RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 PRKCZQ05513 592 aa28.23■■■□□ 2.11
LSM7-203ENST00000585409 TTC39AQ5SRH9 613 aa28.23■■■□□ 2.11
LSM7-203ENST00000585409 PTPRAP18433 802 aa28.22■■■□□ 2.11
LSM7-203ENST00000585409 RGS3P49796 1198 aa28.22■■■□□ 2.11
LSM7-203ENST00000585409 SH3BP5LQ7L8J4 393 aa28.22■■■□□ 2.11
LSM7-203ENST00000585409 ZGPATQ8N5A5 531 aaKnown RBP28.22■■■□□ 2.11
LSM7-203ENST00000585409 EAF2Q96CJ1 260 aaPredicted RBP28.22■■■□□ 2.11
LSM7-203ENST00000585409 PDS5AQ29RF7 1337 aaKnown RBP28.21■■■□□ 2.11
LSM7-203ENST00000585409 CHRDL2Q6WN34 429 aa28.21■■■□□ 2.11
LSM7-203ENST00000585409 FASTKD5Q7L8L6 764 aaKnown RBP28.21■■■□□ 2.11
LSM7-203ENST00000585409 DBNDD2Q9BQY9 259 aa28.21■■■□□ 2.11
LSM7-203ENST00000585409 CCDC8Q9H0W5 538 aaPredicted RBP28.21■■■□□ 2.11
LSM7-203ENST00000585409 SLC45A1Q9Y2W3 748 aa28.21■■■□□ 2.11
LSM7-203ENST00000585409 AFG3L2Q9Y4W6 797 aa28.21■■■□□ 2.11
LSM7-203ENST00000585409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.21■■■□□ 2.11
LSM7-203ENST00000585409 ZHX2Q9Y6X8 837 aa28.21■■■□□ 2.11
LSM7-203ENST00000585409 UBXN2AP68543 259 aa28.2■■■□□ 2.1
LSM7-203ENST00000585409 SLAIN1Q8ND83 568 aa28.2■■■□□ 2.1
LSM7-203ENST00000585409 DPF3Q92784 378 aa28.2■■■□□ 2.1
LSM7-203ENST00000585409 RNF208Q9H0X6 261 aa28.2■■■□□ 2.1
LSM7-203ENST00000585409 PICK1Q9NRD5 415 aa28.2■■■□□ 2.1
LSM7-203ENST00000585409 GABRQQ9UN88 632 aa28.2■■■□□ 2.1
LSM7-203ENST00000585409 RANBP2P49792 3224 aaKnown RBP28.19■■■□□ 2.1
LSM7-203ENST00000585409 SZT2Q5T011 3432 aa28.19■■■□□ 2.1
LSM7-203ENST00000585409 FAM163AQ96GL9 167 aaPredicted RBP28.19■■■□□ 2.1
LSM7-203ENST00000585409 ZNF512BQ96KM6 892 aaPredicted RBP28.19■■■□□ 2.1
LSM7-203ENST00000585409 DBNLQ9UJU6 430 aaKnown RBP28.19■■■□□ 2.1
LSM7-203ENST00000585409 ARID4AP29374 1257 aaPredicted RBP28.18■■■□□ 2.1
LSM7-203ENST00000585409 HTATIP2Q9BUP3 242 aa28.18■■■□□ 2.1
LSM7-203ENST00000585409 BIN2Q9UBW5 565 aaPredicted RBP28.18■■■□□ 2.1
LSM7-203ENST00000585409 DOCK3Q8IZD9 2030 aa28.18■■■□□ 2.1
LSM7-203ENST00000585409 DDTLA6NHG4 134 aaPredicted RBP28.17■■■□□ 2.1
LSM7-203ENST00000585409 RASGRF1Q13972 1273 aa28.17■■■□□ 2.1
LSM7-203ENST00000585409 GPATCH3Q96I76 525 aa28.17■■■□□ 2.1
LSM7-203ENST00000585409 BCL11AQ9H165 835 aa28.17■■■□□ 2.1
LSM7-203ENST00000585409 DDX4Q9NQI0 724 aaKnown RBP28.17■■■□□ 2.1
LSM7-203ENST00000585409 RBM27Q9P2N5 1060 aaKnown RBP28.17■■■□□ 2.1
LSM7-203ENST00000585409 CTNND1O60716 968 aaKnown RBP28.16■■■□□ 2.1
LSM7-203ENST00000585409 SPTY2D1Q68D10 685 aaPredicted RBP28.16■■■□□ 2.1
LSM7-203ENST00000585409 U2AF1L4Q8WU68 220 aaKnown RBP28.16■■■□□ 2.1
LSM7-203ENST00000585409 UNC93B1Q9H1C4 597 aa28.16■■■□□ 2.1
LSM7-203ENST00000585409 PRO3102Q9H379 93 aa28.16■■■□□ 2.1
LSM7-203ENST00000585409 GADL1Q6ZQY3 521 aa28.15■■■□□ 2.1
LSM7-203ENST00000585409 DZIP1Q86YF9 867 aaKnown RBP28.15■■■□□ 2.1
LSM7-203ENST00000585409 ZSCAN29Q8IWY8 852 aaPredicted RBP28.15■■■□□ 2.1
LSM7-203ENST00000585409 SPATA5Q8NB90 893 aa28.15■■■□□ 2.1
LSM7-203ENST00000585409 ADCY3O60266 1144 aa28.14■■■□□ 2.1
LSM7-203ENST00000585409 SLURP2P0DP57 97 aa28.14■■■□□ 2.1
LSM7-203ENST00000585409 FLT3LGP49771 235 aa28.14■■■□□ 2.1
LSM7-203ENST00000585409 SLF2Q8IX21 1173 aa28.14■■■□□ 2.1
LSM7-203ENST00000585409 PXYLP1Q8TE99 480 aa28.14■■■□□ 2.1
LSM7-203ENST00000585409 SGPL1O95470 568 aa28.13■■■□□ 2.09
LSM7-203ENST00000585409 IRF5Q13568 498 aa28.13■■■□□ 2.09
LSM7-203ENST00000585409 TLR7Q9NYK1 1049 aaKnown RBP28.13■■■□□ 2.09
LSM7-203ENST00000585409 ABCF2Q9UG63 623 aa28.13■■■□□ 2.09
LSM7-203ENST00000585409 LOC285556D6RIA3 1793 aa28.12■■■□□ 2.09
LSM7-203ENST00000585409 IGSF3O75054 1194 aa28.12■■■□□ 2.09
LSM7-203ENST00000585409 FARP2O94887 1054 aaPredicted RBP28.12■■■□□ 2.09
LSM7-203ENST00000585409 BTDP43251 543 aa28.12■■■□□ 2.09
LSM7-203ENST00000585409 ANKRD45Q5TZF3 282 aa28.12■■■□□ 2.09
LSM7-203ENST00000585409 HMG20BQ9P0W2 317 aa28.12■■■□□ 2.09
LSM7-203ENST00000585409 ATAD5Q96QE3 1844 aa28.12■■■□□ 2.09
LSM7-203ENST00000585409 MROH7-TTC4A0A0A0MT08 1334 aa28.12■■■□□ 2.09
LSM7-203ENST00000585409 SMARCA5O60264 1052 aaPredicted RBP28.11■■■□□ 2.09
LSM7-203ENST00000585409 SMC5Q8IY18 1101 aa28.11■■■□□ 2.09
LSM7-203ENST00000585409 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.11■■■□□ 2.09
LSM7-203ENST00000585409 AGTPBP1Q9UPW5 1226 aa28.11■■■□□ 2.09
LSM7-203ENST00000585409 GPR75-ASB3A0A0A6YYF3 556 aa28.1■■■□□ 2.09
LSM7-203ENST00000585409 TRIM75PA6NK02 468 aa28.1■■■□□ 2.09
LSM7-203ENST00000585409 TNPO2O14787 897 aaKnown RBP28.1■■■□□ 2.09
LSM7-203ENST00000585409 TBC1D12O60347 775 aa28.1■■■□□ 2.09
LSM7-203ENST00000585409 NPM3O75607 178 aaKnown RBP28.1■■■□□ 2.09
LSM7-203ENST00000585409 INHAP05111 366 aa28.1■■■□□ 2.09
LSM7-203ENST00000585409 ELNP15502 786 aa28.1■■■□□ 2.09
LSM7-203ENST00000585409 CAPN2P17655 700 aa28.1■■■□□ 2.09
LSM7-203ENST00000585409 RHBDL3P58872 404 aa28.1■■■□□ 2.09
LSM7-203ENST00000585409 PICALMQ13492 652 aa28.1■■■□□ 2.09
LSM7-203ENST00000585409 SMCR8Q8TEV9 937 aaPredicted RBP28.1■■■□□ 2.09
LSM7-203ENST00000585409 ZNF384Q8TF68 577 aa28.1■■■□□ 2.09
LSM7-203ENST00000585409 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.1■■■□□ 2.09
LSM7-203ENST00000585409 MCAMP43121 646 aa28.09■■■□□ 2.09
LSM7-203ENST00000585409 NR2E3Q9Y5X4 410 aa28.09■■■□□ 2.09
LSM7-203ENST00000585409 ALPK3Q96L96 1907 aa28.09■■■□□ 2.09
LSM7-203ENST00000585409 MECOMQ03112 1051 aa28.08■■■□□ 2.09
LSM7-203ENST00000585409 ERICH6Q7L0X2 663 aa28.08■■■□□ 2.09
LSM7-203ENST00000585409 PAK6Q9NQU5 681 aaPredicted RBP28.08■■■□□ 2.09
LSM7-203ENST00000585409 COL2A1P02458 1487 aaPredicted RBP28.08■■■□□ 2.09
LSM7-203ENST00000585409 IGHDP01880 384 aa28.07■■■□□ 2.08
LSM7-203ENST00000585409 CCDC84Q86UT8 332 aaPredicted RBP28.07■■■□□ 2.08
LSM7-203ENST00000585409 ECHDC1Q9NTX5 307 aa28.07■■■□□ 2.08
LSM7-203ENST00000585409 ATP5JP18859 108 aa28.06■■■□□ 2.08
LSM7-203ENST00000585409 TTF1Q15361 905 aaPredicted RBP28.06■■■□□ 2.08
LSM7-203ENST00000585409 TREML2Q5T2D2 321 aa28.06■■■□□ 2.08
LSM7-203ENST00000585409 ANKRD13CQ8N6S4 541 aa28.06■■■□□ 2.08
LSM7-203ENST00000585409 LRP2BPQ9P2M1 347 aa28.06■■■□□ 2.08
LSM7-203ENST00000585409 GSTO1P78417 241 aa28.05■■■□□ 2.08
LSM7-203ENST00000585409 FAM110CQ1W6H9 321 aa28.05■■■□□ 2.08
LSM7-203ENST00000585409 PROCA1Q8NCQ7 364 aaPredicted RBP28.05■■■□□ 2.08
LSM7-203ENST00000585409 CRISPLD2Q9H0B8 497 aa28.05■■■□□ 2.08
LSM7-203ENST00000585409 OSBPL5Q9H0X9 879 aaPredicted RBP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms