RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 C17orf99Q6UX52 265 aa13□□□□□ -0.33
ZNF540-205ENST00000587220 MAPKAPK5Q8IW41 473 aa13□□□□□ -0.33
ZNF540-205ENST00000587220 CRACR2BQ8N4Y2 399 aaPredicted RBP13□□□□□ -0.33
ZNF540-205ENST00000587220 SMCR8Q8TEV9 937 aaPredicted RBP13□□□□□ -0.33
ZNF540-205ENST00000587220 TGFBRAP1Q8WUH2 860 aa13□□□□□ -0.33
ZNF540-205ENST00000587220 YTHDC1Q96MU7 727 aaKnown RBP13□□□□□ -0.33
ZNF540-205ENST00000587220 TMEM106CQ9BVX2 250 aa13□□□□□ -0.33
ZNF540-205ENST00000587220 ARHGAP39Q9C0H5 1083 aa13□□□□□ -0.33
ZNF540-205ENST00000587220 PIH1D3Q9NQM4 214 aaKnown RBP13□□□□□ -0.33
ZNF540-205ENST00000587220 PI4KBQ9UBF8 816 aa13□□□□□ -0.33
ZNF540-205ENST00000587220 HERC5Q9UII4 1024 aaKnown RBP13□□□□□ -0.33
ZNF540-205ENST00000587220 MYO5AQ9Y4I1 1855 aaKnown RBP12.99□□□□□ -0.33
ZNF540-205ENST00000587220 ZSWIM8A7E2V4 1837 aa12.99□□□□□ -0.33
ZNF540-205ENST00000587220 ATAD5Q96QE3 1844 aa12.99□□□□□ -0.33
ZNF540-205ENST00000587220 HOXD10P28358 340 aa12.99□□□□□ -0.33
ZNF540-205ENST00000587220 PSMC4P43686 418 aa12.99□□□□□ -0.33
ZNF540-205ENST00000587220 PRMT2P55345 433 aa12.99□□□□□ -0.33
ZNF540-205ENST00000587220 PPP4CP60510 307 aa12.99□□□□□ -0.33
ZNF540-205ENST00000587220 MAP3K12Q12852 859 aa12.99□□□□□ -0.33
ZNF540-205ENST00000587220 GPAT2Q6NUI2 795 aa12.99□□□□□ -0.33
ZNF540-205ENST00000587220 ADGRA1Q86SQ6 560 aa12.99□□□□□ -0.33
ZNF540-205ENST00000587220 CERS3Q8IU89 383 aa12.99□□□□□ -0.33
ZNF540-205ENST00000587220 RPAP2Q8IXW5 612 aaPredicted RBP12.99□□□□□ -0.33
ZNF540-205ENST00000587220 CLASRPQ8N2M8 674 aaKnown RBP12.99□□□□□ -0.33
ZNF540-205ENST00000587220 IL1RAPL2Q9NP60 686 aa12.99□□□□□ -0.33
ZNF540-205ENST00000587220 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.99□□□□□ -0.33
ZNF540-205ENST00000587220 FLT1P17948 1338 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 FOCADQ5VW36 1801 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 PHIPQ8WWQ0 1821 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 PDE4DIPQ5VU43 2346 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 POTEFA5A3E0 1075 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 MYCP01106 439 aaPredicted RBP12.98□□□□□ -0.33
ZNF540-205ENST00000587220 HLA-DOAP06340 250 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 IFIT2P09913 472 aaKnown RBP12.98□□□□□ -0.33
ZNF540-205ENST00000587220 CAP2P40123 477 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 USP5P45974 858 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 FCGRTP55899 365 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 SPP2Q13103 211 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 SLC4A8Q2Y0W8 1093 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 CCDC84Q86UT8 332 aaPredicted RBP12.98□□□□□ -0.33
ZNF540-205ENST00000587220 MAGEB6Q8N7X4 407 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 MIGA1Q8NAN2 632 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 ZNF280CQ8ND82 737 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 RHPN1Q8TCX5 695 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 RAET1EQ8TD07 263 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 KIF1BPQ96EK5 621 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 ZNF333Q96JL9 665 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 TBC1D2Q9BYX2 928 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 AS3MTQ9HBK9 375 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 PNMA3Q9UL41 463 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 SLC45A1Q9Y2W3 748 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 NDUFB9Q9Y6M9 179 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 BRCA2P51587 3418 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 PTPRFP10586 1907 aa12.98□□□□□ -0.33
ZNF540-205ENST00000587220 CDK5RAP2Q96SN8 1893 aa12.97□□□□□ -0.33
ZNF540-205ENST00000587220 RBBP6Q7Z6E9 1792 aaKnown RBP12.97□□□□□ -0.33
ZNF540-205ENST00000587220 ADGRA2Q96PE1 1338 aa12.97□□□□□ -0.33
ZNF540-205ENST00000587220 TTF1Q15361 905 aaPredicted RBP12.97□□□□□ -0.33
ZNF540-205ENST00000587220 SH3TC2Q8TF17 1288 aa12.97□□□□□ -0.33
ZNF540-205ENST00000587220 TRIM47Q96LD4 638 aa12.97□□□□□ -0.33
ZNF540-205ENST00000587220 ZBTB40Q9NUA8 1239 aa12.97□□□□□ -0.33
ZNF540-205ENST00000587220 SAP30BPQ9UHR5 308 aaKnown RBP12.97□□□□□ -0.33
ZNF540-205ENST00000587220 PALD1Q9ULE6 856 aa12.97□□□□□ -0.33
ZNF540-205ENST00000587220 AGTPBP1Q9UPW5 1226 aa12.97□□□□□ -0.33
ZNF540-205ENST00000587220 MYPNQ86TC9 1320 aa12.96□□□□□ -0.33
ZNF540-205ENST00000587220 USP17L5A8MUK1 530 aa12.96□□□□□ -0.33
ZNF540-205ENST00000587220 ASNSP08243 561 aa12.96□□□□□ -0.33
ZNF540-205ENST00000587220 OSBPP22059 807 aa12.96□□□□□ -0.33
ZNF540-205ENST00000587220 DYNLL1P63167 89 aaKnown RBP12.96□□□□□ -0.33
ZNF540-205ENST00000587220 PABPC4Q13310 644 aaKnown RBP eCLIP12.96□□□□□ -0.33
ZNF540-205ENST00000587220 TMED8Q6PL24 325 aaPredicted RBP12.96□□□□□ -0.33
ZNF540-205ENST00000587220 FOXP4Q8IVH2 680 aaPredicted RBP12.96□□□□□ -0.33
ZNF540-205ENST00000587220 PROCA1Q8NCQ7 364 aaPredicted RBP12.96□□□□□ -0.33
ZNF540-205ENST00000587220 ANTXR1Q9H6X2 564 aa12.96□□□□□ -0.33
ZNF540-205ENST00000587220 SRRDQ9UH36 339 aa12.96□□□□□ -0.33
ZNF540-205ENST00000587220 RAB11FIP3O75154 756 aa12.95□□□□□ -0.34
ZNF540-205ENST00000587220 BCRP11274 1271 aa12.95□□□□□ -0.34
ZNF540-205ENST00000587220 HMGCS2P54868 508 aa12.95□□□□□ -0.34
ZNF540-205ENST00000587220 TREML2Q5T2D2 321 aa12.95□□□□□ -0.34
ZNF540-205ENST00000587220 PRPF38BQ5VTL8 546 aaKnown RBP12.95□□□□□ -0.34
ZNF540-205ENST00000587220 DNAJC2Q99543 621 aaKnown RBP12.95□□□□□ -0.34
ZNF540-205ENST00000587220 BIN2Q9UBW5 565 aaPredicted RBP12.95□□□□□ -0.34
ZNF540-205ENST00000587220 MKI67P46013 3256 aaKnown RBP12.95□□□□□ -0.34
ZNF540-205ENST00000587220 SIPA1L1O43166 1804 aa12.95□□□□□ -0.34
ZNF540-205ENST00000587220 MYH1P12882 1939 aa12.94□□□□□ -0.34
ZNF540-205ENST00000587220 MGAMO43451 1857 aa12.94□□□□□ -0.34
ZNF540-205ENST00000587220 TNPO2O14787 897 aaKnown RBP12.94□□□□□ -0.34
ZNF540-205ENST00000587220 EN2P19622 333 aaPredicted RBP12.94□□□□□ -0.34
ZNF540-205ENST00000587220 CTGFP29279 349 aa12.94□□□□□ -0.34
ZNF540-205ENST00000587220 PDE3AQ14432 1141 aa12.94□□□□□ -0.34
ZNF540-205ENST00000587220 SLC9C2Q5TAH2 1124 aa12.94□□□□□ -0.34
ZNF540-205ENST00000587220 ANKRD13CQ8N6S4 541 aa12.94□□□□□ -0.34
ZNF540-205ENST00000587220 TMOD4Q9NZQ9 345 aa12.94□□□□□ -0.34
ZNF540-205ENST00000587220 LOC285556D6RIA3 1793 aa12.94□□□□□ -0.34
ZNF540-205ENST00000587220 MAGEB6P1A0A0J9YX57 407 aa12.93□□□□□ -0.34
ZNF540-205ENST00000587220 GOLIM4O00461 696 aa12.93□□□□□ -0.34
ZNF540-205ENST00000587220 GDF11O95390 407 aa12.93□□□□□ -0.34
ZNF540-205ENST00000587220 GRK4P32298 578 aa12.93□□□□□ -0.34
ZNF540-205ENST00000587220 PRKCZQ05513 592 aa12.93□□□□□ -0.34
ZNF540-205ENST00000587220 MTMR2Q13614 643 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms