■■■□□ 2.08
CIRBP-231	ENST00000591097	ATP8A2	Q9NTI2	1148 aa		28.08	■■■□□ 2.08
CIRBP-231	ENST00000591097	DOCK1	Q14185	1865 aa		28.07	■■■□□ 2.08
CIRBP-231	ENST00000591097	HLA-DOA	P06340	250 aa		28.07	■■■□□ 2.08
CIRBP-231	ENST00000591097	RRP1B	Q14684	758 aa	Known RBP	28.07	■■■□□ 2.08
CIRBP-231	ENST00000591097	SEC62	Q99442	399 aa	Known RBP	28.07	■■■□□ 2.08
CIRBP-231	ENST00000591097	EHD4	Q9H223	541 aa		28.07	■■■□□ 2.08
CIRBP-231	ENST00000591097	GPAA1	O43292	621 aa		28.06	■■■□□ 2.08
CIRBP-231	ENST00000591097	CTNND1	O60716	968 aa	Known RBP	28.06	■■■□□ 2.08
CIRBP-231	ENST00000591097	PLCD1	P51178	756 aa		28.06	■■■□□ 2.08
CIRBP-231	ENST00000591097	SCYL3	Q8IZE3	742 aa		28.06	■■■□□ 2.08
CIRBP-231	ENST00000591097	OTUD5	Q96G74	571 aa		28.06	■■■□□ 2.08
CIRBP-231	ENST00000591097	MCM9	Q9NXL9	1143 aa		28.06	■■■□□ 2.08
CIRBP-231	ENST00000591097	BAZ2A	Q9UIF9	1905 aa	Known RBP	28.05	■■■□□ 2.08
CIRBP-231	ENST00000591097	TM4SF4	P48230	202 aa		28.05	■■■□□ 2.08
CIRBP-231	ENST00000591097	SLC4A4	Q9Y6R1	1079 aa		28.05	■■■□□ 2.08
CIRBP-231	ENST00000591097	MANSC4	A6NHS7	340 aa	Predicted RBP	28.04	■■■□□ 2.08
CIRBP-231	ENST00000591097	TRIM6-TRIM34	B2RNG4	842 aa		28.04	■■■□□ 2.08
CIRBP-231	ENST00000591097	EVX2	Q03828	476 aa		28.04	■■■□□ 2.08
CIRBP-231	ENST00000591097	TTC6	Q86TZ1	520 aa		28.04	■■■□□ 2.08
CIRBP-231	ENST00000591097	MS4A4A	Q96JQ5	239 aa		28.04	■■■□□ 2.08
CIRBP-231	ENST00000591097	SERPINB13	Q9UIV8	391 aa		28.04	■■■□□ 2.08
CIRBP-231	ENST00000591097	IRF6	O14896	467 aa		28.03	■■■□□ 2.08
CIRBP-231	ENST00000591097	FOXN1	O15353	648 aa		28.03	■■■□□ 2.08
CIRBP-231	ENST00000591097	PPAT	Q06203	517 aa		28.03	■■■□□ 2.08
CIRBP-231	ENST00000591097	PPIL2	Q13356	520 aa		28.03	■■■□□ 2.08
CIRBP-231	ENST00000591097	GSG1L2	A8MUP6	293 aa		28.02	■■■□□ 2.08
CIRBP-231	ENST00000591097	GSPT1	P15170	499 aa	Known RBP	28.02	■■■□□ 2.08
CIRBP-231	ENST00000591097	GABPA	Q06546	454 aa		28.02	■■■□□ 2.08
CIRBP-231	ENST00000591097	SREBF2	Q12772	1141 aa		28.02	■■■□□ 2.08
CIRBP-231	ENST00000591097	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	28.02	■■■□□ 2.08
CIRBP-231	ENST00000591097	TESPA1	A2RU30	521 aa	Predicted RBP	28.02	■■■□□ 2.08
CIRBP-231	ENST00000591097	CAP2	P40123	477 aa		28.02	■■■□□ 2.08
CIRBP-231	ENST00000591097	TTC22	Q5TAA0	569 aa		28.02	■■■□□ 2.08
CIRBP-231	ENST00000591097	RILPL2	Q969X0	211 aa		28.02	■■■□□ 2.08
CIRBP-231	ENST00000591097	POLR3D	P05423	398 aa	Predicted RBP	28.01	■■■□□ 2.07
CIRBP-231	ENST00000591097	CYP2D6	P10635	497 aa		28.01	■■■□□ 2.07
CIRBP-231	ENST00000591097	PTPRA	P18433	802 aa		28.01	■■■□□ 2.07
CIRBP-231	ENST00000591097	INHBE	P58166	350 aa		28.01	■■■□□ 2.07
CIRBP-231	ENST00000591097	TATDN1	Q6P1N9	297 aa		28.01	■■■□□ 2.07
CIRBP-231	ENST00000591097	GIMAP6	Q6P9H5	292 aa		28.01	■■■□□ 2.07
CIRBP-231	ENST00000591097	BEGAIN	Q9BUH8	593 aa		28.01	■■■□□ 2.07
CIRBP-231	ENST00000591097	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	28.01	■■■□□ 2.07
CIRBP-231	ENST00000591097	PICK1	Q9NRD5	415 aa		28.01	■■■□□ 2.07
CIRBP-231	ENST00000591097	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	28.01	■■■□□ 2.07
CIRBP-231	ENST00000591097	PHIP	Q8WWQ0	1821 aa		28.01	■■■□□ 2.07
CIRBP-231	ENST00000591097	ATAD5	Q96QE3	1844 aa		28.01	■■■□□ 2.07
CIRBP-231	ENST00000591097	CA12	O43570	354 aa		28	■■■□□ 2.07
CIRBP-231	ENST00000591097	GNAT2	P19087	354 aa		28	■■■□□ 2.07
CIRBP-231	ENST00000591097	CCDC136	Q96JN2	1154 aa		28	■■■□□ 2.07
CIRBP-231	ENST00000591097	FAM227B	Q96M60	508 aa		28	■■■□□ 2.07
CIRBP-231	ENST00000591097	RNF186	Q9NXI6	227 aa		28	■■■□□ 2.07
CIRBP-231	ENST00000591097	USP17L12	C9JPN9	530 aa		27.99	■■■□□ 2.07
CIRBP-231	ENST00000591097	USP17L21	D6R901	530 aa		27.99	■■■□□ 2.07
CIRBP-231	ENST00000591097	JAG1	P78504	1218 aa		27.99	■■■□□ 2.07
CIRBP-231	ENST00000591097	SAGE1	Q9NXZ1	904 aa		27.99	■■■□□ 2.07
CIRBP-231	ENST00000591097	KCNH4	Q9UQ05	1017 aa		27.99	■■■□□ 2.07
CIRBP-231	ENST00000591097		A0A0D9SFI3	127 aa		27.98	■■■□□ 2.07
CIRBP-231	ENST00000591097	SMIM22	K7EJ46	135 aa		27.98	■■■□□ 2.07
CIRBP-231	ENST00000591097	FOXP2	O15409	715 aa		27.98	■■■□□ 2.07
CIRBP-231	ENST00000591097	GTF2A2	P52657	109 aa		27.98	■■■□□ 2.07
CIRBP-231	ENST00000591097	C12orf60	Q5U649	245 aa		27.98	■■■□□ 2.07
CIRBP-231	ENST00000591097	DDRGK1	Q96HY6	314 aa		27.98	■■■□□ 2.07
CIRBP-231	ENST00000591097	PTPN18	Q99952	460 aa		27.98	■■■□□ 2.07
CIRBP-231	ENST00000591097	TRIM34	Q9BYJ4	488 aa		27.98	■■■□□ 2.07
CIRBP-231	ENST00000591097	HELLS	Q9NRZ9	838 aa		27.98	■■■□□ 2.07
CIRBP-231	ENST00000591097	CYP2D7	A0A087X1C5	515 aa		27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	IGF2BP3	O00425	579 aa	Known RBP eCLIP	27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	SDS	P20132	328 aa		27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	SHMT1	P34896	483 aa		27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	SHROOM1	Q2M3G4	852 aa	Predicted RBP	27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	CTR9	Q6PD62	1173 aa		27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	CCDC129	Q6ZRS4	1044 aa		27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	BRI3BP	Q8WY22	251 aa		27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	ZHX2	Q9Y6X8	837 aa		27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	NMI	Q13287	307 aa	Predicted RBP	27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	SNAPC2	Q13487	334 aa		27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	IFNL1	Q8IU54	200 aa		27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	ARPP21	Q9UBL0	812 aa	Predicted RBP	27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	TAOK2	Q9UL54	1235 aa		27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	AFG3L2	Q9Y4W6	797 aa		27.97	■■■□□ 2.07
CIRBP-231	ENST00000591097	HSPA8	P11142	646 aa	Known RBP	27.96	■■■□□ 2.07
CIRBP-231	ENST00000591097	CCDC84	Q86UT8	332 aa	Predicted RBP	27.96	■■■□□ 2.07
CIRBP-231	ENST00000591097	PATL2	C9JE40	543 aa	Known RBP	27.95	■■■□□ 2.06

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