RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 PICK1Q9NRD5 415 aa12.2□□□□□ -0.46
TPM4-207ENST00000588032 DOCK2Q92608 1830 aa12.2□□□□□ -0.46
TPM4-207ENST00000588032 GJA5P36382 358 aa12.19□□□□□ -0.46
TPM4-207ENST00000588032 PDE1AP54750 535 aa12.19□□□□□ -0.46
TPM4-207ENST00000588032 NUCB1Q02818 461 aa12.19□□□□□ -0.46
TPM4-207ENST00000588032 PPIL2Q13356 520 aa12.19□□□□□ -0.46
TPM4-207ENST00000588032 TICAM2Q86XR7 235 aa12.19□□□□□ -0.46
TPM4-207ENST00000588032 IFNL1Q8IU54 200 aa12.19□□□□□ -0.46
TPM4-207ENST00000588032 SCYL3Q8IZE3 742 aa12.19□□□□□ -0.46
TPM4-207ENST00000588032 OTUD7AQ8TE49 926 aaPredicted RBP12.19□□□□□ -0.46
TPM4-207ENST00000588032 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
TPM4-207ENST00000588032 MS4A4AQ96JQ5 239 aa12.19□□□□□ -0.46
TPM4-207ENST00000588032 CFHR5Q9BXR6 569 aa12.19□□□□□ -0.46
TPM4-207ENST00000588032 TRIM34Q9BYJ4 488 aa12.19□□□□□ -0.46
TPM4-207ENST00000588032 TAOK2Q9UL54 1235 aa12.19□□□□□ -0.46
TPM4-207ENST00000588032 PALD1Q9ULE6 856 aa12.19□□□□□ -0.46
TPM4-207ENST00000588032 RNF113AO15541 343 aaKnown RBP12.18□□□□□ -0.46
TPM4-207ENST00000588032 CETPP11597 493 aa12.18□□□□□ -0.46
TPM4-207ENST00000588032 IRX6P78412 446 aaPredicted RBP12.18□□□□□ -0.46
TPM4-207ENST00000588032 SNAPC2Q13487 334 aa12.18□□□□□ -0.46
TPM4-207ENST00000588032 NOM1Q5C9Z4 860 aaKnown RBP12.18□□□□□ -0.46
TPM4-207ENST00000588032 TSHZ3Q63HK5 1081 aa12.18□□□□□ -0.46
TPM4-207ENST00000588032 B4GALNT3Q6L9W6 998 aa12.18□□□□□ -0.46
TPM4-207ENST00000588032 CRACR2BQ8N4Y2 399 aaPredicted RBP12.18□□□□□ -0.46
TPM4-207ENST00000588032 DDRGK1Q96HY6 314 aa12.18□□□□□ -0.46
TPM4-207ENST00000588032 TBC1D2Q9BYX2 928 aa12.18□□□□□ -0.46
TPM4-207ENST00000588032 LNPKQ9C0E8 428 aa12.18□□□□□ -0.46
TPM4-207ENST00000588032 EHD4Q9H223 541 aa12.18□□□□□ -0.46
TPM4-207ENST00000588032 ATP8A2Q9NTI2 1148 aa12.18□□□□□ -0.46
TPM4-207ENST00000588032 GINM1Q9NU53 330 aa12.18□□□□□ -0.46
TPM4-207ENST00000588032 MYO5AQ9Y4I1 1855 aaKnown RBP12.18□□□□□ -0.46
TPM4-207ENST00000588032 CEP350Q5VT06 3117 aa12.17□□□□□ -0.46
TPM4-207ENST00000588032 AK9Q5TCS8 1911 aa12.17□□□□□ -0.46
TPM4-207ENST00000588032 CXCL11O14625 94 aa12.17□□□□□ -0.46
TPM4-207ENST00000588032 IRF6O14896 467 aa12.17□□□□□ -0.46
TPM4-207ENST00000588032 POLR3DP05423 398 aaPredicted RBP12.17□□□□□ -0.46
TPM4-207ENST00000588032 PTPRAP18433 802 aa12.17□□□□□ -0.46
TPM4-207ENST00000588032 CAP2P40123 477 aa12.17□□□□□ -0.46
TPM4-207ENST00000588032 LCORLQ8N3X6 602 aa12.17□□□□□ -0.46
TPM4-207ENST00000588032 APPBP2Q92624 585 aa12.17□□□□□ -0.46
TPM4-207ENST00000588032 EVI5LQ96CN4 794 aa12.17□□□□□ -0.46
TPM4-207ENST00000588032 OSBPL3Q9H4L5 887 aa12.17□□□□□ -0.46
TPM4-207ENST00000588032 ZCCHC17Q9NP64 241 aaKnown RBP12.17□□□□□ -0.46
TPM4-207ENST00000588032 SAP30BPQ9UHR5 308 aaKnown RBP12.17□□□□□ -0.46
TPM4-207ENST00000588032 KCNH4Q9UQ05 1017 aa12.17□□□□□ -0.46
TPM4-207ENST00000588032 CCL15-CCL14A0A0B4J2E2 113 aa12.16□□□□□ -0.46
TPM4-207ENST00000588032 MBD4O95243 580 aa12.16□□□□□ -0.46
TPM4-207ENST00000588032 CCL15Q16663 113 aa12.16□□□□□ -0.46
TPM4-207ENST00000588032 AMOTL1Q8IY63 956 aa12.16□□□□□ -0.46
TPM4-207ENST00000588032 FSD1Q9BTV5 496 aa12.16□□□□□ -0.46
TPM4-207ENST00000588032 PUS7LQ9H0K6 701 aaKnown RBP12.16□□□□□ -0.46
TPM4-207ENST00000588032 ARMT1Q9H993 441 aa12.16□□□□□ -0.46
TPM4-207ENST00000588032 DCP1AQ9NPI6 582 aaPredicted RBP12.16□□□□□ -0.46
TPM4-207ENST00000588032 MCM9Q9NXL9 1143 aa12.16□□□□□ -0.46
TPM4-207ENST00000588032 SERPINB13Q9UIV8 391 aa12.16□□□□□ -0.46
TPM4-207ENST00000588032 TSKSQ9UJT2 592 aa12.16□□□□□ -0.46
TPM4-207ENST00000588032 ZHX2Q9Y6X8 837 aa12.16□□□□□ -0.46
TPM4-207ENST00000588032 U3KPZ7 1027 aaPredicted RBP12.16□□□□□ -0.46
TPM4-207ENST00000588032 IGF2BP3O00425 579 aaKnown RBP eCLIP12.15□□□□□ -0.46
TPM4-207ENST00000588032 ASNSP08243 561 aa12.15□□□□□ -0.46
TPM4-207ENST00000588032 GNAT2P19087 354 aa12.15□□□□□ -0.46
TPM4-207ENST00000588032 COL13A1Q5TAT6 717 aaPredicted RBP12.15□□□□□ -0.46
TPM4-207ENST00000588032 TATDN1Q6P1N9 297 aa12.15□□□□□ -0.46
TPM4-207ENST00000588032 GIMAP6Q6P9H5 292 aa12.15□□□□□ -0.46
TPM4-207ENST00000588032 SDR42E1Q8WUS8 393 aa12.15□□□□□ -0.46
TPM4-207ENST00000588032 BRI3BPQ8WY22 251 aa12.15□□□□□ -0.46
TPM4-207ENST00000588032 STRBPQ96SI9 672 aaKnown RBP12.15□□□□□ -0.46
TPM4-207ENST00000588032 PTPN18Q99952 460 aa12.15□□□□□ -0.46
TPM4-207ENST00000588032 AFG3L2Q9Y4W6 797 aa12.15□□□□□ -0.46
TPM4-207ENST00000588032 SLC4A4Q9Y6R1 1079 aa12.15□□□□□ -0.46
TPM4-207ENST00000588032 OTOFQ9HC10 1997 aa12.15□□□□□ -0.46
TPM4-207ENST00000588032 FAM196BA6NMK8 535 aa12.14□□□□□ -0.47
TPM4-207ENST00000588032 USP17L5A8MUK1 530 aa12.14□□□□□ -0.47
TPM4-207ENST00000588032 TBC1D8O95759 1140 aa12.14□□□□□ -0.47
TPM4-207ENST00000588032 SLFNL1Q499Z3 407 aa12.14□□□□□ -0.47
TPM4-207ENST00000588032 FASTKD5Q7L8L6 764 aaKnown RBP12.14□□□□□ -0.47
TPM4-207ENST00000588032 PLEKHM2Q8IWE5 1019 aa12.14□□□□□ -0.47
TPM4-207ENST00000588032 OSBP2Q969R2 916 aa12.14□□□□□ -0.47
TPM4-207ENST00000588032 AS3MTQ9HBK9 375 aa12.14□□□□□ -0.47
TPM4-207ENST00000588032 FOCADQ5VW36 1801 aa12.14□□□□□ -0.47
TPM4-207ENST00000588032 GPR25O00155 361 aa12.13□□□□□ -0.47
TPM4-207ENST00000588032 PRKAB2O43741 272 aa12.13□□□□□ -0.47
TPM4-207ENST00000588032 SLURP2P0DP57 97 aa12.13□□□□□ -0.47
TPM4-207ENST00000588032 PLCD1P51178 756 aa12.13□□□□□ -0.47
TPM4-207ENST00000588032 ZMYM1Q5SVZ6 1142 aa12.13□□□□□ -0.47
TPM4-207ENST00000588032 ANKRD23Q86SG2 305 aa12.13□□□□□ -0.47
TPM4-207ENST00000588032 ZNF280CQ8ND82 737 aa12.13□□□□□ -0.47
TPM4-207ENST00000588032 DNAJC18Q9H819 358 aa12.13□□□□□ -0.47
TPM4-207ENST00000588032 ZFYVE28Q9HCC9 887 aa12.13□□□□□ -0.47
TPM4-207ENST00000588032 SWAP70Q9UH65 585 aa12.13□□□□□ -0.47
TPM4-207ENST00000588032 LAMB1P07942 1786 aa12.13□□□□□ -0.47
TPM4-207ENST00000588032 A0A0G2JLL6 359 aaPredicted RBP12.12□□□□□ -0.47
TPM4-207ENST00000588032 PATL2C9JE40 543 aaKnown RBP12.12□□□□□ -0.47
TPM4-207ENST00000588032 BTBD19C9JJ37 291 aa12.12□□□□□ -0.47
TPM4-207ENST00000588032 USP17L12C9JPN9 530 aa12.12□□□□□ -0.47
TPM4-207ENST00000588032 USP17L21D6R901 530 aa12.12□□□□□ -0.47
TPM4-207ENST00000588032 GPAA1O43292 621 aa12.12□□□□□ -0.47
TPM4-207ENST00000588032 CHGBP05060 677 aa12.12□□□□□ -0.47
TPM4-207ENST00000588032 GABPAQ06546 454 aa12.12□□□□□ -0.47
TPM4-207ENST00000588032 RRP1BQ14684 758 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms