RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 TRPM4Q8TD43 1214 aa17.14■□□□□ 0.34
NPC1-207ENST00000588867 LRRC2Q9BYS8 371 aa17.14■□□□□ 0.34
NPC1-207ENST00000588867 SCAF8Q9UPN6 1271 aaKnown RBP17.14■□□□□ 0.34
NPC1-207ENST00000588867 ASTN2O75129 1339 aaPredicted RBP17.14■□□□□ 0.33
NPC1-207ENST00000588867 DDTLA6NHG4 134 aaPredicted RBP17.14■□□□□ 0.33
NPC1-207ENST00000588867 KDM4AO75164 1064 aa17.14■□□□□ 0.33
NPC1-207ENST00000588867 MCM5P33992 734 aa17.14■□□□□ 0.33
NPC1-207ENST00000588867 BECN1Q14457 450 aa17.14■□□□□ 0.33
NPC1-207ENST00000588867 HSCBQ8IWL3 235 aa17.14■□□□□ 0.33
NPC1-207ENST00000588867 DHX36Q9H2U1 1008 aaKnown RBP17.14■□□□□ 0.33
NPC1-207ENST00000588867 MKNK2Q9HBH9 465 aa17.14■□□□□ 0.33
NPC1-207ENST00000588867 RANBP6O60518 1105 aaKnown RBP17.13■□□□□ 0.33
NPC1-207ENST00000588867 AK2P54819 239 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 MB21D2Q8IYB1 491 aaPredicted RBP17.13■□□□□ 0.33
NPC1-207ENST00000588867 NKX2-3Q8TAU0 364 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 SNX21Q969T3 373 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 TTC14Q96N46 770 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 LARP6Q9BRS8 491 aaKnown RBP17.13■□□□□ 0.33
NPC1-207ENST00000588867 TBC1D2Q9BYX2 928 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 HACL1Q9UJ83 578 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 PRC1O43663 620 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 PCP11498 1178 aaKnown RBP17.13■□□□□ 0.33
NPC1-207ENST00000588867 EXOSC10Q01780 885 aaKnown RBP17.13■□□□□ 0.33
NPC1-207ENST00000588867 DDX60LQ5H9U9 1706 aaKnown RBP17.13■□□□□ 0.33
NPC1-207ENST00000588867 FKBP1CQ5VVH2 108 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 Q6ZUG5 572 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 CYB5R4Q7L1T6 521 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 SH3BP5LQ7L8J4 393 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 SLC44A5Q8NCS7 719 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 FAM151AQ8WW52 585 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 ESR2Q92731 530 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 ADARB2Q9NS39 739 aaKnown RBP17.13■□□□□ 0.33
NPC1-207ENST00000588867 ZSWIM5Q9P217 1185 aa17.13■□□□□ 0.33
NPC1-207ENST00000588867 DAXXQ9UER7 740 aaPredicted RBP17.13■□□□□ 0.33
NPC1-207ENST00000588867 FGRP09769 529 aa17.12■□□□□ 0.33
NPC1-207ENST00000588867 TNNI2P48788 182 aa17.12■□□□□ 0.33
NPC1-207ENST00000588867 CDK8P49336 464 aa17.12■□□□□ 0.33
NPC1-207ENST00000588867 HIRAP54198 1017 aaPredicted RBP17.12■□□□□ 0.33
NPC1-207ENST00000588867 ZNF287Q9HBT7 754 aa17.12■□□□□ 0.33
NPC1-207ENST00000588867 PI4KBQ9UBF8 816 aa17.12■□□□□ 0.33
NPC1-207ENST00000588867 SERPINB13Q9UIV8 391 aa17.12■□□□□ 0.33
NPC1-207ENST00000588867 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.12■□□□□ 0.33
NPC1-207ENST00000588867 SLC4A3P48751 1232 aa17.11■□□□□ 0.33
NPC1-207ENST00000588867 ANGEL2Q5VTE6 544 aaKnown RBP17.11■□□□□ 0.33
NPC1-207ENST00000588867 C16orf86Q6ZW13 317 aa17.11■□□□□ 0.33
NPC1-207ENST00000588867 ZNF444Q8N0Y2 327 aaPredicted RBP17.11■□□□□ 0.33
NPC1-207ENST00000588867 CRACR2BQ8N4Y2 399 aaPredicted RBP17.11■□□□□ 0.33
NPC1-207ENST00000588867 IL27Q8NEV9 243 aa17.11■□□□□ 0.33
NPC1-207ENST00000588867 L3MBTL3Q96JM7 780 aaPredicted RBP17.11■□□□□ 0.33
NPC1-207ENST00000588867 IPO9Q96P70 1041 aaKnown RBP17.11■□□□□ 0.33
NPC1-207ENST00000588867 TMEM39BQ9GZU3 492 aa17.11■□□□□ 0.33
NPC1-207ENST00000588867 CNTNAP1P78357 1384 aa17.11■□□□□ 0.33
NPC1-207ENST00000588867 ROBO3Q96MS0 1386 aa17.11■□□□□ 0.33
NPC1-207ENST00000588867 ORC4O43929 436 aa17.11■□□□□ 0.33
NPC1-207ENST00000588867 ANTXR2P58335 489 aa17.11■□□□□ 0.33
NPC1-207ENST00000588867 TNFAIP1Q13829 316 aa17.11■□□□□ 0.33
NPC1-207ENST00000588867 FAM47AQ5JRC9 791 aa17.11■□□□□ 0.33
NPC1-207ENST00000588867 FAM83AQ86UY5 434 aa17.11■□□□□ 0.33
NPC1-207ENST00000588867 CSRNP1Q96S65 589 aa17.11■□□□□ 0.33
NPC1-207ENST00000588867 ZKSCAN3Q9BRR0 538 aa17.11■□□□□ 0.33
NPC1-207ENST00000588867 TRIM34Q9BYJ4 488 aa17.11■□□□□ 0.33
NPC1-207ENST00000588867 SLURP2P0DP57 97 aa17.1■□□□□ 0.33
NPC1-207ENST00000588867 RASA3Q14644 834 aa17.1■□□□□ 0.33
NPC1-207ENST00000588867 TSPY2A6NKD2 308 aa17.09■□□□□ 0.33
NPC1-207ENST00000588867 MCM2P49736 904 aa17.09■□□□□ 0.33
NPC1-207ENST00000588867 FOXP4Q8IVH2 680 aaPredicted RBP17.09■□□□□ 0.33
NPC1-207ENST00000588867 K7ELQ4 463 aaPredicted RBP17.09■□□□□ 0.33
NPC1-207ENST00000588867 EPHX2P34913 555 aa17.09■□□□□ 0.33
NPC1-207ENST00000588867 TFAP4Q01664 338 aa17.09■□□□□ 0.33
NPC1-207ENST00000588867 GABPAQ06546 454 aa17.09■□□□□ 0.33
NPC1-207ENST00000588867 TOB2Q14106 344 aaPredicted RBP17.09■□□□□ 0.33
NPC1-207ENST00000588867 ANKRD1Q15327 319 aa17.09■□□□□ 0.33
NPC1-207ENST00000588867 BRF1Q92994 677 aa17.09■□□□□ 0.33
NPC1-207ENST00000588867 EHD4Q9H223 541 aa17.09■□□□□ 0.33
NPC1-207ENST00000588867 ALDH8A1Q9H2A2 487 aaPredicted RBP17.09■□□□□ 0.33
NPC1-207ENST00000588867 GPHNQ9NQX3 736 aaPredicted RBP17.09■□□□□ 0.33
NPC1-207ENST00000588867 GGA3Q9NZ52 723 aa17.09■□□□□ 0.33
NPC1-207ENST00000588867 SWAP70Q9UH65 585 aa17.09■□□□□ 0.33
NPC1-207ENST00000588867 ATRNL1Q5VV63 1379 aa17.08■□□□□ 0.33
NPC1-207ENST00000588867 FAM196BA6NMK8 535 aa17.08■□□□□ 0.33
NPC1-207ENST00000588867 IFIT3O14879 490 aaKnown RBP17.08■□□□□ 0.33
NPC1-207ENST00000588867 RASA1P20936 1047 aa17.08■□□□□ 0.33
NPC1-207ENST00000588867 UBAC1Q9BSL1 405 aa17.08■□□□□ 0.33
NPC1-207ENST00000588867 DEFB129Q9H1M3 183 aa17.08■□□□□ 0.33
NPC1-207ENST00000588867 LIMCH1Q9UPQ0 1083 aa17.08■□□□□ 0.33
NPC1-207ENST00000588867 IQCA1LA6NCM1 817 aa17.08■□□□□ 0.32
NPC1-207ENST00000588867 TSPY3P0CV98 308 aa17.08■□□□□ 0.32
NPC1-207ENST00000588867 TSPY8P0CW00 308 aa17.08■□□□□ 0.32
NPC1-207ENST00000588867 SART3Q15020 963 aaKnown RBP17.08■□□□□ 0.32
NPC1-207ENST00000588867 TMEM67Q5HYA8 995 aa17.08■□□□□ 0.32
NPC1-207ENST00000588867 APOBEC3FQ8IUX4 373 aaKnown RBP17.08■□□□□ 0.32
NPC1-207ENST00000588867 CDAN1Q8IWY9 1227 aa17.08■□□□□ 0.32
NPC1-207ENST00000588867 TMEM87BQ96K49 555 aa17.08■□□□□ 0.32
NPC1-207ENST00000588867 WDR19Q8NEZ3 1342 aa17.07■□□□□ 0.32
NPC1-207ENST00000588867 ERICH2A1L162 156 aa17.07■□□□□ 0.32
NPC1-207ENST00000588867 IQCA1Q86XH1 822 aa17.07■□□□□ 0.32
NPC1-207ENST00000588867 NAP1L2Q9ULW6 460 aaPredicted RBP17.07■□□□□ 0.32
NPC1-207ENST00000588867 APOBRQ0VD83 1088 aa17.06■□□□□ 0.32
NPC1-207ENST00000588867 EAPPQ56P03 285 aaPredicted RBP17.06■□□□□ 0.32
NPC1-207ENST00000588867 USP50Q70EL3 339 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms