RNA–Protein interactions for RNA: ENST00000589353.5

RANBP3-216, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 490 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-216ENST00000589353 NECAB1Q8N987 351 aa11.73□□□□□ -0.53
RANBP3-216ENST00000589353 NAV1Q8NEY1 1877 aa11.73□□□□□ -0.53
RANBP3-216ENST00000589353 IGDCC4Q8TDY8 1250 aa11.73□□□□□ -0.53
RANBP3-216ENST00000589353 ROBO3Q96MS0 1386 aa11.73□□□□□ -0.53
RANBP3-216ENST00000589353 MXD3Q9BW11 206 aa11.73□□□□□ -0.53
RANBP3-216ENST00000589353 DHX36Q9H2U1 1008 aaKnown RBP11.73□□□□□ -0.53
RANBP3-216ENST00000589353 KCNQ5Q9NR82 932 aa11.73□□□□□ -0.53
RANBP3-216ENST00000589353 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.73□□□□□ -0.532e-6■■■□□ 14.9
RANBP3-216ENST00000589353 ATP6V1DQ9Y5K8 247 aa11.73□□□□□ -0.53
RANBP3-216ENST00000589353 SLC12A7Q9Y666 1083 aa11.73□□□□□ -0.53
RANBP3-216ENST00000589353 CCDC196A0A1B0GTZ2 297 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 TSPY2A6NKD2 308 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 GOLGA8BA8MQT2 603 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 PSMD14O00487 310 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 ZBTB43O43298 467 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 RAD17O75943 681 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 CALM1P0DP23 149 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 CALM2P0DP24 149 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 CALM3P0DP25 149 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 RPS12P25398 132 aaKnown RBP11.72□□□□□ -0.53
RANBP3-216ENST00000589353 EIF6P56537 245 aaKnown RBP11.72□□□□□ -0.53
RANBP3-216ENST00000589353 APOBEC3HQ6NTF7 200 aaKnown RBP11.72□□□□□ -0.53
RANBP3-216ENST00000589353 CDC42EP5Q6NZY7 148 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 STK11IPQ8N1F8 1099 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 FAM184AQ8NB25 1140 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 ZSCAN10Q96SZ4 725 aaPredicted RBP11.72□□□□□ -0.53
RANBP3-216ENST00000589353 SWAP70Q9UH65 585 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 SCN9AQ15858 1988 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 ARFGEF1Q9Y6D6 1849 aa11.72□□□□□ -0.53
RANBP3-216ENST00000589353 MYH1P12882 1939 aa11.71□□□□□ -0.53
RANBP3-216ENST00000589353 CYP2D7A0A087X1C5 515 aa11.71□□□□□ -0.53
RANBP3-216ENST00000589353 MYO1BO43795 1136 aa11.71□□□□□ -0.53
RANBP3-216ENST00000589353 METAP2P50579 478 aaKnown RBP eCLIP11.71□□□□□ -0.53
RANBP3-216ENST00000589353 SCRN1Q12765 414 aa11.71□□□□□ -0.53
RANBP3-216ENST00000589353 PICALMQ13492 652 aa11.71□□□□□ -0.53
RANBP3-216ENST00000589353 DLGAP5Q15398 846 aa11.71□□□□□ -0.53
RANBP3-216ENST00000589353 CFAP100Q494V2 611 aa11.71□□□□□ -0.53
RANBP3-216ENST00000589353 PPP4R3BQ5MIZ7 849 aa11.71□□□□□ -0.53
RANBP3-216ENST00000589353 LARP1BQ659C4 914 aaKnown RBP11.71□□□□□ -0.53
RANBP3-216ENST00000589353 C16orf86Q6ZW13 317 aa11.71□□□□□ -0.53
RANBP3-216ENST00000589353 IDI2Q9BXS1 227 aa11.71□□□□□ -0.53
RANBP3-216ENST00000589353 OSBPL5Q9H0X9 879 aaPredicted RBP11.71□□□□□ -0.53
RANBP3-216ENST00000589353 LY9Q9HBG7 655 aa11.71□□□□□ -0.53
RANBP3-216ENST00000589353 SAP30BPQ9UHR5 308 aaKnown RBP11.71□□□□□ -0.53
RANBP3-216ENST00000589353 FOCADQ5VW36 1801 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 TNKSO95271 1327 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 GOLGA8AA7E2F4 631 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 DDX11L8A8MPP1 907 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 NFKBIEO00221 500 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 STX6O43752 255 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 ENTPD3O75355 529 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 BRD1O95696 1058 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 TSPY3P0CV98 308 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 TSPY8P0CW00 308 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 CYP2D6P10635 497 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 CCT2P78371 535 aaKnown RBP11.7□□□□□ -0.54
RANBP3-216ENST00000589353 CXCL9Q07325 125 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 COL9A3Q14050 684 aaPredicted RBP11.7□□□□□ -0.54
RANBP3-216ENST00000589353 NFKBIBQ15653 356 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 IFIT1BQ5T764 474 aaKnown RBP11.7□□□□□ -0.54
RANBP3-216ENST00000589353 APOA5Q6Q788 366 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 CATIPQ7Z7H3 387 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 DGKHQ86XP1 1220 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 RGS22Q8NE09 1264 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 TNPO1Q92973 898 aaKnown RBP11.7□□□□□ -0.54
RANBP3-216ENST00000589353 GMLQ99445 158 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 TRIM34Q9BYJ4 488 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 INCENPQ9NQS7 918 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 TCP11L1Q9NUJ3 509 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 CDK5RAP2Q96SN8 1893 aa11.7□□□□□ -0.54
RANBP3-216ENST00000589353 PRDM1O75626 825 aa11.69□□□□□ -0.54
RANBP3-216ENST00000589353 WDHD1O75717 1129 aaPredicted RBP11.69□□□□□ -0.54
RANBP3-216ENST00000589353 CDK8P49336 464 aa11.69□□□□□ -0.54
RANBP3-216ENST00000589353 TFAP4Q01664 338 aa11.69□□□□□ -0.54
RANBP3-216ENST00000589353 CLEC17AQ6ZS10 378 aa11.69□□□□□ -0.54
RANBP3-216ENST00000589353 MTMR14Q8NCE2 650 aa11.69□□□□□ -0.54
RANBP3-216ENST00000589353 NLGN2Q8NFZ4 835 aa11.69□□□□□ -0.54
RANBP3-216ENST00000589353 SMARCC2Q8TAQ2 1214 aa11.69□□□□□ -0.54
RANBP3-216ENST00000589353 EHD4Q9H223 541 aa11.69□□□□□ -0.54
RANBP3-216ENST00000589353 SERPINB13Q9UIV8 391 aa11.69□□□□□ -0.54
RANBP3-216ENST00000589353 BRPF3Q9ULD4 1205 aa11.69□□□□□ -0.54
RANBP3-216ENST00000589353 TACC3Q9Y6A5 838 aa11.69□□□□□ -0.54
RANBP3-216ENST00000589353 ECM29Q5VYK3 1845 aa11.68□□□□□ -0.54
RANBP3-216ENST00000589353 PTPDC1A2A3K4 754 aa11.68□□□□□ -0.54
RANBP3-216ENST00000589353 H3BQV1 296 aa11.68□□□□□ -0.54
RANBP3-216ENST00000589353 DDAH1O94760 285 aa11.68□□□□□ -0.54
RANBP3-216ENST00000589353 ZSCAN22P10073 491 aaPredicted RBP11.68□□□□□ -0.54
RANBP3-216ENST00000589353 SYT1P21579 422 aa11.68□□□□□ -0.54
RANBP3-216ENST00000589353 PLCD1P51178 756 aa11.68□□□□□ -0.54
RANBP3-216ENST00000589353 ST3GAL1Q11201 340 aa11.68□□□□□ -0.54
RANBP3-216ENST00000589353 SEC23AQ15436 765 aa11.68□□□□□ -0.54
RANBP3-216ENST00000589353 RTN1Q16799 776 aa11.68□□□□□ -0.54
RANBP3-216ENST00000589353 IFFO2Q5TF58 517 aa11.68□□□□□ -0.54
RANBP3-216ENST00000589353 FKBP1CQ5VVH2 108 aa11.68□□□□□ -0.54
RANBP3-216ENST00000589353 ARHGAP27Q6ZUM4 889 aa11.68□□□□□ -0.54
RANBP3-216ENST00000589353 FOXP4Q8IVH2 680 aaPredicted RBP11.68□□□□□ -0.54
RANBP3-216ENST00000589353 ZSCAN29Q8IWY8 852 aaPredicted RBP11.68□□□□□ -0.54
RANBP3-216ENST00000589353 ZNF654Q8IZM8 581 aa11.68□□□□□ -0.54
RANBP3-216ENST00000589353 CRACR2BQ8N4Y2 399 aaPredicted RBP11.68□□□□□ -0.54
RANBP3-216ENST00000589353 NSUN7Q8NE18 718 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms