RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 TBC1D7Q9P0N9 293 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 RTEL1-TNFRSF6BF6WH68 1400 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 TARSL2A2RTX5 802 aaKnown RBP8.7□□□□□ -1.02
LAMA3-210ENST00000588770 N4BP3O15049 544 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 MARCH6O60337 910 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 TRIM27P14373 513 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 CDC25CP30307 473 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 KLC1Q07866 573 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 SOGA3Q5TF21 947 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 GDAP1L1Q96MZ0 367 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 IFNKQ9P0W0 207 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 SEL1LQ9UBV2 794 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 R3HDM2Q9Y2K5 976 aaKnown RBP8.7□□□□□ -1.02
LAMA3-210ENST00000588770 THOC2Q8NI27 1593 aaKnown RBP8.7□□□□□ -1.02
LAMA3-210ENST00000588770 KDM1AO60341 852 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 LDHAP00338 332 aaKnown RBP8.7□□□□□ -1.02
LAMA3-210ENST00000588770 MYCLP1P12525 358 aaPredicted RBP8.7□□□□□ -1.02
LAMA3-210ENST00000588770 ATP5JP18859 108 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 USP5P45974 858 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 CCZ1BP86790 482 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 CCZ1P86791 482 aaPredicted RBP8.7□□□□□ -1.02
LAMA3-210ENST00000588770 STK38Q15208 465 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 CCDC93Q567U6 631 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 BEND6Q5SZJ8 279 aaPredicted RBP8.7□□□□□ -1.02
LAMA3-210ENST00000588770 NBPF14Q5TI25 921 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 STAMBPL1Q96FJ0 436 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 GMNNO75496 209 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 PSME1Q06323 249 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 POTEEQ6S8J3 1075 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 MTHFD1LQ6UB35 978 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 MAP7D3Q8IWC1 876 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 SMC1BQ8NDV3 1235 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 CARD8Q9Y2G2 431 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 CYP46A1Q9Y6A2 500 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 BLMP54132 1417 aaPredicted RBP8.69□□□□□ -1.02
LAMA3-210ENST00000588770 ARHGAP31Q2M1Z3 1444 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 SPECC1L-ADORA2AF8WAN1 911 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 LIN7AO14910 233 aaPredicted RBP8.69□□□□□ -1.02
LAMA3-210ENST00000588770 TBCAO75347 108 aaKnown RBP8.69□□□□□ -1.02
LAMA3-210ENST00000588770 PDHA1P08559 390 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 MTHFSP49914 203 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 PDCLQ13371 301 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 RPGRIP1Q96KN7 1286 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 FTOQ9C0B1 505 aaKnown RBP eCLIP8.69□□□□□ -1.02
LAMA3-210ENST00000588770 EVI5O60447 810 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 MAP4K4O95819 1239 aaPredicted RBP8.69□□□□□ -1.02
LAMA3-210ENST00000588770 CCDC6Q16204 474 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 TRIM50Q86XT4 487 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 TMEM87AQ8NBN3 555 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 ZWILCHQ9H900 591 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 BIN1O00499 593 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 POSTNQ15063 836 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 DHX58Q96C10 678 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 CLMNQ96JQ2 1002 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 MRGBPQ9NV56 204 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 CHMP2BQ9UQN3 213 aa8.69□□□□□ -1.02
LAMA3-210ENST00000588770 HFM1A2PYH4 1435 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 VIRMAQ69YN4 1812 aaKnown RBP8.68□□□□□ -1.02
LAMA3-210ENST00000588770 SMNDC1O75940 238 aaKnown RBP eCLIP8.68□□□□□ -1.02
LAMA3-210ENST00000588770 SLC4A2P04920 1241 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 HARSP12081 509 aaKnown RBP8.68□□□□□ -1.02
LAMA3-210ENST00000588770 STIP1P31948 543 aaKnown RBP8.68□□□□□ -1.02
LAMA3-210ENST00000588770 E4F1Q66K89 784 aaPredicted RBP8.68□□□□□ -1.02
LAMA3-210ENST00000588770 EIF2AQ9BY44 585 aaKnown RBP8.68□□□□□ -1.02
LAMA3-210ENST00000588770 ARHGEF10LQ9HCE6 1279 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 PPANQ9NQ55 473 aaKnown RBP8.68□□□□□ -1.02
LAMA3-210ENST00000588770 EID1Q9Y6B2 187 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 MSL3P1P0C860 447 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 TMCO4Q5TGY1 634 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 FUKQ8N0W3 1084 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 CCDC110Q8TBZ0 833 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 ZFAND2BQ8WV99 257 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 VIPAS39Q9H9C1 493 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 TMEM98Q9Y2Y6 226 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 ARIH1Q9Y4X5 557 aaPredicted RBP8.68□□□□□ -1.02
LAMA3-210ENST00000588770 SYNRGQ9UMZ2 1314 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 ARHGAP6O43182 974 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 GNAT2P19087 354 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 GUCY2FP51841 1108 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 NME8Q8N427 588 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 RNF10Q8N5U6 811 aaKnown RBP8.68□□□□□ -1.02
LAMA3-210ENST00000588770 ABHD8Q96I13 439 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 CLSTN2Q9H4D0 955 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 GPCPD1Q9NPB8 672 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 C6orf203Q9P0P8 240 aaPredicted RBP8.68□□□□□ -1.02
LAMA3-210ENST00000588770 NPHP3Q7Z494 1330 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 TMEM232C9JQI7 657 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 TPPPO94811 219 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 ZNF202O95125 648 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 RAPGEF3O95398 923 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 GGCXP38435 758 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 ZNF569Q5MCW4 686 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 LEO1Q8WVC0 666 aaPredicted RBP8.68□□□□□ -1.02
LAMA3-210ENST00000588770 ARHGAP45Q92619 1136 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 CDK5RAP3Q96JB5 506 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 MAK16Q9BXY0 300 aaKnown RBP8.68□□□□□ -1.02
LAMA3-210ENST00000588770 NDEL1Q9GZM8 345 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 SEPT10Q9P0V9 454 aa8.68□□□□□ -1.02
LAMA3-210ENST00000588770 SUCLA2Q9P2R7 463 aaPredicted RBP8.68□□□□□ -1.02
LAMA3-210ENST00000588770 L1RE1Q9UN81 338 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms