RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 MAP3K10Q02779 954 aa16.22■□□□□ 0.19
SREBF1-223ENST00000584760 NOL9Q5SY16 702 aaKnown RBP16.22■□□□□ 0.19
SREBF1-223ENST00000584760 ERO1BQ86YB8 467 aa16.22■□□□□ 0.19
SREBF1-223ENST00000584760 SH3RF3Q8TEJ3 882 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-223ENST00000584760 LRRCC1Q9C099 1032 aa16.22■□□□□ 0.19
SREBF1-223ENST00000584760 OSBPL5Q9H0X9 879 aaPredicted RBP16.22■□□□□ 0.19
SREBF1-223ENST00000584760 PHF20L1A8MW92 1017 aa16.21■□□□□ 0.19
SREBF1-223ENST00000584760 BTBD19C9JJ37 291 aa16.21■□□□□ 0.19
SREBF1-223ENST00000584760 BAG3O95817 575 aa16.21■□□□□ 0.19
SREBF1-223ENST00000584760 PLCG2P16885 1265 aa16.21■□□□□ 0.19
SREBF1-223ENST00000584760 LACTBP83111 547 aaPredicted RBP16.21■□□□□ 0.19
SREBF1-223ENST00000584760 ZSCAN29Q8IWY8 852 aaPredicted RBP16.21■□□□□ 0.19
SREBF1-223ENST00000584760 TEX11Q8IYF3 940 aa16.21■□□□□ 0.19
SREBF1-223ENST00000584760 NOL10Q9BSC4 688 aaKnown RBP16.21■□□□□ 0.19
SREBF1-223ENST00000584760 PCDHB15Q9Y5E8 787 aa16.21■□□□□ 0.19
SREBF1-223ENST00000584760 SLURP2P0DP57 97 aa16.2■□□□□ 0.18
SREBF1-223ENST00000584760 PPIL2Q13356 520 aa16.2■□□□□ 0.18
SREBF1-223ENST00000584760 TMED8Q6PL24 325 aaPredicted RBP16.2■□□□□ 0.18
SREBF1-223ENST00000584760 MAGEB6Q8N7X4 407 aa16.2■□□□□ 0.18
SREBF1-223ENST00000584760 CRBNQ96SW2 442 aa16.2■□□□□ 0.18
SREBF1-223ENST00000584760 DCTPP1Q9H773 170 aa16.2■□□□□ 0.18
SREBF1-223ENST00000584760 IRF6O14896 467 aa16.19■□□□□ 0.18
SREBF1-223ENST00000584760 SMARCA5O60264 1052 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-223ENST00000584760 CYP7A1P22680 504 aa16.19■□□□□ 0.18
SREBF1-223ENST00000584760 MAP3K12Q12852 859 aa16.19■□□□□ 0.18
SREBF1-223ENST00000584760 SNAPC2Q13487 334 aa16.19■□□□□ 0.18
SREBF1-223ENST00000584760 TTF1Q15361 905 aaPredicted RBP16.19■□□□□ 0.18
SREBF1-223ENST00000584760 DPF3Q92784 378 aa16.19■□□□□ 0.18
SREBF1-223ENST00000584760 BCL11AQ9H165 835 aa16.19■□□□□ 0.18
SREBF1-223ENST00000584760 FLT1P17948 1338 aa16.19■□□□□ 0.18
SREBF1-223ENST00000584760 CENPFP49454 3210 aa16.18■□□□□ 0.18
SREBF1-223ENST00000584760 TBC1D12O60347 775 aa16.18■□□□□ 0.18
SREBF1-223ENST00000584760 ATP5JP18859 108 aa16.18■□□□□ 0.18
SREBF1-223ENST00000584760 PPATQ06203 517 aa16.18■□□□□ 0.18
SREBF1-223ENST00000584760 MTFR1Q15390 333 aa16.18■□□□□ 0.18
SREBF1-223ENST00000584760 CHRDL2Q6WN34 429 aa16.18■□□□□ 0.18
SREBF1-223ENST00000584760 DNAJC2Q99543 621 aaKnown RBP16.18■□□□□ 0.18
SREBF1-223ENST00000584760 LOC285556D6RIA3 1793 aa16.18■□□□□ 0.18
SREBF1-223ENST00000584760 FAM196BA6NMK8 535 aa16.17■□□□□ 0.18
SREBF1-223ENST00000584760 GOLIM4O00461 696 aa16.17■□□□□ 0.18
SREBF1-223ENST00000584760 GNRH1P01148 92 aa16.17■□□□□ 0.18
SREBF1-223ENST00000584760 DYNLL1P63167 89 aaKnown RBP16.17■□□□□ 0.18
SREBF1-223ENST00000584760 CERS3Q8IU89 383 aa16.17■□□□□ 0.18
SREBF1-223ENST00000584760 SCYL3Q8IZE3 742 aa16.17■□□□□ 0.18
SREBF1-223ENST00000584760 MIGA1Q8NAN2 632 aa16.17■□□□□ 0.18
SREBF1-223ENST00000584760 TGFBRAP1Q8WUH2 860 aa16.17■□□□□ 0.18
SREBF1-223ENST00000584760 EDC3Q96F86 508 aaKnown RBP16.17■□□□□ 0.18
SREBF1-223ENST00000584760 HAUS7Q99871 368 aa16.17■□□□□ 0.18
SREBF1-223ENST00000584760 ZCCHC17Q9NP64 241 aaKnown RBP16.17■□□□□ 0.18
SREBF1-223ENST00000584760 CPA4Q9UI42 421 aa16.17■□□□□ 0.18
SREBF1-223ENST00000584760 KCNH4Q9UQ05 1017 aa16.17■□□□□ 0.18
SREBF1-223ENST00000584760 PDE6AP16499 860 aa16.16■□□□□ 0.18
SREBF1-223ENST00000584760 PSMC4P43686 418 aa16.16■□□□□ 0.18
SREBF1-223ENST00000584760 PRMT2P55345 433 aa16.16■□□□□ 0.18
SREBF1-223ENST00000584760 MAPKAPK5Q8IW41 473 aa16.16■□□□□ 0.18
SREBF1-223ENST00000584760 BOLA2Q9H3K6 86 aa16.16■□□□□ 0.18
SREBF1-223ENST00000584760 PAG1Q9NWQ8 432 aa16.16■□□□□ 0.18
SREBF1-223ENST00000584760 TCRBV5S4A2TA0A5A2 114 aa16.15■□□□□ 0.18
SREBF1-223ENST00000584760 CTNND1O60716 968 aaKnown RBP16.15■□□□□ 0.18
SREBF1-223ENST00000584760 PTPRAP18433 802 aa16.15■□□□□ 0.18
SREBF1-223ENST00000584760 CTGFP29279 349 aa16.15■□□□□ 0.18
SREBF1-223ENST00000584760 SLC9C2Q5TAH2 1124 aa16.15■□□□□ 0.18
SREBF1-223ENST00000584760 C17orf99Q6UX52 265 aa16.15■□□□□ 0.18
SREBF1-223ENST00000584760 SHISA4Q96DD7 197 aa16.15■□□□□ 0.18
SREBF1-223ENST00000584760 TRIM47Q96LD4 638 aa16.15■□□□□ 0.18
SREBF1-223ENST00000584760 RIOK1Q9BRS2 568 aaKnown RBP16.15■□□□□ 0.18
SREBF1-223ENST00000584760 DHX36Q9H2U1 1008 aaKnown RBP16.15■□□□□ 0.18
SREBF1-223ENST00000584760 RBM27Q9P2N5 1060 aaKnown RBP16.15■□□□□ 0.18
SREBF1-223ENST00000584760 SRRDQ9UH36 339 aa16.15■□□□□ 0.18
SREBF1-223ENST00000584760 HERC5Q9UII4 1024 aaKnown RBP16.15■□□□□ 0.18
SREBF1-223ENST00000584760 BAZ2AQ9UIF9 1905 aaKnown RBP16.15■□□□□ 0.18
SREBF1-223ENST00000584760 ZSWIM8A7E2V4 1837 aa16.15■□□□□ 0.18
SREBF1-223ENST00000584760 MYH8P13535 1937 aa16.14■□□□□ 0.17
SREBF1-223ENST00000584760 FMNL1O95466 1100 aaPredicted RBP16.14■□□□□ 0.17
SREBF1-223ENST00000584760 METTL16Q86W50 562 aaKnown RBP16.14■□□□□ 0.17
SREBF1-223ENST00000584760 RAET1EQ8TD07 263 aa16.14■□□□□ 0.17
SREBF1-223ENST00000584760 DNAJC18Q9H819 358 aa16.14■□□□□ 0.17
SREBF1-223ENST00000584760 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.14■□□□□ 0.17
SREBF1-223ENST00000584760 PICK1Q9NRD5 415 aa16.14■□□□□ 0.17
SREBF1-223ENST00000584760 ECHDC1Q9NTX5 307 aa16.14■□□□□ 0.17
SREBF1-223ENST00000584760 PI4KBQ9UBF8 816 aa16.14■□□□□ 0.17
SREBF1-223ENST00000584760 BIN2Q9UBW5 565 aaPredicted RBP16.14■□□□□ 0.17
SREBF1-223ENST00000584760 ZNF532Q9HCE3 1301 aa16.14■□□□□ 0.17
SREBF1-223ENST00000584760 BRCA2P51587 3418 aa16.13■□□□□ 0.17
SREBF1-223ENST00000584760 PDHXO00330 501 aa16.13■□□□□ 0.17
SREBF1-223ENST00000584760 OSBPP22059 807 aa16.13■□□□□ 0.17
SREBF1-223ENST00000584760 HOXD10P28358 340 aa16.13■□□□□ 0.17
SREBF1-223ENST00000584760 GRK4P32298 578 aa16.13■□□□□ 0.17
SREBF1-223ENST00000584760 MOGSQ13724 837 aa16.13■□□□□ 0.17
SREBF1-223ENST00000584760 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.13■□□□□ 0.17
SREBF1-223ENST00000584760 PALD1Q9ULE6 856 aa16.13■□□□□ 0.17
SREBF1-223ENST00000584760 CCL5P13501 91 aa16.12■□□□□ 0.17
SREBF1-223ENST00000584760 ADD2P35612 726 aa16.12■□□□□ 0.17
SREBF1-223ENST00000584760 RRP1BQ14684 758 aaKnown RBP16.12■□□□□ 0.17
SREBF1-223ENST00000584760 ANKRD23Q86SG2 305 aa16.12■□□□□ 0.17
SREBF1-223ENST00000584760 NKX2-3Q8TAU0 364 aa16.12■□□□□ 0.17
SREBF1-223ENST00000584760 SAP30BPQ9UHR5 308 aaKnown RBP16.12■□□□□ 0.17
SREBF1-223ENST00000584760 AFG3L2Q9Y4W6 797 aa16.12■□□□□ 0.17
SREBF1-223ENST00000584760 ZHX2Q9Y6X8 837 aa16.12■□□□□ 0.17
SREBF1-223ENST00000584760 A0A0G2JLL6 359 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms