RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 MIGA2Q7L4E1 593 aa13.97□□□□□ -0.17
LRFN3-202ENST00000585876 REM2Q8IYK8 340 aaPredicted RBP13.97□□□□□ -0.17
LRFN3-202ENST00000585876 PALD1Q9ULE6 856 aa13.97□□□□□ -0.17
LRFN3-202ENST00000585876 CSADQ9Y600 493 aa13.97□□□□□ -0.17
LRFN3-202ENST00000585876 M0R2C6 588 aa13.96□□□□□ -0.17
LRFN3-202ENST00000585876 GPAA1O43292 621 aa13.96□□□□□ -0.17
LRFN3-202ENST00000585876 HLA-DOAP06340 250 aa13.96□□□□□ -0.17
LRFN3-202ENST00000585876 GSPT1P15170 499 aaKnown RBP13.96□□□□□ -0.17
LRFN3-202ENST00000585876 GNAT2P19087 354 aa13.96□□□□□ -0.17
LRFN3-202ENST00000585876 PAXIP1Q6ZW49 1069 aaPredicted RBP13.96□□□□□ -0.17
LRFN3-202ENST00000585876 FOXP4Q8IVH2 680 aaPredicted RBP13.96□□□□□ -0.17
LRFN3-202ENST00000585876 SDR42E1Q8WUS8 393 aa13.96□□□□□ -0.17
LRFN3-202ENST00000585876 WNK4Q96J92 1243 aa13.96□□□□□ -0.17
LRFN3-202ENST00000585876 DNAJC18Q9H819 358 aa13.96□□□□□ -0.17
LRFN3-202ENST00000585876 ROBO3Q96MS0 1386 aa13.96□□□□□ -0.18
LRFN3-202ENST00000585876 TRIM6-TRIM34B2RNG4 842 aa13.95□□□□□ -0.18
LRFN3-202ENST00000585876 PRKAB2O43741 272 aa13.95□□□□□ -0.18
LRFN3-202ENST00000585876 CTNND1O60716 968 aaKnown RBP13.95□□□□□ -0.18
LRFN3-202ENST00000585876 AOC2O75106 756 aa13.95□□□□□ -0.18
LRFN3-202ENST00000585876 INPP5BP32019 993 aa13.95□□□□□ -0.18
LRFN3-202ENST00000585876 TTC6Q86TZ1 520 aa13.95□□□□□ -0.18
LRFN3-202ENST00000585876 ZKSCAN4Q969J2 545 aaPredicted RBP13.95□□□□□ -0.18
LRFN3-202ENST00000585876 SLC10A4Q96EP9 437 aa13.95□□□□□ -0.18
LRFN3-202ENST00000585876 HELLSQ9NRZ9 838 aa13.95□□□□□ -0.18
LRFN3-202ENST00000585876 SAP30BPQ9UHR5 308 aaKnown RBP13.95□□□□□ -0.18
LRFN3-202ENST00000585876 SERPINB13Q9UIV8 391 aa13.95□□□□□ -0.18
LRFN3-202ENST00000585876 GSG1L2A8MUP6 293 aa13.94□□□□□ -0.18
LRFN3-202ENST00000585876 HIP1O00291 1037 aa13.94□□□□□ -0.18
LRFN3-202ENST00000585876 GJA5P36382 358 aa13.94□□□□□ -0.18
LRFN3-202ENST00000585876 MAP2K1Q02750 393 aaPredicted RBP13.94□□□□□ -0.18
LRFN3-202ENST00000585876 GABPAQ06546 454 aa13.94□□□□□ -0.18
LRFN3-202ENST00000585876 SBK1Q52WX2 424 aa13.94□□□□□ -0.18
LRFN3-202ENST00000585876 TATDN1Q6P1N9 297 aa13.94□□□□□ -0.18
LRFN3-202ENST00000585876 ERO1BQ86YB8 467 aa13.94□□□□□ -0.18
LRFN3-202ENST00000585876 SCYL3Q8IZE3 742 aa13.94□□□□□ -0.18
LRFN3-202ENST00000585876 OPTNQ96CV9 577 aa13.94□□□□□ -0.18
LRFN3-202ENST00000585876 SEC62Q99442 399 aaKnown RBP13.94□□□□□ -0.18
LRFN3-202ENST00000585876 ELP3Q9H9T3 547 aa13.94□□□□□ -0.18
LRFN3-202ENST00000585876 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.94□□□□□ -0.18
LRFN3-202ENST00000585876 WBP1LQ9NX94 342 aa13.94□□□□□ -0.18
LRFN3-202ENST00000585876 PPP4R2Q9NY27 417 aa13.94□□□□□ -0.18
LRFN3-202ENST00000585876 SLC4A4Q9Y6R1 1079 aa13.94□□□□□ -0.18
LRFN3-202ENST00000585876 A0A0D9SFI3 127 aa13.93□□□□□ -0.18
LRFN3-202ENST00000585876 FAM196BA6NMK8 535 aa13.93□□□□□ -0.18
LRFN3-202ENST00000585876 FOXP2O15409 715 aa13.93□□□□□ -0.18
LRFN3-202ENST00000585876 SLURP2P0DP57 97 aa13.93□□□□□ -0.18
LRFN3-202ENST00000585876 SDSP20132 328 aa13.93□□□□□ -0.18
LRFN3-202ENST00000585876 PLCD1P51178 756 aa13.93□□□□□ -0.18
LRFN3-202ENST00000585876 KIF23Q02241 960 aaPredicted RBP13.93□□□□□ -0.18
LRFN3-202ENST00000585876 PPATQ06203 517 aa13.93□□□□□ -0.18
LRFN3-202ENST00000585876 PPIL2Q13356 520 aa13.93□□□□□ -0.18
LRFN3-202ENST00000585876 C12orf60Q5U649 245 aa13.93□□□□□ -0.18
LRFN3-202ENST00000585876 RILPL2Q969X0 211 aa13.93□□□□□ -0.18
LRFN3-202ENST00000585876 DDRGK1Q96HY6 314 aa13.93□□□□□ -0.18
LRFN3-202ENST00000585876 ZIC5Q96T25 663 aa13.93□□□□□ -0.18
LRFN3-202ENST00000585876 EPB41L4AQ9HCS5 686 aaPredicted RBP13.93□□□□□ -0.18
LRFN3-202ENST00000585876 GINM1Q9NU53 330 aa13.93□□□□□ -0.18
LRFN3-202ENST00000585876 MCM9Q9NXL9 1143 aa13.93□□□□□ -0.18
LRFN3-202ENST00000585876 ARPP21Q9UBL0 812 aaPredicted RBP13.93□□□□□ -0.18
LRFN3-202ENST00000585876 ZMYM6O95789 1325 aa13.92□□□□□ -0.18
LRFN3-202ENST00000585876 TESPA1A2RU30 521 aaPredicted RBP13.92□□□□□ -0.18
LRFN3-202ENST00000585876 MANSC4A6NHS7 340 aaPredicted RBP13.92□□□□□ -0.18
LRFN3-202ENST00000585876 CAP2P40123 477 aa13.92□□□□□ -0.18
LRFN3-202ENST00000585876 TM4SF4P48230 202 aa13.92□□□□□ -0.18
LRFN3-202ENST00000585876 SREBF2Q12772 1141 aa13.92□□□□□ -0.18
LRFN3-202ENST00000585876 GRM1Q13255 1194 aa13.92□□□□□ -0.18
LRFN3-202ENST00000585876 NMIQ13287 307 aaPredicted RBP13.92□□□□□ -0.18
LRFN3-202ENST00000585876 MCMDC2Q4G0Z9 681 aa13.92□□□□□ -0.18
LRFN3-202ENST00000585876 CRACR2BQ8N4Y2 399 aaPredicted RBP13.92□□□□□ -0.18
LRFN3-202ENST00000585876 FAM227BQ96M60 508 aa13.92□□□□□ -0.18
LRFN3-202ENST00000585876 KCNH4Q9UQ05 1017 aa13.92□□□□□ -0.18
LRFN3-202ENST00000585876 PATL2C9JE40 543 aaKnown RBP13.91□□□□□ -0.18
LRFN3-202ENST00000585876 CA12O43570 354 aa13.91□□□□□ -0.18
LRFN3-202ENST00000585876 POLR3DP05423 398 aaPredicted RBP13.91□□□□□ -0.18
LRFN3-202ENST00000585876 PTPRAP18433 802 aa13.91□□□□□ -0.18
LRFN3-202ENST00000585876 SHMT1P34896 483 aa13.91□□□□□ -0.18
LRFN3-202ENST00000585876 INHBEP58166 350 aa13.91□□□□□ -0.18
LRFN3-202ENST00000585876 RRP1BQ14684 758 aaKnown RBP13.91□□□□□ -0.18
LRFN3-202ENST00000585876 BMP2KLQ5H9B9 411 aa13.91□□□□□ -0.18
LRFN3-202ENST00000585876 CTR9Q6PD62 1173 aa13.91□□□□□ -0.18
LRFN3-202ENST00000585876 CNKSR2Q8WXI2 1034 aa13.91□□□□□ -0.18
LRFN3-202ENST00000585876 OTUD5Q96G74 571 aa13.91□□□□□ -0.18
LRFN3-202ENST00000585876 MS4A4AQ96JQ5 239 aa13.91□□□□□ -0.18
LRFN3-202ENST00000585876 TBC1D2Q9BYX2 928 aa13.91□□□□□ -0.18
LRFN3-202ENST00000585876 SAGE1Q9NXZ1 904 aa13.91□□□□□ -0.18
LRFN3-202ENST00000585876 SWAP70Q9UH65 585 aa13.91□□□□□ -0.18
LRFN3-202ENST00000585876 CCDC171Q6TFL3 1326 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 RAD50Q92878 1312 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 MYH4Q9Y623 1939 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 USP17L12C9JPN9 530 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 USP17L21D6R901 530 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 IRF6O14896 467 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 ASNSP08243 561 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 CYP2D6P10635 497 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 EVX2Q03828 476 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 ALX1Q15699 326 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 C16orf86Q6ZW13 317 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 AMOTL1Q8IY63 956 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 IFNL3Q8IZI9 196 aa13.9□□□□□ -0.18
LRFN3-202ENST00000585876 CFHR5Q9BXR6 569 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms