RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 VSTM4Q8IW00 320 aa19.39■□□□□ 0.69
PRKCSH-205ENST00000587327 IFNL3Q8IZI9 196 aa19.39■□□□□ 0.69
PRKCSH-205ENST00000587327 KRI1Q8N9T8 703 aaKnown RBP19.39■□□□□ 0.69
PRKCSH-205ENST00000587327 SLC26A6Q9BXS9 759 aa19.39■□□□□ 0.69
PRKCSH-205ENST00000587327 FANCLQ9NW38 375 aa19.39■□□□□ 0.69
PRKCSH-205ENST00000587327 COL5A3P25940 1745 aaPredicted RBP19.39■□□□□ 0.69
PRKCSH-205ENST00000587327 MYO5AQ9Y4I1 1855 aaKnown RBP19.38■□□□□ 0.69
PRKCSH-205ENST00000587327 IFIT3O14879 490 aaKnown RBP19.38■□□□□ 0.69
PRKCSH-205ENST00000587327 FMNL1O95466 1100 aaPredicted RBP19.38■□□□□ 0.69
PRKCSH-205ENST00000587327 PUM3Q15397 648 aaKnown RBP19.38■□□□□ 0.69
PRKCSH-205ENST00000587327 HOMER1Q86YM7 354 aa19.38■□□□□ 0.69
PRKCSH-205ENST00000587327 LPIN2Q92539 896 aa19.38■□□□□ 0.69
PRKCSH-205ENST00000587327 AK7Q96M32 723 aa19.38■□□□□ 0.69
PRKCSH-205ENST00000587327 EPB41L4AQ9HCS5 686 aaPredicted RBP19.38■□□□□ 0.69
PRKCSH-205ENST00000587327 LAMB2P55268 1798 aa19.38■□□□□ 0.69
PRKCSH-205ENST00000587327 IFNAR1P17181 557 aa19.37■□□□□ 0.69
PRKCSH-205ENST00000587327 MDM2Q00987 491 aaPredicted RBP19.37■□□□□ 0.69
PRKCSH-205ENST00000587327 GABPB1Q06547 395 aaPredicted RBP19.37■□□□□ 0.69
PRKCSH-205ENST00000587327 WASF1Q92558 559 aa19.37■□□□□ 0.69
PRKCSH-205ENST00000587327 NAPBQ9H115 298 aa19.37■□□□□ 0.69
PRKCSH-205ENST00000587327 FAM53CQ9NYF3 392 aa19.37■□□□□ 0.69
PRKCSH-205ENST00000587327 FGFR2P21802 821 aa19.37■□□□□ 0.69
PRKCSH-205ENST00000587327 BMP6P22004 513 aa19.37■□□□□ 0.69
PRKCSH-205ENST00000587327 CTDSPL2Q05D32 466 aa19.37■□□□□ 0.69
PRKCSH-205ENST00000587327 KRT222Q8N1A0 295 aa19.37■□□□□ 0.69
PRKCSH-205ENST00000587327 SPATA5Q8NB90 893 aa19.37■□□□□ 0.69
PRKCSH-205ENST00000587327 CNNM2Q9H8M5 875 aa19.37■□□□□ 0.69
PRKCSH-205ENST00000587327 ERCC6LQ2NKX8 1250 aa19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 STK11IPQ8N1F8 1099 aa19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 HOOK1Q9UJC3 728 aaKnown RBP19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.36■□□□□ 0.695e-8■■■■□ 24.4
PRKCSH-205ENST00000587327 BCORQ6W2J9 1755 aa19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 PHLPP2Q6ZVD8 1323 aa19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 BTBD18B2RXH4 712 aa19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 MMP1P03956 469 aa19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 TOP1P11387 765 aaKnown RBP19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 TOB1P50616 345 aaPredicted RBP19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 MAP3K12Q12852 859 aa19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 AKNAD1Q5T1N1 836 aa19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 MAGEB6Q8N7X4 407 aa19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 UTP14AQ9BVJ6 771 aaKnown RBP19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 KRT23Q9C075 422 aa19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 TACC3Q9Y6A5 838 aa19.36■□□□□ 0.69
PRKCSH-205ENST00000587327 ECM29Q5VYK3 1845 aa19.35■□□□□ 0.69
PRKCSH-205ENST00000587327 MROH5Q6ZUA9 1318 aa19.35■□□□□ 0.69
PRKCSH-205ENST00000587327 NID2Q14112 1375 aa19.35■□□□□ 0.69
PRKCSH-205ENST00000587327 NPHP1O15259 732 aa19.35■□□□□ 0.69
PRKCSH-205ENST00000587327 KCNQ2O43526 872 aa19.35■□□□□ 0.69
PRKCSH-205ENST00000587327 MBD4O95243 580 aa19.35■□□□□ 0.69
PRKCSH-205ENST00000587327 PIP4K2BP78356 416 aa19.35■□□□□ 0.69
PRKCSH-205ENST00000587327 PDE4BQ07343 736 aa19.35■□□□□ 0.69
PRKCSH-205ENST00000587327 SAFBQ15424 915 aaKnown RBP eCLIP19.35■□□□□ 0.69
PRKCSH-205ENST00000587327 TRIM65Q6PJ69 517 aa19.35■□□□□ 0.69
PRKCSH-205ENST00000587327 HELBQ8NG08 1087 aaPredicted RBP19.35■□□□□ 0.69
PRKCSH-205ENST00000587327 DNAI1Q9UI46 699 aa19.35■□□□□ 0.69
PRKCSH-205ENST00000587327 TMEM232C9JQI7 657 aa19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 FOXN1O15353 648 aa19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 IGSF3O75054 1194 aa19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 H2AFXP16104 143 aaPredicted RBP19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 GUCY1A2P33402 732 aa19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 SPECC1Q5M775 1068 aa19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 MFSD6Q6ZSS7 791 aa19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 LRRN4CLQ8ND94 238 aa19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 GSG1L2A8MUP6 293 aa19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 NTSR2O95665 410 aa19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 FCHSD1Q86WN1 690 aa19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 DIS3L2Q8IYB7 885 aaKnown RBP19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 ARMT1Q9H993 441 aa19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 INTS13Q9NVM9 706 aa19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 ZNF446Q9NWS9 450 aa19.34■□□□□ 0.69
PRKCSH-205ENST00000587327 PTPREP23469 700 aa19.33■□□□□ 0.69
PRKCSH-205ENST00000587327 RASGRF1Q13972 1273 aa19.33■□□□□ 0.69
PRKCSH-205ENST00000587327 PARP10Q53GL7 1025 aa19.33■□□□□ 0.69
PRKCSH-205ENST00000587327 RILPL1Q5EBL4 403 aa19.33■□□□□ 0.69
PRKCSH-205ENST00000587327 NT5DC1Q5TFE4 455 aa19.33■□□□□ 0.69
PRKCSH-205ENST00000587327 REXO1L1PQ8IX06 675 aa19.33■□□□□ 0.69
PRKCSH-205ENST00000587327 TRIM22Q8IYM9 498 aa19.33■□□□□ 0.69
PRKCSH-205ENST00000587327 FOXP1Q9H334 677 aaPredicted RBP19.33■□□□□ 0.69
PRKCSH-205ENST00000587327 SEC31BQ9NQW1 1179 aa19.33■□□□□ 0.69
PRKCSH-205ENST00000587327 FBXO2Q9UK22 296 aaPredicted RBP19.33■□□□□ 0.69
PRKCSH-205ENST00000587327 ZNF831Q5JPB2 1677 aa19.33■□□□□ 0.68
PRKCSH-205ENST00000587327 POSTNQ15063 836 aa19.33■□□□□ 0.68
PRKCSH-205ENST00000587327 TMEM139Q8IV31 216 aa19.33■□□□□ 0.68
PRKCSH-205ENST00000587327 MAN1B1Q9UKM7 699 aa19.33■□□□□ 0.68
PRKCSH-205ENST00000587327 ARHGAP6O43182 974 aa19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 SLC5A1P13866 664 aa19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 STAG1Q8WVM7 1258 aa19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 KCNJ14Q9UNX9 436 aa19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 NIP7Q9Y221 180 aaKnown RBP eCLIP19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 COL4A1P02462 1669 aa19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 POLR2DO15514 142 aaKnown RBP19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 ZSCAN12O43309 604 aa19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 SARSP49591 514 aaKnown RBP19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 GRIN1Q05586 938 aa19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 GOLGA8FQ08AF8 430 aa19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 GOLGA8DPQ0D2H9 430 aa19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 TBX2Q13207 712 aaPredicted RBP19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 SART3Q15020 963 aaKnown RBP19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 RTN1Q16799 776 aa19.32■□□□□ 0.68
PRKCSH-205ENST00000587327 SMARCC1Q92922 1105 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms