RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 AFG3L2Q9Y4W6 797 aa23.43■■□□□ 1.34
CCDC130-209ENST00000588809 NDUFB9Q9Y6M9 179 aa23.43■■□□□ 1.34
CCDC130-209ENST00000588809 ZHX2Q9Y6X8 837 aa23.43■■□□□ 1.34
CCDC130-209ENST00000588809 FLT1P17948 1338 aa23.42■■□□□ 1.34
CCDC130-209ENST00000588809 ADGRA2Q96PE1 1338 aa23.42■■□□□ 1.34
CCDC130-209ENST00000588809 A0A0G2JLL6 359 aaPredicted RBP23.42■■□□□ 1.34
CCDC130-209ENST00000588809 IDH1O75874 414 aaKnown RBP23.42■■□□□ 1.34
CCDC130-209ENST00000588809 MLLT1Q03111 559 aaPredicted RBP23.42■■□□□ 1.34
CCDC130-209ENST00000588809 PRRT2Q7Z6L0 340 aaPredicted RBP23.42■■□□□ 1.34
CCDC130-209ENST00000588809 CERS3Q8IU89 383 aa23.42■■□□□ 1.34
CCDC130-209ENST00000588809 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.42■■□□□ 1.34
CCDC130-209ENST00000588809 ANTXR1Q9H6X2 564 aa23.42■■□□□ 1.34
CCDC130-209ENST00000588809 EFCC1Q9HA90 598 aa23.42■■□□□ 1.34
CCDC130-209ENST00000588809 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.42■■□□□ 1.34
CCDC130-209ENST00000588809 FAM196BA6NMK8 535 aa23.41■■□□□ 1.34
CCDC130-209ENST00000588809 PDHXO00330 501 aa23.41■■□□□ 1.34
CCDC130-209ENST00000588809 CYP7A1P22680 504 aa23.41■■□□□ 1.34
CCDC130-209ENST00000588809 PI4KBQ9UBF8 816 aa23.41■■□□□ 1.34
CCDC130-209ENST00000588809 PTPN22Q9Y2R2 807 aa23.41■■□□□ 1.34
CCDC130-209ENST00000588809 SOX10P56693 466 aa23.4■■□□□ 1.34
CCDC130-209ENST00000588809 MAP3K12Q12852 859 aa23.4■■□□□ 1.34
CCDC130-209ENST00000588809 GPAT2Q6NUI2 795 aa23.4■■□□□ 1.34
CCDC130-209ENST00000588809 C17orf99Q6UX52 265 aa23.4■■□□□ 1.34
CCDC130-209ENST00000588809 METTL16Q86W50 562 aaKnown RBP23.4■■□□□ 1.34
CCDC130-209ENST00000588809 MAGEB6Q8N7X4 407 aa23.4■■□□□ 1.34
CCDC130-209ENST00000588809 TGFBRAP1Q8WUH2 860 aa23.4■■□□□ 1.34
CCDC130-209ENST00000588809 APBB1O00213 710 aa23.39■■□□□ 1.33
CCDC130-209ENST00000588809 ARHGEF6Q15052 776 aa23.39■■□□□ 1.33
CCDC130-209ENST00000588809 TTF1Q15361 905 aaPredicted RBP23.39■■□□□ 1.33
CCDC130-209ENST00000588809 FASTKD5Q7L8L6 764 aaKnown RBP23.39■■□□□ 1.33
CCDC130-209ENST00000588809 MAPKAPK5Q8IW41 473 aa23.39■■□□□ 1.33
CCDC130-209ENST00000588809 MYH8P13535 1937 aa23.39■■□□□ 1.33
CCDC130-209ENST00000588809 IFIT2P09913 472 aaKnown RBP23.38■■□□□ 1.33
CCDC130-209ENST00000588809 CAP2P40123 477 aa23.38■■□□□ 1.33
CCDC130-209ENST00000588809 DYNLL1P63167 89 aaKnown RBP23.38■■□□□ 1.33
CCDC130-209ENST00000588809 LACTBP83111 547 aaPredicted RBP23.38■■□□□ 1.33
CCDC130-209ENST00000588809 SLC45A1Q9Y2W3 748 aa23.38■■□□□ 1.33
CCDC130-209ENST00000588809 RRP1BQ14684 758 aaKnown RBP23.37■■□□□ 1.33
CCDC130-209ENST00000588809 PARK7Q99497 189 aaKnown RBP23.37■■□□□ 1.33
CCDC130-209ENST00000588809 TBC1D2Q9BYX2 928 aa23.37■■□□□ 1.33
CCDC130-209ENST00000588809 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.37■■□□□ 1.33
CCDC130-209ENST00000588809 MIGA1Q8NAN2 632 aa23.36■■□□□ 1.33
CCDC130-209ENST00000588809 DNAJC18Q9H819 358 aa23.36■■□□□ 1.33
CCDC130-209ENST00000588809 PALD1Q9ULE6 856 aa23.36■■□□□ 1.33
CCDC130-209ENST00000588809 DOCK3Q8IZD9 2030 aa23.36■■□□□ 1.33
CCDC130-209ENST00000588809 BAZ2AQ9UIF9 1905 aaKnown RBP23.35■■□□□ 1.33
CCDC130-209ENST00000588809 GNRH1P01148 92 aa23.35■■□□□ 1.33
CCDC130-209ENST00000588809 FOXP4Q8IVH2 680 aaPredicted RBP23.35■■□□□ 1.33
CCDC130-209ENST00000588809 TRIM75PA6NK02 468 aa23.34■■□□□ 1.33
CCDC130-209ENST00000588809 KIF22Q14807 665 aa23.34■■□□□ 1.33
CCDC130-209ENST00000588809 CCDC84Q86UT8 332 aaPredicted RBP23.34■■□□□ 1.33
CCDC130-209ENST00000588809 ARMC5Q96C12 935 aa23.34■■□□□ 1.33
CCDC130-209ENST00000588809 RIOK1Q9BRS2 568 aaKnown RBP23.34■■□□□ 1.33
CCDC130-209ENST00000588809 BCRP11274 1271 aa23.33■■□□□ 1.33
CCDC130-209ENST00000588809 PDE6AP16499 860 aa23.33■■□□□ 1.33
CCDC130-209ENST00000588809 ATP5JP18859 108 aa23.33■■□□□ 1.33
CCDC130-209ENST00000588809 GADL1Q6ZQY3 521 aa23.33■■□□□ 1.33
CCDC130-209ENST00000588809 PROCA1Q8NCQ7 364 aaPredicted RBP23.33■■□□□ 1.33
CCDC130-209ENST00000588809 ZNF280CQ8ND82 737 aa23.33■■□□□ 1.33
CCDC130-209ENST00000588809 LRRCC1Q9C099 1032 aa23.33■■□□□ 1.33
CCDC130-209ENST00000588809 ARHGAP39Q9C0H5 1083 aa23.33■■□□□ 1.33
CCDC130-209ENST00000588809 CPA4Q9UI42 421 aa23.33■■□□□ 1.33
CCDC130-209ENST00000588809 USP17L5A8MUK1 530 aa23.32■■□□□ 1.32
CCDC130-209ENST00000588809 GOLIM4O00461 696 aa23.32■■□□□ 1.32
CCDC130-209ENST00000588809 HLA-DOAP06340 250 aa23.32■■□□□ 1.32
CCDC130-209ENST00000588809 ASNSP08243 561 aa23.32■■□□□ 1.32
CCDC130-209ENST00000588809 CYP2C8P10632 490 aa23.32■■□□□ 1.32
CCDC130-209ENST00000588809 SLC9C2Q5TAH2 1124 aa23.32■■□□□ 1.32
CCDC130-209ENST00000588809 GINM1Q9NU53 330 aa23.32■■□□□ 1.32
CCDC130-209ENST00000588809 SAP30BPQ9UHR5 308 aaKnown RBP23.32■■□□□ 1.32
CCDC130-209ENST00000588809 AGTPBP1Q9UPW5 1226 aa23.32■■□□□ 1.32
CCDC130-209ENST00000588809 TCRBV5S4A2TA0A5A2 114 aa23.31■■□□□ 1.32
CCDC130-209ENST00000588809 PRMT2P55345 433 aa23.31■■□□□ 1.32
CCDC130-209ENST00000588809 SPP2Q13103 211 aa23.31■■□□□ 1.32
CCDC130-209ENST00000588809 CRACR2BQ8N4Y2 399 aaPredicted RBP23.31■■□□□ 1.32
CCDC130-209ENST00000588809 DNAJC2Q99543 621 aaKnown RBP23.31■■□□□ 1.32
CCDC130-209ENST00000588809 EHD4Q9H223 541 aa23.31■■□□□ 1.32
CCDC130-209ENST00000588809 PAG1Q9NWQ8 432 aa23.31■■□□□ 1.32
CCDC130-209ENST00000588809 CTGFP29279 349 aa23.3■■□□□ 1.32
CCDC130-209ENST00000588809 USP5P45974 858 aa23.3■■□□□ 1.32
CCDC130-209ENST00000588809 HAUS7Q99871 368 aa23.3■■□□□ 1.32
CCDC130-209ENST00000588809 WDR18Q9BV38 432 aa23.3■■□□□ 1.32
CCDC130-209ENST00000588809 DCTPP1Q9H773 170 aa23.3■■□□□ 1.32
CCDC130-209ENST00000588809 PTCH2Q9Y6C5 1203 aa23.3■■□□□ 1.32
CCDC130-209ENST00000588809 MAGEB6P1A0A0J9YX57 407 aa23.29■■□□□ 1.32
CCDC130-209ENST00000588809 JAG1P78504 1218 aa23.29■■□□□ 1.32
CCDC130-209ENST00000588809 SH3D19Q5HYK7 790 aa23.29■■□□□ 1.32
CCDC130-209ENST00000588809 EDC3Q96F86 508 aaKnown RBP23.29■■□□□ 1.32
CCDC130-209ENST00000588809 TRIM47Q96LD4 638 aa23.29■■□□□ 1.32
CCDC130-209ENST00000588809 TRIM34Q9BYJ4 488 aa23.29■■□□□ 1.32
CCDC130-209ENST00000588809 AS3MTQ9HBK9 375 aa23.29■■□□□ 1.32
CCDC130-209ENST00000588809 ZNF532Q9HCE3 1301 aa23.29■■□□□ 1.32
CCDC130-209ENST00000588809 PSMC4P43686 418 aa23.28■■□□□ 1.32
CCDC130-209ENST00000588809 TREML2Q5T2D2 321 aa23.28■■□□□ 1.32
CCDC130-209ENST00000588809 TATDN1Q6P1N9 297 aa23.28■■□□□ 1.32
CCDC130-209ENST00000588809 ZNF333Q96JL9 665 aa23.28■■□□□ 1.32
CCDC130-209ENST00000588809 BOLA2Q9H3K6 86 aa23.28■■□□□ 1.32
CCDC130-209ENST00000588809 SERPINB13Q9UIV8 391 aa23.28■■□□□ 1.32
CCDC130-209ENST00000588809 HMGCS2P54868 508 aa23.27■■□□□ 1.32
CCDC130-209ENST00000588809 RRP1P56182 461 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms