RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 TLR7Q9NYK1 1049 aaKnown RBP10.3□□□□□ -0.76
NEDD4L-218ENST00000587547 LEMD3Q9Y2U8 911 aa10.3□□□□□ -0.76
NEDD4L-218ENST00000587547 ZNF646O15015 1829 aaPredicted RBP10.29□□□□□ -0.76
NEDD4L-218ENST00000587547 FGFR2P21802 821 aa10.29□□□□□ -0.76
NEDD4L-218ENST00000587547 SKAP1Q86WV1 359 aa10.29□□□□□ -0.76
NEDD4L-218ENST00000587547 OTUD7AQ8TE49 926 aaPredicted RBP10.29□□□□□ -0.76
NEDD4L-218ENST00000587547 LPIN2Q92539 896 aa10.29□□□□□ -0.76
NEDD4L-218ENST00000587547 XAGE2Q96GT9 111 aa10.29□□□□□ -0.76
NEDD4L-218ENST00000587547 DBNDD2Q9BQY9 259 aa10.29□□□□□ -0.76
NEDD4L-218ENST00000587547 COL25A1Q9BXS0 654 aaPredicted RBP10.29□□□□□ -0.76
NEDD4L-218ENST00000587547 GPR108Q9NPR9 543 aa10.29□□□□□ -0.76
NEDD4L-218ENST00000587547 MYH2Q9UKX2 1941 aa10.29□□□□□ -0.76
NEDD4L-218ENST00000587547 NUDT7P0C024 238 aa10.28□□□□□ -0.76
NEDD4L-218ENST00000587547 GYG1P46976 350 aa10.28□□□□□ -0.76
NEDD4L-218ENST00000587547 MAP3K11Q16584 847 aa10.28□□□□□ -0.76
NEDD4L-218ENST00000587547 DACT2Q5SW24 774 aa10.28□□□□□ -0.76
NEDD4L-218ENST00000587547 TXNRD3Q86VQ6 643 aa10.28□□□□□ -0.76
NEDD4L-218ENST00000587547 VPS37DQ86XT2 251 aa10.28□□□□□ -0.76
NEDD4L-218ENST00000587547 APOBEC3FQ8IUX4 373 aaKnown RBP10.28□□□□□ -0.76
NEDD4L-218ENST00000587547 HOMEZQ8IX15 550 aa10.28□□□□□ -0.76
NEDD4L-218ENST00000587547 KHSRPQ92945 711 aaKnown RBP eCLIP10.28□□□□□ -0.76
NEDD4L-218ENST00000587547 DBNLQ9UJU6 430 aaKnown RBP10.28□□□□□ -0.76
NEDD4L-218ENST00000587547 LAMB1P07942 1786 aa10.28□□□□□ -0.76
NEDD4L-218ENST00000587547 DOCK2Q92608 1830 aa10.28□□□□□ -0.76
NEDD4L-218ENST00000587547 MED23Q9ULK4 1368 aa10.27□□□□□ -0.76
NEDD4L-218ENST00000587547 UNC80Q8N2C7 3258 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 HOXB3P14651 431 aaPredicted RBP10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 RGS3P49796 1198 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 BCAMP50895 628 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 MTFR1Q15390 333 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 CAVIN4Q5BKX8 364 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 ARSIQ5FYB1 569 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 TTC39AQ5SRH9 613 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 C6orf132Q5T0Z8 1188 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 TSHZ3Q63HK5 1081 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 ZNF804AQ7Z570 1209 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 PODNQ7Z5L7 613 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 UBE2Q1Q7Z7E8 422 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 ZNF454Q8N9F8 522 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 GPATCH3Q96I76 525 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 ARHGAP39Q9C0H5 1083 aa10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 IQSEC3Q9UPP2 1182 aaPredicted RBP10.27□□□□□ -0.77
NEDD4L-218ENST00000587547 ZSWIM8A7E2V4 1837 aa10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 POTEB2H3BUK9 544 aa10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 MX1P20591 662 aa10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 HIBADHP31937 336 aaKnown RBP10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 PHKA1P46020 1223 aa10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 CCDC158Q5M9N0 1113 aa10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 OTUD7BQ6GQQ9 843 aa10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 Q7L0L9 218 aa10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 OGFOD1Q8N543 542 aa10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 ZDHHC16Q969W1 377 aa10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 ZBED3Q96IU2 234 aaPredicted RBP10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 FAM84BQ96KN1 310 aaPredicted RBP10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 PHOX2BQ99453 314 aa10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 TMUB1Q9BVT8 246 aa10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 DEFB129Q9H1M3 183 aa10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 IRS2Q9Y4H2 1338 aa10.26□□□□□ -0.77
NEDD4L-218ENST00000587547 A0A1W2PPC1 479 aa10.25□□□□□ -0.77
NEDD4L-218ENST00000587547 FRAT2O75474 233 aaPredicted RBP10.25□□□□□ -0.77
NEDD4L-218ENST00000587547 CCDC102BQ68D86 513 aa10.25□□□□□ -0.77
NEDD4L-218ENST00000587547 C15orf52Q6ZUT6 534 aaKnown RBP10.25□□□□□ -0.77
NEDD4L-218ENST00000587547 ECHDC1Q9NTX5 307 aa10.25□□□□□ -0.77
NEDD4L-218ENST00000587547 GNL3LQ9NVN8 582 aaKnown RBP10.25□□□□□ -0.77
NEDD4L-218ENST00000587547 COL1A1P02452 1464 aaPredicted RBP10.24□□□□□ -0.77
NEDD4L-218ENST00000587547 MAST2Q6P0Q8 1798 aa10.24□□□□□ -0.77
NEDD4L-218ENST00000587547 CLCN1P35523 988 aa10.24□□□□□ -0.77
NEDD4L-218ENST00000587547 PDE1AP54750 535 aa10.24□□□□□ -0.77
NEDD4L-218ENST00000587547 MDM2Q00987 491 aaPredicted RBP10.24□□□□□ -0.77
NEDD4L-218ENST00000587547 CHAF1AQ13111 956 aaPredicted RBP10.24□□□□□ -0.77
NEDD4L-218ENST00000587547 FBXO33Q7Z6M2 555 aa10.24□□□□□ -0.77
NEDD4L-218ENST00000587547 KIAA0825Q8IV33 1275 aa10.24□□□□□ -0.77
NEDD4L-218ENST00000587547 PLEKHM2Q8IWE5 1019 aa10.24□□□□□ -0.77
NEDD4L-218ENST00000587547 BRI3BPQ8WY22 251 aa10.24□□□□□ -0.77
NEDD4L-218ENST00000587547 SNRKQ9NRH2 765 aa10.24□□□□□ -0.77
NEDD4L-218ENST00000587547 JAG2Q9Y219 1238 aa10.24□□□□□ -0.77
NEDD4L-218ENST00000587547 PCDHAC2Q9Y5I4 1007 aa10.24□□□□□ -0.77
NEDD4L-218ENST00000587547 SALL3Q9BXA9 1300 aa10.24□□□□□ -0.77
NEDD4L-218ENST00000587547 ERC2O15083 957 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 PPP1R12BO60237 982 aaPredicted RBP10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 MAP4K4O95819 1239 aaPredicted RBP10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 UQCRFS1P1P0C7P4 283 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 TAF1CQ15572 869 aaPredicted RBP10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 GPR153Q6NV75 609 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 PADI6Q6TGC4 694 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 PI16Q6UXB8 463 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 DEFB123Q8N688 67 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 OPTNQ96CV9 577 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 DNAJC2Q99543 621 aaKnown RBP10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 HTATIP2Q9BUP3 242 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 ADAM33Q9BZ11 813 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 COA1Q9GZY4 146 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 BOLA2Q9H3K6 86 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 ELP3Q9H9T3 547 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 CD209Q9NNX6 404 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 GPCPD1Q9NPB8 672 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 STAP2Q9UGK3 403 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 STXBP5LQ9Y2K9 1186 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 NR2E3Q9Y5X4 410 aa10.23□□□□□ -0.77
NEDD4L-218ENST00000587547 NDUFB9Q9Y6M9 179 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms