RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 CCND3P30281 292 aaPredicted RBP15.98■□□□□ 0.15
NEDD4L-227ENST00000590020 SPP2Q13103 211 aa15.98■□□□□ 0.15
NEDD4L-227ENST00000590020 MAP3K21Q5TCX8 1036 aa15.98■□□□□ 0.15
NEDD4L-227ENST00000590020 MAFAQ8NHW3 353 aaPredicted RBP15.98■□□□□ 0.15
NEDD4L-227ENST00000590020 IDI2Q9BXS1 227 aa15.98■□□□□ 0.15
NEDD4L-227ENST00000590020 ASCC2Q9H1I8 757 aaPredicted RBP15.98■□□□□ 0.15
NEDD4L-227ENST00000590020 MYH2Q9UKX2 1941 aa15.98■□□□□ 0.15
NEDD4L-227ENST00000590020 LOC285556D6RIA3 1793 aa15.98■□□□□ 0.15
NEDD4L-227ENST00000590020 GCLCP48506 637 aaPredicted RBP15.97■□□□□ 0.15
NEDD4L-227ENST00000590020 MAP3K10Q02779 954 aa15.97■□□□□ 0.15
NEDD4L-227ENST00000590020 CACNB2Q08289 660 aaPredicted RBP15.97■□□□□ 0.15
NEDD4L-227ENST00000590020 PROCA1Q8NCQ7 364 aaPredicted RBP15.97■□□□□ 0.15
NEDD4L-227ENST00000590020 RAPGEFL1Q9UHV5 662 aa15.97■□□□□ 0.15
NEDD4L-227ENST00000590020 RFX7Q2KHR2 1363 aa15.97■□□□□ 0.15
NEDD4L-227ENST00000590020 UTYO14607 1347 aa15.96■□□□□ 0.15
NEDD4L-227ENST00000590020 CCL14Q16627 93 aa15.96■□□□□ 0.15
NEDD4L-227ENST00000590020 LHX8Q68G74 356 aa15.96■□□□□ 0.15
NEDD4L-227ENST00000590020 MYLIPQ8WY64 445 aa15.96■□□□□ 0.15
NEDD4L-227ENST00000590020 LPIN2Q92539 896 aa15.96■□□□□ 0.15
NEDD4L-227ENST00000590020 ATN1P54259 1190 aaPredicted RBP15.95■□□□□ 0.14
NEDD4L-227ENST00000590020 RRP1BQ14684 758 aaKnown RBP15.95■□□□□ 0.14
NEDD4L-227ENST00000590020 ZNF280CQ8ND82 737 aa15.95■□□□□ 0.14
NEDD4L-227ENST00000590020 LBHD1Q9BQE6 289 aaPredicted RBP15.95■□□□□ 0.14
NEDD4L-227ENST00000590020 SENP6Q9GZR1 1112 aaPredicted RBP15.95■□□□□ 0.14
NEDD4L-227ENST00000590020 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.95■□□□□ 0.14
NEDD4L-227ENST00000590020 TXNRD2Q9NNW7 524 aa15.95■□□□□ 0.14
NEDD4L-227ENST00000590020 ATAD5Q96QE3 1844 aa15.94■□□□□ 0.14
NEDD4L-227ENST00000590020 PRUNE2Q8WUY3 3088 aa15.94■□□□□ 0.14
NEDD4L-227ENST00000590020 EYA2O00167 538 aa15.94■□□□□ 0.14
NEDD4L-227ENST00000590020 ZKSCAN1P17029 563 aaPredicted RBP15.94■□□□□ 0.14
NEDD4L-227ENST00000590020 COL9A1P20849 921 aa15.94■□□□□ 0.14
NEDD4L-227ENST00000590020 BTDP43251 543 aa15.94■□□□□ 0.14
NEDD4L-227ENST00000590020 PHKA1P46020 1223 aa15.94■□□□□ 0.14
NEDD4L-227ENST00000590020 NUDT12Q9BQG2 462 aa15.94■□□□□ 0.14
NEDD4L-227ENST00000590020 SEMA6BQ9H3T3 888 aa15.94■□□□□ 0.14
NEDD4L-227ENST00000590020 GAKO14976 1311 aa15.94■□□□□ 0.14
NEDD4L-227ENST00000590020 MAST2Q6P0Q8 1798 aa15.93■□□□□ 0.14
NEDD4L-227ENST00000590020 RFX5P48382 616 aaPredicted RBP15.93■□□□□ 0.14
NEDD4L-227ENST00000590020 PABPC4Q13310 644 aaKnown RBP eCLIP15.93■□□□□ 0.14
NEDD4L-227ENST00000590020 ATG9AQ7Z3C6 839 aa15.93■□□□□ 0.14
NEDD4L-227ENST00000590020 P2RX7Q99572 595 aaKnown RBP15.93■□□□□ 0.14
NEDD4L-227ENST00000590020 SIL1Q9H173 461 aa15.93■□□□□ 0.14
NEDD4L-227ENST00000590020 MORF4L1Q9UBU8 362 aa15.93■□□□□ 0.14
NEDD4L-227ENST00000590020 FRMPD3Q5JV73 1810 aa15.93■□□□□ 0.14
NEDD4L-227ENST00000590020 SALL1Q9NSC2 1324 aa15.93■□□□□ 0.14
NEDD4L-227ENST00000590020 CDH23Q9H251 3354 aa15.92■□□□□ 0.14
NEDD4L-227ENST00000590020 SHHQ15465 462 aa15.92■□□□□ 0.14
NEDD4L-227ENST00000590020 ATP2B3Q16720 1220 aa15.92■□□□□ 0.14
NEDD4L-227ENST00000590020 NCBP3Q53F19 620 aaKnown RBP15.92■□□□□ 0.14
NEDD4L-227ENST00000590020 C9orf50Q5SZB4 431 aa15.92■□□□□ 0.14
NEDD4L-227ENST00000590020 DZIP1Q86YF9 867 aaKnown RBP15.92■□□□□ 0.14
NEDD4L-227ENST00000590020 TTYH1Q9H313 450 aaPredicted RBP15.92■□□□□ 0.14
NEDD4L-227ENST00000590020 GNL3LQ9NVN8 582 aaKnown RBP15.92■□□□□ 0.14
NEDD4L-227ENST00000590020 ABCF2Q9UG63 623 aa15.92■□□□□ 0.14
NEDD4L-227ENST00000590020 ADORA1P30542 326 aa15.91■□□□□ 0.14
NEDD4L-227ENST00000590020 IRX3P78415 501 aaPredicted RBP15.91■□□□□ 0.14
NEDD4L-227ENST00000590020 MTMR2Q13614 643 aa15.91■□□□□ 0.14
NEDD4L-227ENST00000590020 Q3C1V9 767 aa15.91■□□□□ 0.14
NEDD4L-227ENST00000590020 PORCNQ9H237 461 aa15.91■□□□□ 0.14
NEDD4L-227ENST00000590020 DENND2AQ9ULE3 1009 aa15.91■□□□□ 0.14
NEDD4L-227ENST00000590020 DNAH12Q6ZR08 3092 aa15.91■□□□□ 0.14
NEDD4L-227ENST00000590020 LTBP2Q14767 1821 aa15.91■□□□□ 0.14
NEDD4L-227ENST00000590020 XRCC5P13010 732 aaKnown RBP15.9■□□□□ 0.14
NEDD4L-227ENST00000590020 PDE3AQ14432 1141 aa15.9■□□□□ 0.14
NEDD4L-227ENST00000590020 GPRC5AQ8NFJ5 357 aa15.9■□□□□ 0.14
NEDD4L-227ENST00000590020 SOCS4Q8WXH5 440 aa15.9■□□□□ 0.14
NEDD4L-227ENST00000590020 OSBPL5Q9H0X9 879 aaPredicted RBP15.9■□□□□ 0.14
NEDD4L-227ENST00000590020 NDUFB9Q9Y6M9 179 aa15.9■□□□□ 0.14
NEDD4L-227ENST00000590020 USP17L5A8MUK1 530 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 TBC1D12O60347 775 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 FOSL2P15408 326 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 CAP2P40123 477 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 RHBDL3P58872 404 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 RTP1P59025 263 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 HERVK_113P62684 666 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 SH3D19Q5HYK7 790 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 GPR142Q7Z601 462 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 WDR63Q8IWG1 891 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 USP6NLQ92738 828 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 PAGR1Q9BTK6 254 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 USP44Q9H0E7 712 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 RBPJLQ9UBG7 517 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 PRKAG2Q9UGJ0 569 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 ATP11BQ9Y2G3 1177 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 MROH7-TTC4A0A0A0MT08 1334 aa15.89■□□□□ 0.13
NEDD4L-227ENST00000590020 RGS2P41220 211 aa15.88■□□□□ 0.13
NEDD4L-227ENST00000590020 JAG1P78504 1218 aa15.88■□□□□ 0.13
NEDD4L-227ENST00000590020 SHROOM1Q2M3G4 852 aaPredicted RBP15.88■□□□□ 0.13
NEDD4L-227ENST00000590020 MORN1Q5T089 497 aa15.88■□□□□ 0.13
NEDD4L-227ENST00000590020 POTEEQ6S8J3 1075 aa15.88■□□□□ 0.13
NEDD4L-227ENST00000590020 PRDM5Q9NQX1 630 aaPredicted RBP15.88■□□□□ 0.13
NEDD4L-227ENST00000590020 FLRT1Q9NZU1 646 aa15.88■□□□□ 0.13
NEDD4L-227ENST00000590020 CNGA1P29973 690 aa15.87■□□□□ 0.13
NEDD4L-227ENST00000590020 MAPK4P31152 587 aa15.87■□□□□ 0.13
NEDD4L-227ENST00000590020 MECOMQ03112 1051 aa15.87■□□□□ 0.13
NEDD4L-227ENST00000590020 RASGRF1Q13972 1273 aa15.87■□□□□ 0.13
NEDD4L-227ENST00000590020 CCDC102BQ68D86 513 aa15.87■□□□□ 0.13
NEDD4L-227ENST00000590020 CCAR1Q8IX12 1150 aaKnown RBP15.87■□□□□ 0.13
NEDD4L-227ENST00000590020 TRMT44Q8IYL2 757 aaKnown RBP15.87■□□□□ 0.13
NEDD4L-227ENST00000590020 USP38Q8NB14 1042 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms